Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila
Autor(a) principal: | |
---|---|
Data de Publicação: | 2017 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Manancial - Repositório Digital da UFSM |
dARK ID: | ark:/26339/0013000007gw9 |
Texto Completo: | http://repositorio.ufsm.br/handle/1/14372 |
Resumo: | This work presents the study of the supramolecular environment in multicomponent crystals. Multicomponent crystals were defined by J. D. Dunitz as a crystal containing two or more components together, so that this concept includes cocristais and solvates, these being the molecular models of study in this dissertation. In the first chapter the supramolecular environment of cocristais based on π•••π interactions were studied through the analysis of 10 structures of cocristais already deposited in CCDC database, in addition to its coformers. All cocristals are formed by a halogenated aromatic coformer (octafluoraphthalene, hexafluorobenzene or decafluorobiphenyl) and a polyaromatic or heterocyclic coformer. The electrostatic potential maps of individual coformers demonstrated the electrostatic complementarity between the two components. The coformers and their respective cocristals were evaluated using the methodology of the supramolecular cluster, where the dimers were analyzed by quantum mechanics calculations and the Quantum Theatrical Theory in Molecules data. Intermolecular interactions were hierarchized according to their energies and mechanisms of crystallization were proposed for cocristals and coformers. The analysis of the self-assembly in the coformers and hetero-assembly in the cocrystals resulted in a approach for the formation of cocristals involving π systems. The approach states that "When π systems do not make ππ interactions on the mains dimers (first hierarchies), self-assembly in the coformers, this systems are free to form cocristas based on these interactions." To examine the validity of the approach created a series of heterocycles available in our research group were taken to tests for cocrystallization. Only the self-association of the coformers was evidenced due to the fact that they present ππ interactions in the main dimers, following the trend of the approach created. This work is of extreme importance because its create a simple criteria to select the coformers for the synthesis of cocristais, avoiding the time spent in the laboratory by random combinations. It can be said that, in general, before carrying out a combination for the synthesis of cocristals, it is necessary to analyze the supramolecular cluster of the coformers, if they have CHπ-type interactions in the main dimers they are strong candidates for the synthesis of cocristals. In the second chapter, Ethyl-1,5-Diary-1H-pyrazole-3-carboxilates were used as model compounds for study. The selected compounds have different substituents at the 5-position of the pyrazoline ring (-C6H4-F or -C6H4-Cl), one of which is still obtained as solvate (with water molecules), which made it possible to study the substituents effects and the water molecule effects on the crystalline packing. For the study of the supramolecular environment, the supramolecular cluster was determined through the appropriate methodology and all the dimers were analyzed by calculations of quantum mechanics and data of the Quantum Theatrical Theory in Molecules. Intermolecular interactions were hierarchized according to their energies and crystallization mechanisms were proposed. Based on the proposed crystallization mechanisms, it was possible to show in which stage the water molecules were added to the supramolecular cluster. In addition, this study demonstrated that the change in substituent at the 5-position of the pyrazoline ring, as well as the presence of water, affected the crystalline packing of the compounds, from the first supramolecular dimers. Although water molecules aggregate to the supramolecular cluster only in the fourth hierarchy of interaction, the change in crystalline packing when compared to the solvate molecule and the unsolvated molecule suggests the existence of a balance between the two forms in solution. |
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Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etilaEnergy and topological effects on the design of cocrystals of aromatic compounds and ethyl 1,5-diary-1h-pyrazole-3- carboxylatesCristais multicomponentesInterações intermolecularesCluster supramolecularCompostos aromáticosPirazóisMulticomponent crystalsIntermolecular interactionsSupramolecular clusterAromatic compoundsPyrazolesCNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICAThis work presents the study of the supramolecular environment in multicomponent crystals. Multicomponent crystals were defined by J. D. Dunitz as a crystal containing two or more components together, so that this concept includes cocristais and solvates, these being the molecular models of study in this dissertation. In the first chapter the supramolecular environment of cocristais based on π•••π interactions were studied through the analysis of 10 structures of cocristais already deposited in CCDC database, in addition to its coformers. All cocristals are formed by a halogenated aromatic coformer (octafluoraphthalene, hexafluorobenzene or decafluorobiphenyl) and a polyaromatic or heterocyclic coformer. The electrostatic potential maps of individual coformers demonstrated the electrostatic complementarity between the two components. The coformers and their respective cocristals were evaluated using the methodology of the supramolecular cluster, where the dimers were analyzed by quantum mechanics calculations and the Quantum Theatrical Theory in Molecules data. Intermolecular interactions were hierarchized according to their energies and mechanisms of crystallization were proposed for cocristals and coformers. The analysis of the self-assembly in the coformers and hetero-assembly in the cocrystals resulted in a approach for the formation of cocristals involving π systems. The approach states that "When π systems do not make ππ interactions on the mains dimers (first hierarchies), self-assembly in the coformers, this systems are free to form cocristas based on these interactions." To examine the validity of the approach created a series of heterocycles available in our research group were taken to tests for cocrystallization. Only the self-association of the coformers was evidenced due to the fact that they present ππ interactions in the main dimers, following the trend of the approach created. This work is of extreme importance because its create a simple criteria to select the coformers for the synthesis of cocristais, avoiding the time spent in the laboratory by random combinations. It can be said that, in general, before carrying out a combination for the synthesis of cocristals, it is necessary to analyze the supramolecular cluster of the coformers, if they have CHπ-type interactions in the main dimers they are strong candidates for the synthesis of cocristals. In the second chapter, Ethyl-1,5-Diary-1H-pyrazole-3-carboxilates were used as model compounds for study. The selected compounds have different substituents at the 5-position of the pyrazoline ring (-C6H4-F or -C6H4-Cl), one of which is still obtained as solvate (with water molecules), which made it possible to study the substituents effects and the water molecule effects on the crystalline packing. For the study of the supramolecular environment, the supramolecular cluster was determined through the appropriate methodology and all the dimers were analyzed by calculations of quantum mechanics and data of the Quantum Theatrical Theory in Molecules. Intermolecular interactions were hierarchized according to their energies and crystallization mechanisms were proposed. Based on the proposed crystallization mechanisms, it was possible to show in which stage the water molecules were added to the supramolecular cluster. In addition, this study demonstrated that the change in substituent at the 5-position of the pyrazoline ring, as well as the presence of water, affected the crystalline packing of the compounds, from the first supramolecular dimers. Although water molecules aggregate to the supramolecular cluster only in the fourth hierarchy of interaction, the change in crystalline packing when compared to the solvate molecule and the unsolvated molecule suggests the existence of a balance between the two forms in solution.Conselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqO presente trabalho apresenta o estudo do ambiente supramolecular em cristais multicomponentes. Cristais multicomponentes foram definidos por J. D. Dunitz, como um cristal contendo dois ou mais componentes juntos, de forma que esse conceito abrange cocristais e solvatos, sendo esses os modelos moleculares de estudo nessa dissertação. No primeiro capítulo, o ambiente supramolecular de cocristais baseados em interações π•••π foram estudados através da análise de 10 estruturas de cocristais já depositados no banco de dados do CCDC, além de seus coformadores. Todos os cocristais são formados por um coformador aromático halogenado (octafluornaftaleno, hexafluorbenzeno ou decafluorbisfenil) e um coformador poliaromático ou heterocíclico. Os mapas de potencial eletrostático dos coformadores individuais demonstraram a complementaridade eletrostática entre os dois componentes. Os coformadores e seus respectivos cocristais foram avaliados através da metodologia do cluster supramolecular, onde os dímeros foram analisados por cálculos de mecânica quântica e dados da Teoria Quântica dos Átomos em Moléculas. As interações intermoleculares foram hierarquizadas de acordo com as suas energias e foram propostos mecanismos de cristalização para os cocristais e os coformadores. A análise da autoassociação dos coformadores e da heteroassociação dos cocristais resultou em uma abordagem para a formação de cocristais que envolvam sistemas π. A abordagem diz que: "Quando os sistemas π não fazem interações π•••π nos dímeros principais (primeiras hierarquias), na autoassociação dos coformadores, estes estão livres para formar cocristais baseados nestas interações". Para examinar a validade da abordagem criada, uma série de heterociclos disponíveis no nosso grupo de pesquisa foram levados a testes de cocristalização, onde apenas evidenciou-se a autoassociação dos coformadores devido ao fato de estes apresentarem interações π•••π nos dímeros principais, confirmando, assim, esta abordagem. Esse trabalho é de extrema importância, pois elenca critérios simples para selecionar os coformadores para a síntese de cocristais, evitando o tempo gasto em laboratório por combinações randômicas. Pode-se dizer que, de maneira geral, antes de realizar combinação para a síntese de cocristais deve-se analisar o cluster supramolecular dos coformadores, se estes possuírem interações do tipo CHπ nos dímeros principais são fortes candidatos a síntese de cocristais. No segundo capítulo, foram utilizados como modelos de compostos de estudo 1,5-Diaril-1H-pirazol-3- carboxilatos de etila. Os modelos de compostos selecionados possuem diferentes substituintes na posição 5 do anel pirazolínico (-C6H4-F ou -C6H4-Cl), sendo um deles obtido ainda na forma de solvato (com moléculas de água), os quais tornaram possível evidenciar a mudança dos substituintes e o efeito da molécula de água no empacotamento cristalino. Para o estudo do ambiente supramolecular, foi determinado o cluster supramolecular através da metodologia apropriada e todos os dímeros foram analisados por cálculos de mecânica quântica e dados da Teoria Quântica dos Átomos em Moléculas. As interações intermoleculares foram hierarquizadas de acordo com a suas energias e foram propostos mecanismos de cristalização. Com base nos mecanismos de cristalização propostos, foi possível evidenciar em que etapa as moléculas de água se agregaram ao cluster supramolecular. Além disso, esse estudo demonstrou que a mudança de substituinte na posição 5 do anel pirazolínico, bem como, a presença da água, afetaram o empacotamento cristalino dos compostos, desde os primeiros dímeros supramoleculares. Apesar de as moléculas de água se agregarem ao cluster supramolecular apenas na quarta hierarquia de interação, a mudança no empacotamento cristalino quando comparado à molécula de solvato e a molécula não solvatada sugere a existência de um equilíbrio entre as duas formas em solução.Universidade Federal de Santa MariaBrasilQuímicaUFSMPrograma de Pós-Graduação em QuímicaCentro de Ciências Naturais e ExatasFrizzo, Clarissa Piccininhttp://lattes.cnpq.br/0029279904716491Fiss, Gabriela Fehnhttp://lattes.cnpq.br/8012904041393217Horner, Manfredohttp://lattes.cnpq.br/8922528250830998Belladona, Andrei Lucca2018-09-24T19:32:48Z2018-09-24T19:32:48Z2017-07-20info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/14372ark:/26339/0013000007gw9porAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2018-09-24T19:32:48Zoai:repositorio.ufsm.br:1/14372Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2018-09-24T19:32:48Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false |
dc.title.none.fl_str_mv |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila Energy and topological effects on the design of cocrystals of aromatic compounds and ethyl 1,5-diary-1h-pyrazole-3- carboxylates |
title |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila |
spellingShingle |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila Belladona, Andrei Lucca Cristais multicomponentes Interações intermoleculares Cluster supramolecular Compostos aromáticos Pirazóis Multicomponent crystals Intermolecular interactions Supramolecular cluster Aromatic compounds Pyrazoles CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA |
title_short |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila |
title_full |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila |
title_fullStr |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila |
title_full_unstemmed |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila |
title_sort |
Efeitos energéticos e topológicos no design de cocristais de compostos aromáticos e em 1,5-diaril-1h-pirazol-3-carboxilatos de etila |
author |
Belladona, Andrei Lucca |
author_facet |
Belladona, Andrei Lucca |
author_role |
author |
dc.contributor.none.fl_str_mv |
Frizzo, Clarissa Piccinin http://lattes.cnpq.br/0029279904716491 Fiss, Gabriela Fehn http://lattes.cnpq.br/8012904041393217 Horner, Manfredo http://lattes.cnpq.br/8922528250830998 |
dc.contributor.author.fl_str_mv |
Belladona, Andrei Lucca |
dc.subject.por.fl_str_mv |
Cristais multicomponentes Interações intermoleculares Cluster supramolecular Compostos aromáticos Pirazóis Multicomponent crystals Intermolecular interactions Supramolecular cluster Aromatic compounds Pyrazoles CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA |
topic |
Cristais multicomponentes Interações intermoleculares Cluster supramolecular Compostos aromáticos Pirazóis Multicomponent crystals Intermolecular interactions Supramolecular cluster Aromatic compounds Pyrazoles CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA |
description |
This work presents the study of the supramolecular environment in multicomponent crystals. Multicomponent crystals were defined by J. D. Dunitz as a crystal containing two or more components together, so that this concept includes cocristais and solvates, these being the molecular models of study in this dissertation. In the first chapter the supramolecular environment of cocristais based on π•••π interactions were studied through the analysis of 10 structures of cocristais already deposited in CCDC database, in addition to its coformers. All cocristals are formed by a halogenated aromatic coformer (octafluoraphthalene, hexafluorobenzene or decafluorobiphenyl) and a polyaromatic or heterocyclic coformer. The electrostatic potential maps of individual coformers demonstrated the electrostatic complementarity between the two components. The coformers and their respective cocristals were evaluated using the methodology of the supramolecular cluster, where the dimers were analyzed by quantum mechanics calculations and the Quantum Theatrical Theory in Molecules data. Intermolecular interactions were hierarchized according to their energies and mechanisms of crystallization were proposed for cocristals and coformers. The analysis of the self-assembly in the coformers and hetero-assembly in the cocrystals resulted in a approach for the formation of cocristals involving π systems. The approach states that "When π systems do not make ππ interactions on the mains dimers (first hierarchies), self-assembly in the coformers, this systems are free to form cocristas based on these interactions." To examine the validity of the approach created a series of heterocycles available in our research group were taken to tests for cocrystallization. Only the self-association of the coformers was evidenced due to the fact that they present ππ interactions in the main dimers, following the trend of the approach created. This work is of extreme importance because its create a simple criteria to select the coformers for the synthesis of cocristais, avoiding the time spent in the laboratory by random combinations. It can be said that, in general, before carrying out a combination for the synthesis of cocristals, it is necessary to analyze the supramolecular cluster of the coformers, if they have CHπ-type interactions in the main dimers they are strong candidates for the synthesis of cocristals. In the second chapter, Ethyl-1,5-Diary-1H-pyrazole-3-carboxilates were used as model compounds for study. The selected compounds have different substituents at the 5-position of the pyrazoline ring (-C6H4-F or -C6H4-Cl), one of which is still obtained as solvate (with water molecules), which made it possible to study the substituents effects and the water molecule effects on the crystalline packing. For the study of the supramolecular environment, the supramolecular cluster was determined through the appropriate methodology and all the dimers were analyzed by calculations of quantum mechanics and data of the Quantum Theatrical Theory in Molecules. Intermolecular interactions were hierarchized according to their energies and crystallization mechanisms were proposed. Based on the proposed crystallization mechanisms, it was possible to show in which stage the water molecules were added to the supramolecular cluster. In addition, this study demonstrated that the change in substituent at the 5-position of the pyrazoline ring, as well as the presence of water, affected the crystalline packing of the compounds, from the first supramolecular dimers. Although water molecules aggregate to the supramolecular cluster only in the fourth hierarchy of interaction, the change in crystalline packing when compared to the solvate molecule and the unsolvated molecule suggests the existence of a balance between the two forms in solution. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-07-20 2018-09-24T19:32:48Z 2018-09-24T19:32:48Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://repositorio.ufsm.br/handle/1/14372 |
dc.identifier.dark.fl_str_mv |
ark:/26339/0013000007gw9 |
url |
http://repositorio.ufsm.br/handle/1/14372 |
identifier_str_mv |
ark:/26339/0013000007gw9 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.rights.driver.fl_str_mv |
Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Santa Maria Brasil Química UFSM Programa de Pós-Graduação em Química Centro de Ciências Naturais e Exatas |
publisher.none.fl_str_mv |
Universidade Federal de Santa Maria Brasil Química UFSM Programa de Pós-Graduação em Química Centro de Ciências Naturais e Exatas |
dc.source.none.fl_str_mv |
reponame:Manancial - Repositório Digital da UFSM instname:Universidade Federal de Santa Maria (UFSM) instacron:UFSM |
instname_str |
Universidade Federal de Santa Maria (UFSM) |
instacron_str |
UFSM |
institution |
UFSM |
reponame_str |
Manancial - Repositório Digital da UFSM |
collection |
Manancial - Repositório Digital da UFSM |
repository.name.fl_str_mv |
Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM) |
repository.mail.fl_str_mv |
atendimento.sib@ufsm.br||tedebc@gmail.com |
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1815172299021615104 |