Divergence of HIV-1 quasispecies in an epidemiologic cluster

Detalhes bibliográficos
Autor(a) principal: Diaz, Ricardo Sobhie [UNIFESP]
Data de Publicação: 1997
Outros Autores: Zhang, L. Q., Busch, Michael P. [UNIFESP], Mosley, J. W., Mayer, A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://repositorio.unifesp.br/handle/11600/25705
http://dx.doi.org/10.1097/00002030-199704000-00003
Resumo: Background: During treatment with blood components prepared from an HIV-infected donation, two recipients became infected in 1985. One recipient infected her sexual partner.Objective: To evaluate the evolution of the originally-shared HIV-1 quasispecies in different human hosts over lime, sequence data were obtained from serum from the actual donation sample of blood, and from plasma samples collected from the four members of the epidemiologic cluster over a period extending from 1986 to 1993.Methods: the V3 hypervariable region of env and the gag p17 gene were analysed. CD4 and CD8 counts, as well as HIV RNA burden data, were collected.Results: One patient died from AIDS during the study. This patient showed a greater degree of diversity in the V3 region, with a higher positive charge over time, than the other individuals. Phylogenetic analysis revealed that the V3 sequences from each of the four individuals occupied separate branches of a phylogenetic reconstruction (tree). Two distinct subgroups evolved in the donor, one with GPGR and the other with GSGR/GSGK at the tip of the V3 loop. This latter group was not detected in the other individuals. the sequences in the sexual partner were no more related to those in the infecting transfusion recipient than to sequences from the other members of the cluster, consistent with sexual transmission having occurred at a time shortly after the recipient was infected.Conclusion: the shared HIV-1 quasispecies in this epidemiologic cluster diverged in an individual-specific manner.
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spelling Diaz, Ricardo Sobhie [UNIFESP]Zhang, L. Q.Busch, Michael P. [UNIFESP]Mosley, J. W.Mayer, A.IRWIN MEM BLOOD CTRUniversidade Federal de São Paulo (UNIFESP)AARON DIAMOND AIDS RES CTRUNIV CALIF SAN FRANCISCOUNIV SO CALIF2016-01-24T12:30:19Z2016-01-24T12:30:19Z1997-03-15Aids. London: Rapid Science Publishers, v. 11, n. 4, p. 415-422, 1997.0269-9370http://repositorio.unifesp.br/handle/11600/25705http://dx.doi.org/10.1097/00002030-199704000-0000310.1097/00002030-199704000-00003WOS:A1997WN61800003Background: During treatment with blood components prepared from an HIV-infected donation, two recipients became infected in 1985. One recipient infected her sexual partner.Objective: To evaluate the evolution of the originally-shared HIV-1 quasispecies in different human hosts over lime, sequence data were obtained from serum from the actual donation sample of blood, and from plasma samples collected from the four members of the epidemiologic cluster over a period extending from 1986 to 1993.Methods: the V3 hypervariable region of env and the gag p17 gene were analysed. CD4 and CD8 counts, as well as HIV RNA burden data, were collected.Results: One patient died from AIDS during the study. This patient showed a greater degree of diversity in the V3 region, with a higher positive charge over time, than the other individuals. Phylogenetic analysis revealed that the V3 sequences from each of the four individuals occupied separate branches of a phylogenetic reconstruction (tree). Two distinct subgroups evolved in the donor, one with GPGR and the other with GSGR/GSGK at the tip of the V3 loop. This latter group was not detected in the other individuals. the sequences in the sexual partner were no more related to those in the infecting transfusion recipient than to sequences from the other members of the cluster, consistent with sexual transmission having occurred at a time shortly after the recipient was infected.Conclusion: the shared HIV-1 quasispecies in this epidemiologic cluster diverged in an individual-specific manner.IRWIN MEM BLOOD CTR,RES & SCI SERV,SAN FRANCISCO,CA 94118Universidade Federal de São Paulo,ESCOLA PAULISTA MED,São Paulo,BRAZILAARON DIAMOND AIDS RES CTR,NEW YORK,NYUNIV CALIF SAN FRANCISCO,DEPT LAB MED,SAN FRANCISCO,CA 94143UNIV SO CALIF,SCH MED,LOS ANGELES,CAUniversidade Federal de São Paulo,ESCOLA PAULISTA MED,São Paulo,BRAZILWeb of Science415-422engRapid Science PublishersAidsdisease progressionheterogeneitymolecular biologyDivergence of HIV-1 quasispecies in an epidemiologic clusterinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP11600/257052023-02-15 11:39:38.62metadata only accessoai:repositorio.unifesp.br:11600/25705Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestopendoar:34652023-02-15T14:39:38Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.en.fl_str_mv Divergence of HIV-1 quasispecies in an epidemiologic cluster
title Divergence of HIV-1 quasispecies in an epidemiologic cluster
spellingShingle Divergence of HIV-1 quasispecies in an epidemiologic cluster
Diaz, Ricardo Sobhie [UNIFESP]
disease progression
heterogeneity
molecular biology
title_short Divergence of HIV-1 quasispecies in an epidemiologic cluster
title_full Divergence of HIV-1 quasispecies in an epidemiologic cluster
title_fullStr Divergence of HIV-1 quasispecies in an epidemiologic cluster
title_full_unstemmed Divergence of HIV-1 quasispecies in an epidemiologic cluster
title_sort Divergence of HIV-1 quasispecies in an epidemiologic cluster
author Diaz, Ricardo Sobhie [UNIFESP]
author_facet Diaz, Ricardo Sobhie [UNIFESP]
Zhang, L. Q.
Busch, Michael P. [UNIFESP]
Mosley, J. W.
Mayer, A.
author_role author
author2 Zhang, L. Q.
Busch, Michael P. [UNIFESP]
Mosley, J. W.
Mayer, A.
author2_role author
author
author
author
dc.contributor.institution.none.fl_str_mv IRWIN MEM BLOOD CTR
Universidade Federal de São Paulo (UNIFESP)
AARON DIAMOND AIDS RES CTR
UNIV CALIF SAN FRANCISCO
UNIV SO CALIF
dc.contributor.author.fl_str_mv Diaz, Ricardo Sobhie [UNIFESP]
Zhang, L. Q.
Busch, Michael P. [UNIFESP]
Mosley, J. W.
Mayer, A.
dc.subject.eng.fl_str_mv disease progression
heterogeneity
molecular biology
topic disease progression
heterogeneity
molecular biology
description Background: During treatment with blood components prepared from an HIV-infected donation, two recipients became infected in 1985. One recipient infected her sexual partner.Objective: To evaluate the evolution of the originally-shared HIV-1 quasispecies in different human hosts over lime, sequence data were obtained from serum from the actual donation sample of blood, and from plasma samples collected from the four members of the epidemiologic cluster over a period extending from 1986 to 1993.Methods: the V3 hypervariable region of env and the gag p17 gene were analysed. CD4 and CD8 counts, as well as HIV RNA burden data, were collected.Results: One patient died from AIDS during the study. This patient showed a greater degree of diversity in the V3 region, with a higher positive charge over time, than the other individuals. Phylogenetic analysis revealed that the V3 sequences from each of the four individuals occupied separate branches of a phylogenetic reconstruction (tree). Two distinct subgroups evolved in the donor, one with GPGR and the other with GSGR/GSGK at the tip of the V3 loop. This latter group was not detected in the other individuals. the sequences in the sexual partner were no more related to those in the infecting transfusion recipient than to sequences from the other members of the cluster, consistent with sexual transmission having occurred at a time shortly after the recipient was infected.Conclusion: the shared HIV-1 quasispecies in this epidemiologic cluster diverged in an individual-specific manner.
publishDate 1997
dc.date.issued.fl_str_mv 1997-03-15
dc.date.accessioned.fl_str_mv 2016-01-24T12:30:19Z
dc.date.available.fl_str_mv 2016-01-24T12:30:19Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv Aids. London: Rapid Science Publishers, v. 11, n. 4, p. 415-422, 1997.
dc.identifier.uri.fl_str_mv http://repositorio.unifesp.br/handle/11600/25705
http://dx.doi.org/10.1097/00002030-199704000-00003
dc.identifier.issn.none.fl_str_mv 0269-9370
dc.identifier.doi.none.fl_str_mv 10.1097/00002030-199704000-00003
dc.identifier.wos.none.fl_str_mv WOS:A1997WN61800003
identifier_str_mv Aids. London: Rapid Science Publishers, v. 11, n. 4, p. 415-422, 1997.
0269-9370
10.1097/00002030-199704000-00003
WOS:A1997WN61800003
url http://repositorio.unifesp.br/handle/11600/25705
http://dx.doi.org/10.1097/00002030-199704000-00003
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.none.fl_str_mv Aids
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 415-422
dc.publisher.none.fl_str_mv Rapid Science Publishers
publisher.none.fl_str_mv Rapid Science Publishers
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv
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