Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy

Detalhes bibliográficos
Autor(a) principal: Camargo, M. [UNIFESP]
Data de Publicação: 2013
Outros Autores: Intasqui Lopes, P. [UNIFESP], Del Giudice, P. T. [UNIFESP], Carvalho, V. M., Cardozo, K. H. M., Andreoni, C. [UNIFESP], Fraietta, Renato [UNIFESP], Bertolla, Ricardo Pimenta [UNIFESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
dARK ID: ark:/48912/00130000174rt
Texto Completo: http://dx.doi.org/10.1093/humrep/des357
http://repositorio.unifesp.br/handle/11600/35663
Resumo: STUDY QUESTION: Does the seminal plasma proteomic profile and functional enrichment of gene ontology terms change after microsurgical varicocelectomy? Are there any potential targets for diagnosis or therapeutic intervention in varicocele?SUMMARY ANSWER: A shift in state from a responsive-to-stress condition before varicocele correction to a responsive-to-environment condition after varicocelectomy was observed in enriched proteomic pathways.WHAT IS KNOWN ALREADY: Varicocele may lead to many adverse effects, including failure of testicular growth and development, and is associated with decreased semen quality and increased semen oxidative stress. Varicocelectomy is the treatment of choice, and is associated with improved semen quality, but little is known regarding the underlying molecular mechanisms and post-genomic pathways following intervention.STUDY DESIGN, SIZE, DURATION: A prospective study was carried out including 18 adult men with varicocele. These patients provided one semen sample before they were submitted for bilateral varicocele repair through microsurgical varicocelectomy, and one other semen sample 90 days after the surgery.PARTICIPANTS/MATERIALS, SETTING, METHODS: An aliquot of each semen sample was used for unbiased proteomics analysis by a label-free quantitative approach (2D nanoUPLC-ESI-MSE). Samples were pooled according to group (normalized to protein content) and run in quadruplicate. These quadruplicate runs provided degrees of freedom in order to compare groups using a non-parametric Mann-Whitney test for quantified proteins.MAIN RESULTS and the ROLE of CHANCE: A total of 316 proteins were quantified or identified, of which 91 were exclusively identified or quantified in one of the groups (53 in the pre- and 38 in the post-varicocelectomy group), and 68 were quantified in both groups and submitted to statistical analysis, of which 5 were overrepresented in the pre-varicocelectomy group (P < 0.05). in enriched functional analysis, binding and response to stimulus functions were enriched in a common cluster (present in both groups), nitric oxide metabolism and tetratricopeptide repeat domain-binding functions were enriched in the pre-varicocelectomy group, and response to reactive oxygen species, gluconeogenesis, nicotinamide adenine dinucleotide-binding and protein stabilization were enriched in the post-varicocelectomy.LIMITATIONS, REASONS for CAUTION: Because a shotgun proteomics analysis was chosen in order to generate a list of putative biomarkers, a targeted follow-up study should be performed to confirm these biomarkers.WIDER IMPLICATIONS of the FINDINGS: the proteins found in both groups possess functions usually found in human semen. the enriched function analysis demonstrated a shift back to homeostasis after varicocelectomy, suggesting that varicocele correction promotes return of semen to a physiological state.
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spelling Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomymale infertilityvaricocelevaricocelectomyseminal plasmaproteomicsSTUDY QUESTION: Does the seminal plasma proteomic profile and functional enrichment of gene ontology terms change after microsurgical varicocelectomy? Are there any potential targets for diagnosis or therapeutic intervention in varicocele?SUMMARY ANSWER: A shift in state from a responsive-to-stress condition before varicocele correction to a responsive-to-environment condition after varicocelectomy was observed in enriched proteomic pathways.WHAT IS KNOWN ALREADY: Varicocele may lead to many adverse effects, including failure of testicular growth and development, and is associated with decreased semen quality and increased semen oxidative stress. Varicocelectomy is the treatment of choice, and is associated with improved semen quality, but little is known regarding the underlying molecular mechanisms and post-genomic pathways following intervention.STUDY DESIGN, SIZE, DURATION: A prospective study was carried out including 18 adult men with varicocele. These patients provided one semen sample before they were submitted for bilateral varicocele repair through microsurgical varicocelectomy, and one other semen sample 90 days after the surgery.PARTICIPANTS/MATERIALS, SETTING, METHODS: An aliquot of each semen sample was used for unbiased proteomics analysis by a label-free quantitative approach (2D nanoUPLC-ESI-MSE). Samples were pooled according to group (normalized to protein content) and run in quadruplicate. These quadruplicate runs provided degrees of freedom in order to compare groups using a non-parametric Mann-Whitney test for quantified proteins.MAIN RESULTS and the ROLE of CHANCE: A total of 316 proteins were quantified or identified, of which 91 were exclusively identified or quantified in one of the groups (53 in the pre- and 38 in the post-varicocelectomy group), and 68 were quantified in both groups and submitted to statistical analysis, of which 5 were overrepresented in the pre-varicocelectomy group (P < 0.05). in enriched functional analysis, binding and response to stimulus functions were enriched in a common cluster (present in both groups), nitric oxide metabolism and tetratricopeptide repeat domain-binding functions were enriched in the pre-varicocelectomy group, and response to reactive oxygen species, gluconeogenesis, nicotinamide adenine dinucleotide-binding and protein stabilization were enriched in the post-varicocelectomy.LIMITATIONS, REASONS for CAUTION: Because a shotgun proteomics analysis was chosen in order to generate a list of putative biomarkers, a targeted follow-up study should be performed to confirm these biomarkers.WIDER IMPLICATIONS of the FINDINGS: the proteins found in both groups possess functions usually found in human semen. the enriched function analysis demonstrated a shift back to homeostasis after varicocelectomy, suggesting that varicocele correction promotes return of semen to a physiological state.Universidade Federal de São Paulo, Div Urol, Dept Surg, Human Reprod Sect,São Paulo Hosp, BR-04039060 São Paulo, BrazilFleury Grp, São Paulo, BrazilUniversidade Federal de São Paulo, Div Urol, Dept Surg, Human Reprod Sect,São Paulo Hosp, BR-04039060 São Paulo, BrazilWeb of ScienceConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Oxford Univ PressUniversidade Federal de São Paulo (UNIFESP)Fleury GrpCamargo, M. [UNIFESP]Intasqui Lopes, P. [UNIFESP]Del Giudice, P. T. [UNIFESP]Carvalho, V. M.Cardozo, K. H. M.Andreoni, C. [UNIFESP]Fraietta, Renato [UNIFESP]Bertolla, Ricardo Pimenta [UNIFESP]2016-01-24T14:30:50Z2016-01-24T14:30:50Z2013-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion33-46http://dx.doi.org/10.1093/humrep/des357Human Reproduction. Oxford: Oxford Univ Press, v. 28, n. 1, p. 33-46, 2013.10.1093/humrep/des3570268-1161http://repositorio.unifesp.br/handle/11600/35663WOS:000313834400006ark:/48912/00130000174rtengHuman Reproductioninfo:eu-repo/semantics/openAccesshttp://www.oxfordjournals.org/access_purchase/self-archiving_policyb.htmlreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-10-07T15:52:28Zoai:repositorio.unifesp.br/:11600/35663Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-12-11T21:01:06.365059Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
title Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
spellingShingle Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
Camargo, M. [UNIFESP]
male infertility
varicocele
varicocelectomy
seminal plasma
proteomics
title_short Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
title_full Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
title_fullStr Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
title_full_unstemmed Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
title_sort Unbiased label-free quantitative proteomic profiling and enriched proteomic pathways in seminal plasma of adult men before and after varicocelectomy
author Camargo, M. [UNIFESP]
author_facet Camargo, M. [UNIFESP]
Intasqui Lopes, P. [UNIFESP]
Del Giudice, P. T. [UNIFESP]
Carvalho, V. M.
Cardozo, K. H. M.
Andreoni, C. [UNIFESP]
Fraietta, Renato [UNIFESP]
Bertolla, Ricardo Pimenta [UNIFESP]
author_role author
author2 Intasqui Lopes, P. [UNIFESP]
Del Giudice, P. T. [UNIFESP]
Carvalho, V. M.
Cardozo, K. H. M.
Andreoni, C. [UNIFESP]
Fraietta, Renato [UNIFESP]
Bertolla, Ricardo Pimenta [UNIFESP]
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Paulo (UNIFESP)
Fleury Grp
dc.contributor.author.fl_str_mv Camargo, M. [UNIFESP]
Intasqui Lopes, P. [UNIFESP]
Del Giudice, P. T. [UNIFESP]
Carvalho, V. M.
Cardozo, K. H. M.
Andreoni, C. [UNIFESP]
Fraietta, Renato [UNIFESP]
Bertolla, Ricardo Pimenta [UNIFESP]
dc.subject.por.fl_str_mv male infertility
varicocele
varicocelectomy
seminal plasma
proteomics
topic male infertility
varicocele
varicocelectomy
seminal plasma
proteomics
description STUDY QUESTION: Does the seminal plasma proteomic profile and functional enrichment of gene ontology terms change after microsurgical varicocelectomy? Are there any potential targets for diagnosis or therapeutic intervention in varicocele?SUMMARY ANSWER: A shift in state from a responsive-to-stress condition before varicocele correction to a responsive-to-environment condition after varicocelectomy was observed in enriched proteomic pathways.WHAT IS KNOWN ALREADY: Varicocele may lead to many adverse effects, including failure of testicular growth and development, and is associated with decreased semen quality and increased semen oxidative stress. Varicocelectomy is the treatment of choice, and is associated with improved semen quality, but little is known regarding the underlying molecular mechanisms and post-genomic pathways following intervention.STUDY DESIGN, SIZE, DURATION: A prospective study was carried out including 18 adult men with varicocele. These patients provided one semen sample before they were submitted for bilateral varicocele repair through microsurgical varicocelectomy, and one other semen sample 90 days after the surgery.PARTICIPANTS/MATERIALS, SETTING, METHODS: An aliquot of each semen sample was used for unbiased proteomics analysis by a label-free quantitative approach (2D nanoUPLC-ESI-MSE). Samples were pooled according to group (normalized to protein content) and run in quadruplicate. These quadruplicate runs provided degrees of freedom in order to compare groups using a non-parametric Mann-Whitney test for quantified proteins.MAIN RESULTS and the ROLE of CHANCE: A total of 316 proteins were quantified or identified, of which 91 were exclusively identified or quantified in one of the groups (53 in the pre- and 38 in the post-varicocelectomy group), and 68 were quantified in both groups and submitted to statistical analysis, of which 5 were overrepresented in the pre-varicocelectomy group (P < 0.05). in enriched functional analysis, binding and response to stimulus functions were enriched in a common cluster (present in both groups), nitric oxide metabolism and tetratricopeptide repeat domain-binding functions were enriched in the pre-varicocelectomy group, and response to reactive oxygen species, gluconeogenesis, nicotinamide adenine dinucleotide-binding and protein stabilization were enriched in the post-varicocelectomy.LIMITATIONS, REASONS for CAUTION: Because a shotgun proteomics analysis was chosen in order to generate a list of putative biomarkers, a targeted follow-up study should be performed to confirm these biomarkers.WIDER IMPLICATIONS of the FINDINGS: the proteins found in both groups possess functions usually found in human semen. the enriched function analysis demonstrated a shift back to homeostasis after varicocelectomy, suggesting that varicocele correction promotes return of semen to a physiological state.
publishDate 2013
dc.date.none.fl_str_mv 2013-01-01
2016-01-24T14:30:50Z
2016-01-24T14:30:50Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1093/humrep/des357
Human Reproduction. Oxford: Oxford Univ Press, v. 28, n. 1, p. 33-46, 2013.
10.1093/humrep/des357
0268-1161
http://repositorio.unifesp.br/handle/11600/35663
WOS:000313834400006
dc.identifier.dark.fl_str_mv ark:/48912/00130000174rt
url http://dx.doi.org/10.1093/humrep/des357
http://repositorio.unifesp.br/handle/11600/35663
identifier_str_mv Human Reproduction. Oxford: Oxford Univ Press, v. 28, n. 1, p. 33-46, 2013.
10.1093/humrep/des357
0268-1161
WOS:000313834400006
ark:/48912/00130000174rt
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Human Reproduction
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
http://www.oxfordjournals.org/access_purchase/self-archiving_policyb.html
eu_rights_str_mv openAccess
rights_invalid_str_mv http://www.oxfordjournals.org/access_purchase/self-archiving_policyb.html
dc.format.none.fl_str_mv 33-46
dc.publisher.none.fl_str_mv Oxford Univ Press
publisher.none.fl_str_mv Oxford Univ Press
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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