Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo

Detalhes bibliográficos
Autor(a) principal: Ebone, André
Data de Publicação: 2021
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Manancial - Repositório Digital da UFSM
dARK ID: ark:/26339/001300000jpfq
Texto Completo: http://repositorio.ufsm.br/handle/1/23035
Resumo: Wheat (Triticum aestivum L.) has relevance throughout history for its high consumption in the diet. High yield potential requires the adoption of more careful management, especially for diseases susceptible cultivars. The objective of the research was to phenotyping wheat cultivars for sensitivity to tan spot, by proximal imaging, and to identify biochemical responses as an indicator of early infection by Pyrenophora tritici-repentis. Two field experiments were carried out in Santa Maria (SM) and Ijuí (IJ) with 4 wheat cultivars (Tbio Toruk, Tbio Sinuelo, Tbio Audaz and Tbio Sossego), with and without inoculation of the fungus Pyrenophora tritici- repentis. Grain yield, mass per hectoliter and mass of a thousand grains were evaluated, in addition to visual and photography severity (at the SM site) using the Quant® software determined at 7, 14, 21, 28, 35 and 42 days after inoculation (DAI) to compose the area under the disease progress curve (AADPC) in each cultivar. An experiment was carried out in a greenhouse to evaluate the photosynthetic pigments and biochemical compounds of the antioxidant complex in plants at 0, 24, 48, 96 and 192 hours after inoculation (HAI) with Pyrenophora tritici-repentis. The content of Chlorophyll A (ChlA), Chlorophyll B (ChlB), Total Chlorophylls (ChlTot), Carotenoids (Carot), Hydrogen Peroxide (H2O2), lipid peroxidation (TBARS), Superoxide Dismutase (SOD) and Guaiacol Peroxidase (POD), were determined in relation to the control, without the pathogen, for all the cultivars. The lowest averages of severity of tan spot and AADPC were identified in the cultivars Tbio Sossego and Tbio Audaz, with no inverse correlation observed in the increase in grain yields, indicating that the yield components are not indicators of tolerance to the tan spot. The relative tolerance levels for each cultivar are related to the decrease in the disease's AADPC. Thus, phenotypically Tbio Toruk was classified as sensitive to tan spot for presenting greater AADPC, while the most tolerant was Tbio Sossego, in both locations. The principal component analysis (PCA) defines the difference between the cultivars Tbio Toruk and Tbio Sossego as 192 HAI, due to the stimuli accumulation after inoculation with the pathogen. The average decrease in accuracy in the classification of cultivars was greater for POD, this evaluation being responsible for 24% of the predictive model by RandomForest at 96 HAI. In the confusion matrix, classification model showed 100% of the sensitivity (SN) to the predictions of Tbio Toruk. A maximum relative expression of POD indicated for Tbio Toruk occurred as 126 HAI, with activity 386.9% higher than the control not inoculated with Pyrenophora tritici-repentis. Thus, the wheat cultivars were phenotyped and Tbio Toruk being a cultivar more susceptible to tan spot because demonstrated highest AADPC values. The detection of changes in enzyme responses until to 96 HAI, especially the activity of the POD enzyme, is an indicator for early detection of infection by Pyrenophora tritici-repentis in sensitive cultivars.
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spelling Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigoPhenotyping in the early detection of symptoms caused by Pyrenophora tritici-repentis in wheatMancha amarelaAnálise dos componentes principaisAtividade enzimáticaGuaiacol peroxidaseTan spotPrincipal component analysisEnzymatic activityGuaiacol peroxidaseCNPQ::CIENCIAS AGRARIAS::AGRONOMIAWheat (Triticum aestivum L.) has relevance throughout history for its high consumption in the diet. High yield potential requires the adoption of more careful management, especially for diseases susceptible cultivars. The objective of the research was to phenotyping wheat cultivars for sensitivity to tan spot, by proximal imaging, and to identify biochemical responses as an indicator of early infection by Pyrenophora tritici-repentis. Two field experiments were carried out in Santa Maria (SM) and Ijuí (IJ) with 4 wheat cultivars (Tbio Toruk, Tbio Sinuelo, Tbio Audaz and Tbio Sossego), with and without inoculation of the fungus Pyrenophora tritici- repentis. Grain yield, mass per hectoliter and mass of a thousand grains were evaluated, in addition to visual and photography severity (at the SM site) using the Quant® software determined at 7, 14, 21, 28, 35 and 42 days after inoculation (DAI) to compose the area under the disease progress curve (AADPC) in each cultivar. An experiment was carried out in a greenhouse to evaluate the photosynthetic pigments and biochemical compounds of the antioxidant complex in plants at 0, 24, 48, 96 and 192 hours after inoculation (HAI) with Pyrenophora tritici-repentis. The content of Chlorophyll A (ChlA), Chlorophyll B (ChlB), Total Chlorophylls (ChlTot), Carotenoids (Carot), Hydrogen Peroxide (H2O2), lipid peroxidation (TBARS), Superoxide Dismutase (SOD) and Guaiacol Peroxidase (POD), were determined in relation to the control, without the pathogen, for all the cultivars. The lowest averages of severity of tan spot and AADPC were identified in the cultivars Tbio Sossego and Tbio Audaz, with no inverse correlation observed in the increase in grain yields, indicating that the yield components are not indicators of tolerance to the tan spot. The relative tolerance levels for each cultivar are related to the decrease in the disease's AADPC. Thus, phenotypically Tbio Toruk was classified as sensitive to tan spot for presenting greater AADPC, while the most tolerant was Tbio Sossego, in both locations. The principal component analysis (PCA) defines the difference between the cultivars Tbio Toruk and Tbio Sossego as 192 HAI, due to the stimuli accumulation after inoculation with the pathogen. The average decrease in accuracy in the classification of cultivars was greater for POD, this evaluation being responsible for 24% of the predictive model by RandomForest at 96 HAI. In the confusion matrix, classification model showed 100% of the sensitivity (SN) to the predictions of Tbio Toruk. A maximum relative expression of POD indicated for Tbio Toruk occurred as 126 HAI, with activity 386.9% higher than the control not inoculated with Pyrenophora tritici-repentis. Thus, the wheat cultivars were phenotyped and Tbio Toruk being a cultivar more susceptible to tan spot because demonstrated highest AADPC values. The detection of changes in enzyme responses until to 96 HAI, especially the activity of the POD enzyme, is an indicator for early detection of infection by Pyrenophora tritici-repentis in sensitive cultivars.O trigo (Triticum aestivum L.) possui relevância ao longo da história pelo seu alto consumo na dieta alimentar. Alto potencial produtivo exige adoção de manejo mais criterioso, especialmente para cultivares suscetíveis a doenças. O objetivo da pesquisa foi fenotipar cultivares de trigo quanto a sensibilidade a mancha amarela, por meio de imagem, e identificar respostas bioquímicas como indicadoras de infecção precoce por Pyrenophora tritici-repentis. Foram conduzidos experimentos de campo em Santa Maria (SM) e Ijuí (IJ) com avaliação de 4 cultivares de trigo (Tbio Toruk, Tbio Sinuelo, Tbio Audaz e Tbio Sossego), com e sem inoculação do fungo Pyrenophora tritici-repentis. Foram avaliadas produtividade de grãos, massa por hectolitro e massa de mil grãos, além da determinação da severidade visual e por imagem (no local SM) com o uso do software Quant® aos 7, 14, 21, 28, 35 e 42 dias após a inoculação (DAI) para compor a área abaixo da curva de progresso da doença (AACPD) em cada cultivar. Em casa de vegetação foi conduzido experimento para avaliar os pigmentos fotossintetizantes e compostos bioquímicos do complexo antioxidante em plantas as 0, 24, 48, 96 e 192 horas após a inoculação (HAI) com Pyrenophora tritici-repentis. O conteúdo de Clorofila A (ChlA), Clorofila B (ChlB), Clorofilas Totais (ChlTot), Carotenoides (Carot), Peróxido de Hidrogênio (H2O2), peroxidação lipídica (TBARS), Superóxido Dismutase (SOD) e Guaiacol Peroxidase (POD), foram determinadas em relação ao seu controle, sem o patógeno, para todas as cultivares. As menores médias de severidades de mancha amarela e AACPD foram identificadas nas cultivares Tbio Sossego e Tbio Audaz, não sendo observada correlação inversa no aumento nas produtividades de grãos, indicando que os componentes de produtividade não são indicadores de tolerância à mancha amarela. Os níveis relativos de tolerância para cada cultivar estão relacionados com a diminuição da AACPD da doença. Assim, fenotipicamente Tbio Toruk foi classificado como sensível a mancha amarela por apresentar maior AACPD, enquanto a mais tolerante foi Tbio Sossego, em ambos os locais. A análise dos componentes principais demonstrou diferença entre as cultivares Tbio Toruk e Tbio Sossego as 192 HAI, pelo acúmulo de estímulos após a inoculação com o patógeno. O decréscimo médio de acurácia na classificação das cultivares foi maior para POD, sendo esta avaliação responsável por 24% do modelo preditivo por RamdomForest a 96 HAI. A sensibilidade (SN) na matriz de confusão do modelo permitiu classificar Tbio Toruk em 100% das predições. A máxima expressão relativa de POD determinada para Tbio Toruk ocorreu as 126 horas após a inoculação, com atividade 386,9% superiores ao controle não inoculado com Pyrenophora tritici-repentis. Assim, as cultivares de trigo foram fenotipadas, sendo Tbio Toruk a cultivar mais suscetível a mancha amarela devido demonstrar elevada AACPD. A detecção de alterações nas respostas enzimáticas até 96 HAI, especialmente a atividade da enzima POD é um indicador para detecção precoce à infecção por Pyrenophora tritici-repentis em cultivares sensíveis.Universidade Federal de Santa MariaBrasilAgronomiaUFSMPrograma de Pós-Graduação em AgronomiaCentro de Ciências RuraisMartin, Thomas Newtonhttp://lattes.cnpq.br/6293291442552572Tabaldi, Luciane AlmeriSantana, Flávio MartinsEbone, André2021-11-29T12:35:28Z2021-11-29T12:35:28Z2021-04-22info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/23035ark:/26339/001300000jpfqporAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2021-12-30T14:01:49Zoai:repositorio.ufsm.br:1/23035Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2021-12-30T14:01:49Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
Phenotyping in the early detection of symptoms caused by Pyrenophora tritici-repentis in wheat
title Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
spellingShingle Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
Ebone, André
Mancha amarela
Análise dos componentes principais
Atividade enzimática
Guaiacol peroxidase
Tan spot
Principal component analysis
Enzymatic activity
Guaiacol peroxidase
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
title_short Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
title_full Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
title_fullStr Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
title_full_unstemmed Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
title_sort Fenotipagem na detecção precoce de sintomas causados por Pyrenophora tritici-repentis em trigo
author Ebone, André
author_facet Ebone, André
author_role author
dc.contributor.none.fl_str_mv Martin, Thomas Newton
http://lattes.cnpq.br/6293291442552572
Tabaldi, Luciane Almeri
Santana, Flávio Martins
dc.contributor.author.fl_str_mv Ebone, André
dc.subject.por.fl_str_mv Mancha amarela
Análise dos componentes principais
Atividade enzimática
Guaiacol peroxidase
Tan spot
Principal component analysis
Enzymatic activity
Guaiacol peroxidase
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
topic Mancha amarela
Análise dos componentes principais
Atividade enzimática
Guaiacol peroxidase
Tan spot
Principal component analysis
Enzymatic activity
Guaiacol peroxidase
CNPQ::CIENCIAS AGRARIAS::AGRONOMIA
description Wheat (Triticum aestivum L.) has relevance throughout history for its high consumption in the diet. High yield potential requires the adoption of more careful management, especially for diseases susceptible cultivars. The objective of the research was to phenotyping wheat cultivars for sensitivity to tan spot, by proximal imaging, and to identify biochemical responses as an indicator of early infection by Pyrenophora tritici-repentis. Two field experiments were carried out in Santa Maria (SM) and Ijuí (IJ) with 4 wheat cultivars (Tbio Toruk, Tbio Sinuelo, Tbio Audaz and Tbio Sossego), with and without inoculation of the fungus Pyrenophora tritici- repentis. Grain yield, mass per hectoliter and mass of a thousand grains were evaluated, in addition to visual and photography severity (at the SM site) using the Quant® software determined at 7, 14, 21, 28, 35 and 42 days after inoculation (DAI) to compose the area under the disease progress curve (AADPC) in each cultivar. An experiment was carried out in a greenhouse to evaluate the photosynthetic pigments and biochemical compounds of the antioxidant complex in plants at 0, 24, 48, 96 and 192 hours after inoculation (HAI) with Pyrenophora tritici-repentis. The content of Chlorophyll A (ChlA), Chlorophyll B (ChlB), Total Chlorophylls (ChlTot), Carotenoids (Carot), Hydrogen Peroxide (H2O2), lipid peroxidation (TBARS), Superoxide Dismutase (SOD) and Guaiacol Peroxidase (POD), were determined in relation to the control, without the pathogen, for all the cultivars. The lowest averages of severity of tan spot and AADPC were identified in the cultivars Tbio Sossego and Tbio Audaz, with no inverse correlation observed in the increase in grain yields, indicating that the yield components are not indicators of tolerance to the tan spot. The relative tolerance levels for each cultivar are related to the decrease in the disease's AADPC. Thus, phenotypically Tbio Toruk was classified as sensitive to tan spot for presenting greater AADPC, while the most tolerant was Tbio Sossego, in both locations. The principal component analysis (PCA) defines the difference between the cultivars Tbio Toruk and Tbio Sossego as 192 HAI, due to the stimuli accumulation after inoculation with the pathogen. The average decrease in accuracy in the classification of cultivars was greater for POD, this evaluation being responsible for 24% of the predictive model by RandomForest at 96 HAI. In the confusion matrix, classification model showed 100% of the sensitivity (SN) to the predictions of Tbio Toruk. A maximum relative expression of POD indicated for Tbio Toruk occurred as 126 HAI, with activity 386.9% higher than the control not inoculated with Pyrenophora tritici-repentis. Thus, the wheat cultivars were phenotyped and Tbio Toruk being a cultivar more susceptible to tan spot because demonstrated highest AADPC values. The detection of changes in enzyme responses until to 96 HAI, especially the activity of the POD enzyme, is an indicator for early detection of infection by Pyrenophora tritici-repentis in sensitive cultivars.
publishDate 2021
dc.date.none.fl_str_mv 2021-11-29T12:35:28Z
2021-11-29T12:35:28Z
2021-04-22
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/23035
dc.identifier.dark.fl_str_mv ark:/26339/001300000jpfq
url http://repositorio.ufsm.br/handle/1/23035
identifier_str_mv ark:/26339/001300000jpfq
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Agronomia
UFSM
Programa de Pós-Graduação em Agronomia
Centro de Ciências Rurais
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Agronomia
UFSM
Programa de Pós-Graduação em Agronomia
Centro de Ciências Rurais
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
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institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com
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