Otimização dos processos de calibração e validação do modelo cropgro-soybean

Detalhes bibliográficos
Autor(a) principal: Fensterseifer, Cesar Augusto Jarutais
Data de Publicação: 2016
Tipo de documento: Tese
Idioma: por
Título da fonte: Manancial - Repositório Digital da UFSM
Texto Completo: http://repositorio.ufsm.br/handle/1/11661
Resumo: Crop models are important tools to improve the management and yield of agricultural systems. These improvements are helpful to meet the growing food and fuel demand without increase the crop areas. The conventional approach for calibrating/validating a crop model considers few to many experiments. However, few experiments could lead to higher uncertainties and a large number of experiments is too expensive. Traditionally, the classical procedure use to share an experimental dataset one part to calibrate and the other to validate the model. However, if only few experiments are available, split it could increase the uncertainties on simulation performance. On the other hand, to calibrate/validate the model using several experiments is too expensive and time consuming. Methods that can optimize these procedures, decreasing the processing time and costs, with a reliable performance are always welcome. The first chapter of this study was conducted to evaluate and compare a statistically robust method with the classical calibration/validation procedure. These two procedure, were applied to estimate the genetic coefficients of the CROPGRO-soybean model, using multiple experiments. The cross-validation leave-one-out method, was applied to 21 experiments, using the NA 5909 RG variety, across a southern state of Brazil. The cross-validation reduced the classical calibration/validation procedure average RMSE from 2.6, 4.6, 4.8, 7.3, 10.2, 677 and 551 to 1.1, 4.1, 4.1, 6.2, 6.3, 347 and 447 for emergence, R1, R3, R5, R7 (days), grains.m-2 and kg.ha-1, respectively. There was stability in the estimated ecotype and genetic coefficient among the 21 experiments. Considering the wide range of environment conditions, the CROPGRO-soybean model provided robust predictions of phenology, biomass and grain yield. Finally, to improve the calibration/validation procedure performance, the cross-validation method should be used whenever possible. For the second chapter of this study, the main objectives were to evaluate the calibration/validation uncertainties using different numbers of experiments and to find out the minimum number of experiments required for a reliable CROPGRO-Soybean simulation. This study also used 21 field experiments (BMX Potencia RR variety) sown in eight different locations of Southern Brazil between 2010 and 2014. The experiments were grouped in four classes (Individual sowings, season/year per location, experimental sites, and all data together). As the grouping level increase, the developmental stages RRMSE (%), decreased from 22.2% to 7.8% from individual sowings to all data together, respectively. The use of only one individual sowings experiment could lead to a RRMSE of 28.4, 48, and 36% for R1, LAI and yield, respectively. However, the largest decrease occurred from the individual sowings to the season/year per location. Then, is recommended, use at least the season/year per location (early, recommended and late sowing dates) class. It will allow understand the behavior of the variety, avoiding the high costs of several experiments and keeping a reliable performance of the model.
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spelling Otimização dos processos de calibração e validação do modelo cropgro-soybeanOptimization of the cropgro-soybean model calibration and validation processesCROPGRO-SoybeanModelo agrícolaCross-validationCrop modelCross-validationCNPQ::CIENCIAS AGRARIAS::ENGENHARIA AGRICOLACrop models are important tools to improve the management and yield of agricultural systems. These improvements are helpful to meet the growing food and fuel demand without increase the crop areas. The conventional approach for calibrating/validating a crop model considers few to many experiments. However, few experiments could lead to higher uncertainties and a large number of experiments is too expensive. Traditionally, the classical procedure use to share an experimental dataset one part to calibrate and the other to validate the model. However, if only few experiments are available, split it could increase the uncertainties on simulation performance. On the other hand, to calibrate/validate the model using several experiments is too expensive and time consuming. Methods that can optimize these procedures, decreasing the processing time and costs, with a reliable performance are always welcome. The first chapter of this study was conducted to evaluate and compare a statistically robust method with the classical calibration/validation procedure. These two procedure, were applied to estimate the genetic coefficients of the CROPGRO-soybean model, using multiple experiments. The cross-validation leave-one-out method, was applied to 21 experiments, using the NA 5909 RG variety, across a southern state of Brazil. The cross-validation reduced the classical calibration/validation procedure average RMSE from 2.6, 4.6, 4.8, 7.3, 10.2, 677 and 551 to 1.1, 4.1, 4.1, 6.2, 6.3, 347 and 447 for emergence, R1, R3, R5, R7 (days), grains.m-2 and kg.ha-1, respectively. There was stability in the estimated ecotype and genetic coefficient among the 21 experiments. Considering the wide range of environment conditions, the CROPGRO-soybean model provided robust predictions of phenology, biomass and grain yield. Finally, to improve the calibration/validation procedure performance, the cross-validation method should be used whenever possible. For the second chapter of this study, the main objectives were to evaluate the calibration/validation uncertainties using different numbers of experiments and to find out the minimum number of experiments required for a reliable CROPGRO-Soybean simulation. This study also used 21 field experiments (BMX Potencia RR variety) sown in eight different locations of Southern Brazil between 2010 and 2014. The experiments were grouped in four classes (Individual sowings, season/year per location, experimental sites, and all data together). As the grouping level increase, the developmental stages RRMSE (%), decreased from 22.2% to 7.8% from individual sowings to all data together, respectively. The use of only one individual sowings experiment could lead to a RRMSE of 28.4, 48, and 36% for R1, LAI and yield, respectively. However, the largest decrease occurred from the individual sowings to the season/year per location. Then, is recommended, use at least the season/year per location (early, recommended and late sowing dates) class. It will allow understand the behavior of the variety, avoiding the high costs of several experiments and keeping a reliable performance of the model.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESModelos agrícolas são ferramentas importantes para aprimorar técnicas de manejo e consequentemente a eficiência dos sistemas agrícolas. Esse acréscimo na eficiência são úteis para atender a crescente demanda de alimentos e combustíveis, sem avançar a fronteira agrícola. A calibração e validação de um modelo agrícola, historicamente considerou conjuntos de dados que variam de poucos á muitos experimentos. Poucos experimentos podem aumentar as incertezas e muitos experimentos tem alto custo financeiro e demanda de tempo. Pelo método de partição em dois grupos, o conjunto de experimentos é dividido em duas partes, uma para calibrar e a outra validar o modelo. Se apenas um conjunto pequeno de experimentos está disponível, dividi-los pode prejudicar o desempenho do modelo. Assim, métodos que otimizem esses processos, diminuindo o tempo e o custo de experimentos necessários para a calibração e validação, são sempre bem vindos. O objetivo do primeiro capítulo desta tese, foi comparar o método tradicionalmente utilizado na calibração e validação de modelos com um método mais robusto (cross-validation). Ambos os métodos foram aplicados para estimar os coeficientes genéticos na calibração e validação do modelo CROPGRO-soybean, utilizando múltiplos experimentos. Um conjunto com os 3 experimentos mais detalhados foram utilizados para calibração utilizando o método de partição em dois grupos. Já o método cross-validation, foi aplicado utilizando 21 experimentos. A cultivar NA5909 RG foi selecionada por ser uma das mais cultivadas no sul do Brasil nos últimos 5 anos, conduzida em experimentos distribuídos em oitos locais do Estado do Rio Grande do Sul durante as safras de 2010/2011 ate 2013/2014. O método cross-validation reduziu os RMSEs encontrados no método tradicionalmente utilizado de 2.6, 4.6, 4.8, 7.3, 10.2, 677 e 551 para 1.1, 4.1, 4.1, 6.2, 6.3, 347 e 447 para emergência, R1, R3, R5, R7 (em dias), grãos.m-2 e kg.ha-1, respectivamente. Foi observado estabilidade na maioria das estimativas de coeficientes genéticos, o que sugere a possibilidade de utilizar um menor número de experimentos no processo. Considerando a ampla faixa de condições ambientais, o modelo apresentou desempenho satisfatório na previsão fenológica, de biomassa e produtividade. Para otimizar os processos de calibração e validação, indica-se que o método cross-validation seja utilizado sempre que possível. No segundo capítulo, o principal objetivo foi avaliar o desempenho do uso de diferentes números de experimentos, e estimar o número mínimo necessário para garantir desempenho satisfatório do modelo CROPGRO-soybean. Esse estudo também utilizou 21 experimentos, com a cultivar BMX Potência RR. Os experimentos foram organizados em quatro grupos: Grupo 1 (semeaduras individuais), grupo 2 (ano agrícola por local), grupo 3 (local experimental) e grupo 4 (todos os experimentos juntos). Conforme o número de experimentos aumentou, a variabilidade dos coeficientes e os erros relativos (RRMSE) diminuíram. O primeiro grupo apresentou os maiores erros relativos, com até 28.4, 48 e 36% de erros nas simulações de R1, IAF e produtividade, respectivamente. O maior decréscimo nos erros relativos, ocorreu quando avançamos do grupo 1 para o grupo 2. Em alguns casos os erros foram reduzidos em mais que duas vezes. Assim, considerando o elevado custo financeiro e a demanda de tempo que os grupos 3 e 4 apresentam, recomenda-se a escolha de pelo menos o grupo 2, com 3 experimentos no mesmo ano agrícola. Essa estratégia vai permitir um melhor entendimento sobre o desempenho da cultivar, além de calibrar e validar o modelo CROPGRO-soybean, evitando os altos custos de vários experimentos, garantindo o desempenho satisfatório do modelo.Universidade Federal de Santa MariaBrasilEngenharia AgrícolaUFSMPrograma de Pós-Graduação em Engenharia AgrícolaCentro de Ciências RuraisStreck, Nereu Augustohttp://lattes.cnpq.br/8121082379157248Dalmago, Genei Antôniohttp://lattes.cnpq.br/2263299492447689Radin, Bernadetehttp://lattes.cnpq.br/6423770817865916Swarowsky, Alexandrehttp://lattes.cnpq.br/9525157123018041Heldwein, Arno Bernarndohttp://lattes.cnpq.br/6671155842231311Fensterseifer, Cesar Augusto Jarutais2017-09-13T12:30:31Z2017-09-13T12:30:31Z2016-12-06info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/11661porAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2022-06-27T12:05:37Zoai:repositorio.ufsm.br:1/11661Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2022-06-27T12:05:37Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Otimização dos processos de calibração e validação do modelo cropgro-soybean
Optimization of the cropgro-soybean model calibration and validation processes
title Otimização dos processos de calibração e validação do modelo cropgro-soybean
spellingShingle Otimização dos processos de calibração e validação do modelo cropgro-soybean
Fensterseifer, Cesar Augusto Jarutais
CROPGRO-Soybean
Modelo agrícola
Cross-validation
Crop model
Cross-validation
CNPQ::CIENCIAS AGRARIAS::ENGENHARIA AGRICOLA
title_short Otimização dos processos de calibração e validação do modelo cropgro-soybean
title_full Otimização dos processos de calibração e validação do modelo cropgro-soybean
title_fullStr Otimização dos processos de calibração e validação do modelo cropgro-soybean
title_full_unstemmed Otimização dos processos de calibração e validação do modelo cropgro-soybean
title_sort Otimização dos processos de calibração e validação do modelo cropgro-soybean
author Fensterseifer, Cesar Augusto Jarutais
author_facet Fensterseifer, Cesar Augusto Jarutais
author_role author
dc.contributor.none.fl_str_mv Streck, Nereu Augusto
http://lattes.cnpq.br/8121082379157248
Dalmago, Genei Antônio
http://lattes.cnpq.br/2263299492447689
Radin, Bernadete
http://lattes.cnpq.br/6423770817865916
Swarowsky, Alexandre
http://lattes.cnpq.br/9525157123018041
Heldwein, Arno Bernarndo
http://lattes.cnpq.br/6671155842231311
dc.contributor.author.fl_str_mv Fensterseifer, Cesar Augusto Jarutais
dc.subject.por.fl_str_mv CROPGRO-Soybean
Modelo agrícola
Cross-validation
Crop model
Cross-validation
CNPQ::CIENCIAS AGRARIAS::ENGENHARIA AGRICOLA
topic CROPGRO-Soybean
Modelo agrícola
Cross-validation
Crop model
Cross-validation
CNPQ::CIENCIAS AGRARIAS::ENGENHARIA AGRICOLA
description Crop models are important tools to improve the management and yield of agricultural systems. These improvements are helpful to meet the growing food and fuel demand without increase the crop areas. The conventional approach for calibrating/validating a crop model considers few to many experiments. However, few experiments could lead to higher uncertainties and a large number of experiments is too expensive. Traditionally, the classical procedure use to share an experimental dataset one part to calibrate and the other to validate the model. However, if only few experiments are available, split it could increase the uncertainties on simulation performance. On the other hand, to calibrate/validate the model using several experiments is too expensive and time consuming. Methods that can optimize these procedures, decreasing the processing time and costs, with a reliable performance are always welcome. The first chapter of this study was conducted to evaluate and compare a statistically robust method with the classical calibration/validation procedure. These two procedure, were applied to estimate the genetic coefficients of the CROPGRO-soybean model, using multiple experiments. The cross-validation leave-one-out method, was applied to 21 experiments, using the NA 5909 RG variety, across a southern state of Brazil. The cross-validation reduced the classical calibration/validation procedure average RMSE from 2.6, 4.6, 4.8, 7.3, 10.2, 677 and 551 to 1.1, 4.1, 4.1, 6.2, 6.3, 347 and 447 for emergence, R1, R3, R5, R7 (days), grains.m-2 and kg.ha-1, respectively. There was stability in the estimated ecotype and genetic coefficient among the 21 experiments. Considering the wide range of environment conditions, the CROPGRO-soybean model provided robust predictions of phenology, biomass and grain yield. Finally, to improve the calibration/validation procedure performance, the cross-validation method should be used whenever possible. For the second chapter of this study, the main objectives were to evaluate the calibration/validation uncertainties using different numbers of experiments and to find out the minimum number of experiments required for a reliable CROPGRO-Soybean simulation. This study also used 21 field experiments (BMX Potencia RR variety) sown in eight different locations of Southern Brazil between 2010 and 2014. The experiments were grouped in four classes (Individual sowings, season/year per location, experimental sites, and all data together). As the grouping level increase, the developmental stages RRMSE (%), decreased from 22.2% to 7.8% from individual sowings to all data together, respectively. The use of only one individual sowings experiment could lead to a RRMSE of 28.4, 48, and 36% for R1, LAI and yield, respectively. However, the largest decrease occurred from the individual sowings to the season/year per location. Then, is recommended, use at least the season/year per location (early, recommended and late sowing dates) class. It will allow understand the behavior of the variety, avoiding the high costs of several experiments and keeping a reliable performance of the model.
publishDate 2016
dc.date.none.fl_str_mv 2016-12-06
2017-09-13T12:30:31Z
2017-09-13T12:30:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/11661
url http://repositorio.ufsm.br/handle/1/11661
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Engenharia Agrícola
UFSM
Programa de Pós-Graduação em Engenharia Agrícola
Centro de Ciências Rurais
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Engenharia Agrícola
UFSM
Programa de Pós-Graduação em Engenharia Agrícola
Centro de Ciências Rurais
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
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institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com
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