Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio

Detalhes bibliográficos
Autor(a) principal: Rosa, Jéssica Maria Luis
Data de Publicação: 2024
Tipo de documento: Tese
Idioma: por
Título da fonte: Manancial - Repositório Digital da UFSM
Texto Completo: http://repositorio.ufsm.br/handle/1/32372
Resumo: This thesis presents the studies carried out for (i) self-association and polymorphism of N-(heterocycle)-2-phenoxyacetamide compounds through the identification of intra- and intermolecular interactions; (ii) proposal of a supramolecular energy similarity index (ESIM) to compare relative differences in supramolecular stabilization energy in polymorphic systems of organic compounds and (iii) quantification of intermolecular interactions in ammonium carboxylate salts, evaluating supramolecular energetic stability. The results were organized into three chapters, each addressing one of the themes mentioned. The self-association of a series of N- (heterocycle)amides was evaluated to determine the molecular and supramolecular energetic differences between their polymorph pairs. Based on proposals for crystallization mechanisms, the formation of dimers with the same patterns of intermolecular hydrogen interactions NH··∙N between the amide group and the heterocycle was observed, and changes in nucleation occurred from the second stage of crystallization. The comparison between the molecular and supramolecular stabilization energies for polymorph pairs suggests that intermolecular interactions can compensate for an energetically less stable molecular conformation. The supramolecular stabilization energy of several polymorphic pairs of organic compounds was analyzed and compared. It was observed that evaluating the similarity of the supramolecular stabilization energy in terms of absolute values does not appear to be an adequate approach. From this, a similarity index (ESIM) was developed, which consists of the energetic values normalization of supramolecular clusters of polymorphs, which can be applied to any pair of polymorphic crystalline structures. In the study involving crystalline structures of ammonium carboxylates, the ammonium cation (NH4 + ) was fixed to evaluate the impact of variations in the alkyl chain of selected mono- and dicarboxylate compounds, such as length or degree of unsaturation. Dimers with almost zero intermolecular interaction energies were detected in crystalline structures of ammonium carboxylates, resulting from repulsive interactions with a magnitude similar to that of attractive interactions. Destabilizing interactions occur when portions with the same type of charge come closer together. However, most crystal lattices have energetic characteristics close to those of uncharged organic compounds.
id UFSM_cc15c736dd00e7a81d3531b1a59790d1
oai_identifier_str oai:repositorio.ufsm.br:1/32372
network_acronym_str UFSM
network_name_str Manancial - Repositório Digital da UFSM
repository_id_str
spelling Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônioEnergetic similarity of polymorphs: N-azole-2-phenoxyacetamides and other organic compounds. Energy addition of intermolecular interactions: ammonium carboxylateEngenharia de cristaisPolimorfosN-azol-2-fenoxiacetamidasSimilaridade energética supramolecularCarboxilatos de amônioCrystal engineeringPolymorphsN-azol-2-phenoxyacetamidesSupramolecular energetic similarityAmmonium carboxylatesCNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICAThis thesis presents the studies carried out for (i) self-association and polymorphism of N-(heterocycle)-2-phenoxyacetamide compounds through the identification of intra- and intermolecular interactions; (ii) proposal of a supramolecular energy similarity index (ESIM) to compare relative differences in supramolecular stabilization energy in polymorphic systems of organic compounds and (iii) quantification of intermolecular interactions in ammonium carboxylate salts, evaluating supramolecular energetic stability. The results were organized into three chapters, each addressing one of the themes mentioned. The self-association of a series of N- (heterocycle)amides was evaluated to determine the molecular and supramolecular energetic differences between their polymorph pairs. Based on proposals for crystallization mechanisms, the formation of dimers with the same patterns of intermolecular hydrogen interactions NH··∙N between the amide group and the heterocycle was observed, and changes in nucleation occurred from the second stage of crystallization. The comparison between the molecular and supramolecular stabilization energies for polymorph pairs suggests that intermolecular interactions can compensate for an energetically less stable molecular conformation. The supramolecular stabilization energy of several polymorphic pairs of organic compounds was analyzed and compared. It was observed that evaluating the similarity of the supramolecular stabilization energy in terms of absolute values does not appear to be an adequate approach. From this, a similarity index (ESIM) was developed, which consists of the energetic values normalization of supramolecular clusters of polymorphs, which can be applied to any pair of polymorphic crystalline structures. In the study involving crystalline structures of ammonium carboxylates, the ammonium cation (NH4 + ) was fixed to evaluate the impact of variations in the alkyl chain of selected mono- and dicarboxylate compounds, such as length or degree of unsaturation. Dimers with almost zero intermolecular interaction energies were detected in crystalline structures of ammonium carboxylates, resulting from repulsive interactions with a magnitude similar to that of attractive interactions. Destabilizing interactions occur when portions with the same type of charge come closer together. However, most crystal lattices have energetic characteristics close to those of uncharged organic compounds.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESConselho Nacional de Pesquisa e Desenvolvimento Científico e Tecnológico - CNPqFundação de Amparo à Pesquisa do Estado do Rio Grande do Sul - FAPERGSEsta Tese apresenta os estudos realizados para (i) autoassociação e polimorfismo de compostos N-azol-2-fenoxiacetamida através da identificação de interações intra e intermoleculares; (ii) proposta de um índice de similaridade de energia supramolecular (ESIM) para comparar diferenças relativas na energia de estabilização supramolecular em sistemas polimórficos de compostos orgânicos e (iii) quantificação de interações intermoleculares em sais de carboxilato de amônio, avaliando a estabilidade energética supramolecular. Os resultados foram organizados em três capítulos, cada um abordando um dos temas mencionados. A autoassociação de uma série de N-azol-2-amidas foi avaliada para determinar as diferenças energéticas moleculares e supramoleculares entre seus pares polimorfos. Com base nas propostas de mecanismos de cristalização, foi observada a formação de dímeros com os mesmos padrões de interações intermoleculares de hidrogênio NH··∙N entre o grupo amida e o heterociclo, e alterações na nucleação ocorreram a partir da segunda etapa de cristalização. A comparação entre as energias de estabilização molecular e supramolecular para pares polimorfos sugere que as interações intermoleculares podem compensar uma conformação molecular energeticamente menos estável. A energia de estabilização supramolecular de vários pares polimórficos de compostos orgânicos foi analisada e comparada. Observou-se que avaliar a similaridade da energia de estabilização supramolecular em termos de valores absolutos não parece ser uma abordagem adequada. A partir disso, foi desenvolvido um índice de similaridade (ESIM), que consiste na normalização dos valores energéticos de clusters supramoleculares de polimorfos, que pode ser aplicado a qualquer par de estruturas cristalinas polimórficas. No estudo envolvendo estruturas cristalinas de carboxilatos de amônio, o cátion amônio (NH4 + ) foi fixado para avaliar o impacto de variações na cadeia alquílica de compostos mono e dicarboxilatos selecionados, como comprimento ou grau de insaturação. Dímeros com energias de interação intermoleculares quase nulas foram detectados em estruturas cristalinas de carboxilatos de amônio, resultantes de interações repulsivas com magnitude semelhante à de interações atrativas. Interações desestabilizadoras ocorrem quando porções com o mesmo tipo de carga se aproximam. No entanto, a maioria das redes cristalinas possui características energéticas próximas às dos compostos orgânicos sem carga.Universidade Federal de Santa MariaBrasilQuímicaUFSMPrograma de Pós-Graduação em QuímicaCentro de Ciências Naturais e ExatasMartins, Marcos Antonio Pintohttp://lattes.cnpq.br/6457412713967642Bender, Caroline RaquelBandeira, Pamela TaislineFiss, Gabriela FehnRosa, Fernanda AndreiaRosa, Jéssica Maria Luis2024-07-18T13:40:45Z2024-07-18T13:40:45Z2024-03-21info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfhttp://repositorio.ufsm.br/handle/1/32372porAttribution-NonCommercial-NoDerivatives 4.0 Internationalhttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSM2024-07-18T13:40:45Zoai:repositorio.ufsm.br:1/32372Biblioteca Digital de Teses e Dissertaçõeshttps://repositorio.ufsm.br/ONGhttps://repositorio.ufsm.br/oai/requestatendimento.sib@ufsm.br||tedebc@gmail.comopendoar:2024-07-18T13:40:45Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.none.fl_str_mv Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
Energetic similarity of polymorphs: N-azole-2-phenoxyacetamides and other organic compounds. Energy addition of intermolecular interactions: ammonium carboxylate
title Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
spellingShingle Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
Rosa, Jéssica Maria Luis
Engenharia de cristais
Polimorfos
N-azol-2-fenoxiacetamidas
Similaridade energética supramolecular
Carboxilatos de amônio
Crystal engineering
Polymorphs
N-azol-2-phenoxyacetamides
Supramolecular energetic similarity
Ammonium carboxylates
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA
title_short Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
title_full Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
title_fullStr Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
title_full_unstemmed Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
title_sort Similaridade energética de polimorfos: N-azol-2-fenoxiacetamidas e outros compostos orgânicos. Aditividade energética de interações intermoleculares: carboxilatos de amônio
author Rosa, Jéssica Maria Luis
author_facet Rosa, Jéssica Maria Luis
author_role author
dc.contributor.none.fl_str_mv Martins, Marcos Antonio Pinto
http://lattes.cnpq.br/6457412713967642
Bender, Caroline Raquel
Bandeira, Pamela Taisline
Fiss, Gabriela Fehn
Rosa, Fernanda Andreia
dc.contributor.author.fl_str_mv Rosa, Jéssica Maria Luis
dc.subject.por.fl_str_mv Engenharia de cristais
Polimorfos
N-azol-2-fenoxiacetamidas
Similaridade energética supramolecular
Carboxilatos de amônio
Crystal engineering
Polymorphs
N-azol-2-phenoxyacetamides
Supramolecular energetic similarity
Ammonium carboxylates
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA
topic Engenharia de cristais
Polimorfos
N-azol-2-fenoxiacetamidas
Similaridade energética supramolecular
Carboxilatos de amônio
Crystal engineering
Polymorphs
N-azol-2-phenoxyacetamides
Supramolecular energetic similarity
Ammonium carboxylates
CNPQ::CIENCIAS EXATAS E DA TERRA::QUIMICA
description This thesis presents the studies carried out for (i) self-association and polymorphism of N-(heterocycle)-2-phenoxyacetamide compounds through the identification of intra- and intermolecular interactions; (ii) proposal of a supramolecular energy similarity index (ESIM) to compare relative differences in supramolecular stabilization energy in polymorphic systems of organic compounds and (iii) quantification of intermolecular interactions in ammonium carboxylate salts, evaluating supramolecular energetic stability. The results were organized into three chapters, each addressing one of the themes mentioned. The self-association of a series of N- (heterocycle)amides was evaluated to determine the molecular and supramolecular energetic differences between their polymorph pairs. Based on proposals for crystallization mechanisms, the formation of dimers with the same patterns of intermolecular hydrogen interactions NH··∙N between the amide group and the heterocycle was observed, and changes in nucleation occurred from the second stage of crystallization. The comparison between the molecular and supramolecular stabilization energies for polymorph pairs suggests that intermolecular interactions can compensate for an energetically less stable molecular conformation. The supramolecular stabilization energy of several polymorphic pairs of organic compounds was analyzed and compared. It was observed that evaluating the similarity of the supramolecular stabilization energy in terms of absolute values does not appear to be an adequate approach. From this, a similarity index (ESIM) was developed, which consists of the energetic values normalization of supramolecular clusters of polymorphs, which can be applied to any pair of polymorphic crystalline structures. In the study involving crystalline structures of ammonium carboxylates, the ammonium cation (NH4 + ) was fixed to evaluate the impact of variations in the alkyl chain of selected mono- and dicarboxylate compounds, such as length or degree of unsaturation. Dimers with almost zero intermolecular interaction energies were detected in crystalline structures of ammonium carboxylates, resulting from repulsive interactions with a magnitude similar to that of attractive interactions. Destabilizing interactions occur when portions with the same type of charge come closer together. However, most crystal lattices have energetic characteristics close to those of uncharged organic compounds.
publishDate 2024
dc.date.none.fl_str_mv 2024-07-18T13:40:45Z
2024-07-18T13:40:45Z
2024-03-21
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/32372
url http://repositorio.ufsm.br/handle/1/32372
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivatives 4.0 International
http://creativecommons.org/licenses/by-nc-nd/4.0/
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Química
UFSM
Programa de Pós-Graduação em Química
Centro de Ciências Naturais e Exatas
publisher.none.fl_str_mv Universidade Federal de Santa Maria
Brasil
Química
UFSM
Programa de Pós-Graduação em Química
Centro de Ciências Naturais e Exatas
dc.source.none.fl_str_mv reponame:Manancial - Repositório Digital da UFSM
instname:Universidade Federal de Santa Maria (UFSM)
instacron:UFSM
instname_str Universidade Federal de Santa Maria (UFSM)
instacron_str UFSM
institution UFSM
reponame_str Manancial - Repositório Digital da UFSM
collection Manancial - Repositório Digital da UFSM
repository.name.fl_str_mv Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)
repository.mail.fl_str_mv atendimento.sib@ufsm.br||tedebc@gmail.com
_version_ 1805922030303838208