Avaliação da importância do fotorreparo de DNA em anfíbios
Autor(a) principal: | |
---|---|
Data de Publicação: | 2019 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Manancial - Repositório Digital da UFSM |
dARK ID: | ark:/26339/001300000khq9 |
Texto Completo: | http://repositorio.ufsm.br/handle/1/16762 |
Resumo: | Amphibians have suffered a widespread population decline across the globe. About 40% of existing amphibian species are threatened with extinction. Solar ultraviolet (UV) radiation (280-400 nm) has the capacity to form cytotoxic and mutagenic lesions in the amphibian genome, which may compromise the performance and fitness of these animals. Factors such as the decrease of stratospheric ozone, climate changes, deforestation and decrease of organic matter in water bodies have increased the incidence of solar UV radiation upon amphibian breeding sites. In contrast, in order to minimize the harmful effects of UV-induced lesions on their genome, amphibians have mechanisms capable of repairing them, such as photorepair (or photoreactivation), which involves the absorption of light (350-700 nm) by means of enzymes called photolyases and the transfer of electrons to the lesions, thus removing them. However, photorepair capacity varies among species, and the inefficiency of this mechanism is a possible determinant factor for population decline of UV-sensitive species. Taking this into account, the general objective of this work was to evaluate the importance of DNA photorepair in amphibians. First, the biological responses of amphibians to UV-induced DNA damage, which include photorepair capability, have been discussed through a broad review of existing literature on this topic. The results show that only three out the 21 studies found directly evaluated the UV-induced DNA lesions in vivo. As a consequence, DNA repair mechanisms are very few studied and understood. Thus, the importance of DNA photorepair for the maintenance of the feeding performance of forest specialist tadpoles previously exposed to a low environmental dose of UVB radiation (280-315 nm) was evaluated through a controlled experimental study with a species of treefrog threatened with extinction [Boana curupi (Garcia, Faivovich and Haddad, 2007); Anura; Hylidae]. The results demonstrate that UVB radiation negatively impacted tadpole weight due to reduced food consumption, which in turn was a consequence of the genotoxic impact of UVB. An additional treatment with visible light (post-UVB) suggested a low efficiency of DNA photorepair in this species, since body weight and food consumption activity remained affected. In addition, in silico analyzes were conducted with the objective of understanding the molecular basis of amphibian photolyases. Homology analyzes were performed with sequences of amphibian photolyases. Only annotated and accurate sequences were obtained from GenBank, BLASTp and tBLASTn (NCBI). The results demonstrate interspecific variations in the occurrence of these enzymes and the possible bad annotation of some sequences. From these results, future perspectives are discussed. The present dissertation demonstrates that there is still a lack of understanding of amphibian photolyases, and that possible new avenues on this subject must be traced in order to better elucidate the role of photorepair in amphibians. Therefore, the contribution of solar UV radiation to the decline of amphibians, and the importance of DNA photorepair to avoid the UV-induced genotoxic effects on amphibian species may become more evident in the near future. |
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Avaliação da importância do fotorreparo de DNA em anfíbiosAssessment of the importance of dna photorepair in amphibiansRadiação UVLuz solarDeclínio de anfíbiosDanos de DNALesões de DNAReparo de DNAFotorreparo de DNAFotorreativaçãoFotoliasesGirinosPerformance alimentarFlorestaMata AtlânticaUV radiationSunlightAmphibian declineDNA lesionsDNA repairDNA photorepairPhotoreactivationTadpolesFeeding performanceForestAtlantic ForestCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICAAmphibians have suffered a widespread population decline across the globe. About 40% of existing amphibian species are threatened with extinction. Solar ultraviolet (UV) radiation (280-400 nm) has the capacity to form cytotoxic and mutagenic lesions in the amphibian genome, which may compromise the performance and fitness of these animals. Factors such as the decrease of stratospheric ozone, climate changes, deforestation and decrease of organic matter in water bodies have increased the incidence of solar UV radiation upon amphibian breeding sites. In contrast, in order to minimize the harmful effects of UV-induced lesions on their genome, amphibians have mechanisms capable of repairing them, such as photorepair (or photoreactivation), which involves the absorption of light (350-700 nm) by means of enzymes called photolyases and the transfer of electrons to the lesions, thus removing them. However, photorepair capacity varies among species, and the inefficiency of this mechanism is a possible determinant factor for population decline of UV-sensitive species. Taking this into account, the general objective of this work was to evaluate the importance of DNA photorepair in amphibians. First, the biological responses of amphibians to UV-induced DNA damage, which include photorepair capability, have been discussed through a broad review of existing literature on this topic. The results show that only three out the 21 studies found directly evaluated the UV-induced DNA lesions in vivo. As a consequence, DNA repair mechanisms are very few studied and understood. Thus, the importance of DNA photorepair for the maintenance of the feeding performance of forest specialist tadpoles previously exposed to a low environmental dose of UVB radiation (280-315 nm) was evaluated through a controlled experimental study with a species of treefrog threatened with extinction [Boana curupi (Garcia, Faivovich and Haddad, 2007); Anura; Hylidae]. The results demonstrate that UVB radiation negatively impacted tadpole weight due to reduced food consumption, which in turn was a consequence of the genotoxic impact of UVB. An additional treatment with visible light (post-UVB) suggested a low efficiency of DNA photorepair in this species, since body weight and food consumption activity remained affected. In addition, in silico analyzes were conducted with the objective of understanding the molecular basis of amphibian photolyases. Homology analyzes were performed with sequences of amphibian photolyases. Only annotated and accurate sequences were obtained from GenBank, BLASTp and tBLASTn (NCBI). The results demonstrate interspecific variations in the occurrence of these enzymes and the possible bad annotation of some sequences. From these results, future perspectives are discussed. The present dissertation demonstrates that there is still a lack of understanding of amphibian photolyases, and that possible new avenues on this subject must be traced in order to better elucidate the role of photorepair in amphibians. Therefore, the contribution of solar UV radiation to the decline of amphibians, and the importance of DNA photorepair to avoid the UV-induced genotoxic effects on amphibian species may become more evident in the near future.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESOs anfíbios têm sofrido um declínio populacional generalizado em todo o globo. Em torno de 40% das espécies de anfíbios existentes estão ameaçadas de extinção. A radiação ultravioleta (UV) solar (280-400 nm) possui a capacidade de formar lesões citotóxicas e mutagênicas no genoma de anfíbios, as quais podem comprometer o desempenho e aptidão destes animais. Fatores como o decréscimo do ozônio estratosférico, mudanças climáticas, desmatamento e diminuição de matéria orgânica em cor-pos de água, têm aumentado a incidência de radiação UV solar em sítios reprodutivos de anfíbios. Em contrapartida, a fim de minimizar os efeitos prejudiciais das lesões induzidas pela UV em seu genoma, anfíbios possuem mecanismos capazes de repará-las, tais como o fotorreparo (ou fotorreativação), o qual envolve a absorção de luz (350-700 nm) por meio de enzimas chamadas fotoliases e a transferên-cia de elétrons às lesões, assim removendo-as. No entanto, a capacidade de fotorreparo varia entre espécies, sendo a ineficiência deste mecanismo um possível fator determinante para o declínio popula-cional de espécies sensíveis à radiação solar. Levando isto em consideração, o objetivo geral deste trabalho consistiu em avaliar a importância do fotorreparo de DNA em anfíbios. Primeiramente, as respostas biológicas de anfíbios aos danos de DNA induzidos pela UV, as quais incluem a capacidade de fotorreparo, foram discutidas através de uma revisão ampla da literatura existente sobre este tópico. Os resultados demonstram que apenas três trabalhos dos 21 encontrados avaliaram diretamente as lesões de DNA induzidas pela UV in vivo. Como consequência, os mecanismos de reparo de DNA são pouquíssimos estudados e compreendidos. Desta forma, a importância do fotorreparo de DNA para a manutenção do desempenho alimentar de girinos especialistas florestais previamente expostos a uma baixa dose ambiental de radiação UVB (280-315 nm) foi avaliada através de um estudo experimental controlado com girinos de uma espécie de perereca ameaçada de extinção [Boana curupi (Garcia, Fai-vovich e Haddad, 2007); Anura; Hylidae]. Os resultados demonstram que a radiação UVB impactou negativamente no peso dos girinos devido a uma redução do consumo de alimento, que por sua vez foi consequência do impacto genotóxico da UVB. O tratamento adicional com luz visível (pós UVB) su-geriu uma baixa eficiência do fotorreparo de DNA nesta espécie, uma vez que o peso corporal e a ati-vidade de consumo de alimento permaneceram afetados. Adicionalmente, análises in silico foram con-duzidas com o objetivo de compreender as bases moleculares das fotoliases de anfíbios. Análises de homologia foram realizadas com sequências de fotoliases de anfíbios. Apenas sequências anotadas e acuradas foram obtidas a partir do GenBank, BLASTp e tBLASTn (NCBI). Os resultados demonstram variações interespecíficas na ocorrência destas enzimas e a possível má anotação de algumas sequên-cias. A partir destes resultados, perspectivas futuras são discutidas. A presente dissertação demonstra que há ainda uma falta de compreensão do fotorreparo em anfíbios, e que possíveis novas avenidas sobre este tema devem ser traçadas, a fim de melhor elucidar o papel do fotorreparo em anfíbios. Por-tanto, a contribuição da radiação UV solar para o declínio de anfíbios e a importância do fotorreparo de DNA para evitar os efeitos genotóxicos induzidos pela radiação UV em espécies de anfíbios pode se tornar mais evidente em um futuro próximo.Universidade Federal de Santa MariaBrasilBioquímicaUFSMPrograma de Pós-Graduação em Ciências Biológicas: Bioquímica ToxicológicaCentro de Ciências Naturais e ExatasSchuch, André Passagliahttp://lattes.cnpq.br/4932611269622766Souza, Tiago Antonio dehttp://lattes.cnpq.br/8087827185656489Araújo, Daniel Mendes Pereira Ardisson dehttp://lattes.cnpq.br/5900778605189135Londero, James Eduardo Lago2019-06-05T22:00:35Z2019-06-05T22:00:35Z2019-02-19info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/16762ark:/26339/001300000khq9porAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2022-06-03T15:41:30Zoai:repositorio.ufsm.br:1/16762Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2022-06-03T15:41:30Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false |
dc.title.none.fl_str_mv |
Avaliação da importância do fotorreparo de DNA em anfíbios Assessment of the importance of dna photorepair in amphibians |
title |
Avaliação da importância do fotorreparo de DNA em anfíbios |
spellingShingle |
Avaliação da importância do fotorreparo de DNA em anfíbios Londero, James Eduardo Lago Radiação UV Luz solar Declínio de anfíbios Danos de DNA Lesões de DNA Reparo de DNA Fotorreparo de DNA Fotorreativação Fotoliases Girinos Performance alimentar Floresta Mata Atlântica UV radiation Sunlight Amphibian decline DNA lesions DNA repair DNA photorepair Photoreactivation Tadpoles Feeding performance Forest Atlantic Forest CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA |
title_short |
Avaliação da importância do fotorreparo de DNA em anfíbios |
title_full |
Avaliação da importância do fotorreparo de DNA em anfíbios |
title_fullStr |
Avaliação da importância do fotorreparo de DNA em anfíbios |
title_full_unstemmed |
Avaliação da importância do fotorreparo de DNA em anfíbios |
title_sort |
Avaliação da importância do fotorreparo de DNA em anfíbios |
author |
Londero, James Eduardo Lago |
author_facet |
Londero, James Eduardo Lago |
author_role |
author |
dc.contributor.none.fl_str_mv |
Schuch, André Passaglia http://lattes.cnpq.br/4932611269622766 Souza, Tiago Antonio de http://lattes.cnpq.br/8087827185656489 Araújo, Daniel Mendes Pereira Ardisson de http://lattes.cnpq.br/5900778605189135 |
dc.contributor.author.fl_str_mv |
Londero, James Eduardo Lago |
dc.subject.por.fl_str_mv |
Radiação UV Luz solar Declínio de anfíbios Danos de DNA Lesões de DNA Reparo de DNA Fotorreparo de DNA Fotorreativação Fotoliases Girinos Performance alimentar Floresta Mata Atlântica UV radiation Sunlight Amphibian decline DNA lesions DNA repair DNA photorepair Photoreactivation Tadpoles Feeding performance Forest Atlantic Forest CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA |
topic |
Radiação UV Luz solar Declínio de anfíbios Danos de DNA Lesões de DNA Reparo de DNA Fotorreparo de DNA Fotorreativação Fotoliases Girinos Performance alimentar Floresta Mata Atlântica UV radiation Sunlight Amphibian decline DNA lesions DNA repair DNA photorepair Photoreactivation Tadpoles Feeding performance Forest Atlantic Forest CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA |
description |
Amphibians have suffered a widespread population decline across the globe. About 40% of existing amphibian species are threatened with extinction. Solar ultraviolet (UV) radiation (280-400 nm) has the capacity to form cytotoxic and mutagenic lesions in the amphibian genome, which may compromise the performance and fitness of these animals. Factors such as the decrease of stratospheric ozone, climate changes, deforestation and decrease of organic matter in water bodies have increased the incidence of solar UV radiation upon amphibian breeding sites. In contrast, in order to minimize the harmful effects of UV-induced lesions on their genome, amphibians have mechanisms capable of repairing them, such as photorepair (or photoreactivation), which involves the absorption of light (350-700 nm) by means of enzymes called photolyases and the transfer of electrons to the lesions, thus removing them. However, photorepair capacity varies among species, and the inefficiency of this mechanism is a possible determinant factor for population decline of UV-sensitive species. Taking this into account, the general objective of this work was to evaluate the importance of DNA photorepair in amphibians. First, the biological responses of amphibians to UV-induced DNA damage, which include photorepair capability, have been discussed through a broad review of existing literature on this topic. The results show that only three out the 21 studies found directly evaluated the UV-induced DNA lesions in vivo. As a consequence, DNA repair mechanisms are very few studied and understood. Thus, the importance of DNA photorepair for the maintenance of the feeding performance of forest specialist tadpoles previously exposed to a low environmental dose of UVB radiation (280-315 nm) was evaluated through a controlled experimental study with a species of treefrog threatened with extinction [Boana curupi (Garcia, Faivovich and Haddad, 2007); Anura; Hylidae]. The results demonstrate that UVB radiation negatively impacted tadpole weight due to reduced food consumption, which in turn was a consequence of the genotoxic impact of UVB. An additional treatment with visible light (post-UVB) suggested a low efficiency of DNA photorepair in this species, since body weight and food consumption activity remained affected. In addition, in silico analyzes were conducted with the objective of understanding the molecular basis of amphibian photolyases. Homology analyzes were performed with sequences of amphibian photolyases. Only annotated and accurate sequences were obtained from GenBank, BLASTp and tBLASTn (NCBI). The results demonstrate interspecific variations in the occurrence of these enzymes and the possible bad annotation of some sequences. From these results, future perspectives are discussed. The present dissertation demonstrates that there is still a lack of understanding of amphibian photolyases, and that possible new avenues on this subject must be traced in order to better elucidate the role of photorepair in amphibians. Therefore, the contribution of solar UV radiation to the decline of amphibians, and the importance of DNA photorepair to avoid the UV-induced genotoxic effects on amphibian species may become more evident in the near future. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-06-05T22:00:35Z 2019-06-05T22:00:35Z 2019-02-19 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://repositorio.ufsm.br/handle/1/16762 |
dc.identifier.dark.fl_str_mv |
ark:/26339/001300000khq9 |
url |
http://repositorio.ufsm.br/handle/1/16762 |
identifier_str_mv |
ark:/26339/001300000khq9 |
dc.language.iso.fl_str_mv |
por |
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por |
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Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
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Attribution-NonCommercial-NoDerivatives 4.0 International http://creativecommons.org/licenses/by-nc-nd/4.0/ |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Santa Maria Brasil Bioquímica UFSM Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica Centro de Ciências Naturais e Exatas |
publisher.none.fl_str_mv |
Universidade Federal de Santa Maria Brasil Bioquímica UFSM Programa de Pós-Graduação em Ciências Biológicas: Bioquímica Toxicológica Centro de Ciências Naturais e Exatas |
dc.source.none.fl_str_mv |
reponame:Manancial - Repositório Digital da UFSM instname:Universidade Federal de Santa Maria (UFSM) instacron:UFSM |
instname_str |
Universidade Federal de Santa Maria (UFSM) |
instacron_str |
UFSM |
institution |
UFSM |
reponame_str |
Manancial - Repositório Digital da UFSM |
collection |
Manancial - Repositório Digital da UFSM |
repository.name.fl_str_mv |
Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM) |
repository.mail.fl_str_mv |
atendimento.sib@ufsm.br||tedebc@gmail.com |
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1815172356612554752 |