Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1158/1078-0432.CCR-07-4372 http://repositorio.unifesp.br/handle/11600/30812 |
Resumo: | Purpose: To identify papillary thyroid carcinoma (PTC)-associated transcripts, we compared the gene expression profiles of three Serial Analysis of Gene Expression libraries generated from thyroid tumors and a normal thyroid tissue.Experimental Design: Selected transcripts were validated in a panel of 57 thyroid tumors using quantitative PCR (qPCR). An independent set of 71 paraffin-embedded sections was used for validation using immunohistochemical analysis. To determine if PTC-associated gene expression could predict lymph node involvement, a separate cohort of 130 primary PTC (54 metastatic and 76 nonmetastatic) was investigated. the BRAF(V600E) mutational status was compared with qPCR data to identify genes that might be regulated by abnormal BRAF/MEK/extracellular signal-regulated kinase signaling.Results: We identified and validated new PTC-associated transcripts. Three genes (CST6, CXCL14, and DHRS3) are strongly associated with PTC. Immunohistochemical analysis of CXCL14 confirmed the qPCR data and showed protein expression in PTC epithelial cells. We also observed that CST6, CXCL14, DHRS3, and SPP1 were associated with PTC lymph node metastasis, with CST6, CXCL14, and SPP1 being positively correlated with metastasis and DHRS3 being negatively correlated. Finally, we found a strong correlation between CST6 and CXCL14 expression and BRAF(V600E) mutational status, suggesting that these genes may be induced subsequently to BRAF activation and therefore may be downstream in the BRAF/MEK/extracellular signal-regulated kinase signaling pathway.Conclusion: CST6, CXCL14, DHRS3, and SPP1 may play a role in PTC pathogenesis and progression and are possible molecular targets for FTC therapy. |
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Repositório Institucional da UNIFESP |
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Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasisPurpose: To identify papillary thyroid carcinoma (PTC)-associated transcripts, we compared the gene expression profiles of three Serial Analysis of Gene Expression libraries generated from thyroid tumors and a normal thyroid tissue.Experimental Design: Selected transcripts were validated in a panel of 57 thyroid tumors using quantitative PCR (qPCR). An independent set of 71 paraffin-embedded sections was used for validation using immunohistochemical analysis. To determine if PTC-associated gene expression could predict lymph node involvement, a separate cohort of 130 primary PTC (54 metastatic and 76 nonmetastatic) was investigated. the BRAF(V600E) mutational status was compared with qPCR data to identify genes that might be regulated by abnormal BRAF/MEK/extracellular signal-regulated kinase signaling.Results: We identified and validated new PTC-associated transcripts. Three genes (CST6, CXCL14, and DHRS3) are strongly associated with PTC. Immunohistochemical analysis of CXCL14 confirmed the qPCR data and showed protein expression in PTC epithelial cells. We also observed that CST6, CXCL14, DHRS3, and SPP1 were associated with PTC lymph node metastasis, with CST6, CXCL14, and SPP1 being positively correlated with metastasis and DHRS3 being negatively correlated. Finally, we found a strong correlation between CST6 and CXCL14 expression and BRAF(V600E) mutational status, suggesting that these genes may be induced subsequently to BRAF activation and therefore may be downstream in the BRAF/MEK/extracellular signal-regulated kinase signaling pathway.Conclusion: CST6, CXCL14, DHRS3, and SPP1 may play a role in PTC pathogenesis and progression and are possible molecular targets for FTC therapy.Universidade Federal de São Paulo, Genet Bases Thyroid Tumor Lab, Div Genet, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Endocrinol, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Head & Neck Surg, BR-04039032 São Paulo, BrazilUniv São Paulo, Sch Med, Dept Surg, São Paulo, BrazilJohns Hopkins Univ, Sch Med, Dept Neurosurg, Baltimore, MD 21205 USAUniversidade Federal de São Paulo, Genet Bases Thyroid Tumor Lab, Div Genet, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Endocrinol, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Head & Neck Surg, BR-04039032 São Paulo, BrazilWeb of ScienceAmer Assoc Cancer ResearchUniversidade Federal de São Paulo (UNIFESP)Universidade de São Paulo (USP)Johns Hopkins UnivOler, Gisele [UNIFESP]Camacho, Cleber P. [UNIFESP]Hojaij, Flavio C. [UNIFESP]Michaluart, PedroRiggins, Gregory J.Cerutti, Janete M. [UNIFESP]2016-01-24T13:51:34Z2016-01-24T13:51:34Z2008-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion4735-4742http://dx.doi.org/10.1158/1078-0432.CCR-07-4372Clinical Cancer Research. Philadelphia: Amer Assoc Cancer Research, v. 14, n. 15, p. 4735-4742, 2008.10.1158/1078-0432.CCR-07-43721078-0432http://repositorio.unifesp.br/handle/11600/30812WOS:000258217200010engClinical Cancer Researchinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2016-01-24T11:51:34Zoai:repositorio.unifesp.br/:11600/30812Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652016-01-24T11:51:34Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
title |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
spellingShingle |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis Oler, Gisele [UNIFESP] |
title_short |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
title_full |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
title_fullStr |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
title_full_unstemmed |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
title_sort |
Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis |
author |
Oler, Gisele [UNIFESP] |
author_facet |
Oler, Gisele [UNIFESP] Camacho, Cleber P. [UNIFESP] Hojaij, Flavio C. [UNIFESP] Michaluart, Pedro Riggins, Gregory J. Cerutti, Janete M. [UNIFESP] |
author_role |
author |
author2 |
Camacho, Cleber P. [UNIFESP] Hojaij, Flavio C. [UNIFESP] Michaluart, Pedro Riggins, Gregory J. Cerutti, Janete M. [UNIFESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Paulo (UNIFESP) Universidade de São Paulo (USP) Johns Hopkins Univ |
dc.contributor.author.fl_str_mv |
Oler, Gisele [UNIFESP] Camacho, Cleber P. [UNIFESP] Hojaij, Flavio C. [UNIFESP] Michaluart, Pedro Riggins, Gregory J. Cerutti, Janete M. [UNIFESP] |
description |
Purpose: To identify papillary thyroid carcinoma (PTC)-associated transcripts, we compared the gene expression profiles of three Serial Analysis of Gene Expression libraries generated from thyroid tumors and a normal thyroid tissue.Experimental Design: Selected transcripts were validated in a panel of 57 thyroid tumors using quantitative PCR (qPCR). An independent set of 71 paraffin-embedded sections was used for validation using immunohistochemical analysis. To determine if PTC-associated gene expression could predict lymph node involvement, a separate cohort of 130 primary PTC (54 metastatic and 76 nonmetastatic) was investigated. the BRAF(V600E) mutational status was compared with qPCR data to identify genes that might be regulated by abnormal BRAF/MEK/extracellular signal-regulated kinase signaling.Results: We identified and validated new PTC-associated transcripts. Three genes (CST6, CXCL14, and DHRS3) are strongly associated with PTC. Immunohistochemical analysis of CXCL14 confirmed the qPCR data and showed protein expression in PTC epithelial cells. We also observed that CST6, CXCL14, DHRS3, and SPP1 were associated with PTC lymph node metastasis, with CST6, CXCL14, and SPP1 being positively correlated with metastasis and DHRS3 being negatively correlated. Finally, we found a strong correlation between CST6 and CXCL14 expression and BRAF(V600E) mutational status, suggesting that these genes may be induced subsequently to BRAF activation and therefore may be downstream in the BRAF/MEK/extracellular signal-regulated kinase signaling pathway.Conclusion: CST6, CXCL14, DHRS3, and SPP1 may play a role in PTC pathogenesis and progression and are possible molecular targets for FTC therapy. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-08-01 2016-01-24T13:51:34Z 2016-01-24T13:51:34Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1158/1078-0432.CCR-07-4372 Clinical Cancer Research. Philadelphia: Amer Assoc Cancer Research, v. 14, n. 15, p. 4735-4742, 2008. 10.1158/1078-0432.CCR-07-4372 1078-0432 http://repositorio.unifesp.br/handle/11600/30812 WOS:000258217200010 |
url |
http://dx.doi.org/10.1158/1078-0432.CCR-07-4372 http://repositorio.unifesp.br/handle/11600/30812 |
identifier_str_mv |
Clinical Cancer Research. Philadelphia: Amer Assoc Cancer Research, v. 14, n. 15, p. 4735-4742, 2008. 10.1158/1078-0432.CCR-07-4372 1078-0432 WOS:000258217200010 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Clinical Cancer Research |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
4735-4742 |
dc.publisher.none.fl_str_mv |
Amer Assoc Cancer Research |
publisher.none.fl_str_mv |
Amer Assoc Cancer Research |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268386207596544 |