Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis

Detalhes bibliográficos
Autor(a) principal: Oler, Gisele [UNIFESP]
Data de Publicação: 2008
Outros Autores: Camacho, Cleber P. [UNIFESP], Hojaij, Flavio C. [UNIFESP], Michaluart, Pedro, Riggins, Gregory J., Cerutti, Janete M. [UNIFESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://dx.doi.org/10.1158/1078-0432.CCR-07-4372
http://repositorio.unifesp.br/handle/11600/30812
Resumo: Purpose: To identify papillary thyroid carcinoma (PTC)-associated transcripts, we compared the gene expression profiles of three Serial Analysis of Gene Expression libraries generated from thyroid tumors and a normal thyroid tissue.Experimental Design: Selected transcripts were validated in a panel of 57 thyroid tumors using quantitative PCR (qPCR). An independent set of 71 paraffin-embedded sections was used for validation using immunohistochemical analysis. To determine if PTC-associated gene expression could predict lymph node involvement, a separate cohort of 130 primary PTC (54 metastatic and 76 nonmetastatic) was investigated. the BRAF(V600E) mutational status was compared with qPCR data to identify genes that might be regulated by abnormal BRAF/MEK/extracellular signal-regulated kinase signaling.Results: We identified and validated new PTC-associated transcripts. Three genes (CST6, CXCL14, and DHRS3) are strongly associated with PTC. Immunohistochemical analysis of CXCL14 confirmed the qPCR data and showed protein expression in PTC epithelial cells. We also observed that CST6, CXCL14, DHRS3, and SPP1 were associated with PTC lymph node metastasis, with CST6, CXCL14, and SPP1 being positively correlated with metastasis and DHRS3 being negatively correlated. Finally, we found a strong correlation between CST6 and CXCL14 expression and BRAF(V600E) mutational status, suggesting that these genes may be induced subsequently to BRAF activation and therefore may be downstream in the BRAF/MEK/extracellular signal-regulated kinase signaling pathway.Conclusion: CST6, CXCL14, DHRS3, and SPP1 may play a role in PTC pathogenesis and progression and are possible molecular targets for FTC therapy.
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spelling Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasisPurpose: To identify papillary thyroid carcinoma (PTC)-associated transcripts, we compared the gene expression profiles of three Serial Analysis of Gene Expression libraries generated from thyroid tumors and a normal thyroid tissue.Experimental Design: Selected transcripts were validated in a panel of 57 thyroid tumors using quantitative PCR (qPCR). An independent set of 71 paraffin-embedded sections was used for validation using immunohistochemical analysis. To determine if PTC-associated gene expression could predict lymph node involvement, a separate cohort of 130 primary PTC (54 metastatic and 76 nonmetastatic) was investigated. the BRAF(V600E) mutational status was compared with qPCR data to identify genes that might be regulated by abnormal BRAF/MEK/extracellular signal-regulated kinase signaling.Results: We identified and validated new PTC-associated transcripts. Three genes (CST6, CXCL14, and DHRS3) are strongly associated with PTC. Immunohistochemical analysis of CXCL14 confirmed the qPCR data and showed protein expression in PTC epithelial cells. We also observed that CST6, CXCL14, DHRS3, and SPP1 were associated with PTC lymph node metastasis, with CST6, CXCL14, and SPP1 being positively correlated with metastasis and DHRS3 being negatively correlated. Finally, we found a strong correlation between CST6 and CXCL14 expression and BRAF(V600E) mutational status, suggesting that these genes may be induced subsequently to BRAF activation and therefore may be downstream in the BRAF/MEK/extracellular signal-regulated kinase signaling pathway.Conclusion: CST6, CXCL14, DHRS3, and SPP1 may play a role in PTC pathogenesis and progression and are possible molecular targets for FTC therapy.Universidade Federal de São Paulo, Genet Bases Thyroid Tumor Lab, Div Genet, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Endocrinol, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Head & Neck Surg, BR-04039032 São Paulo, BrazilUniv São Paulo, Sch Med, Dept Surg, São Paulo, BrazilJohns Hopkins Univ, Sch Med, Dept Neurosurg, Baltimore, MD 21205 USAUniversidade Federal de São Paulo, Genet Bases Thyroid Tumor Lab, Div Genet, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Endocrinol, BR-04039032 São Paulo, BrazilUniversidade Federal de São Paulo, Div Head & Neck Surg, BR-04039032 São Paulo, BrazilWeb of ScienceAmer Assoc Cancer ResearchUniversidade Federal de São Paulo (UNIFESP)Universidade de São Paulo (USP)Johns Hopkins UnivOler, Gisele [UNIFESP]Camacho, Cleber P. [UNIFESP]Hojaij, Flavio C. [UNIFESP]Michaluart, PedroRiggins, Gregory J.Cerutti, Janete M. [UNIFESP]2016-01-24T13:51:34Z2016-01-24T13:51:34Z2008-08-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion4735-4742http://dx.doi.org/10.1158/1078-0432.CCR-07-4372Clinical Cancer Research. Philadelphia: Amer Assoc Cancer Research, v. 14, n. 15, p. 4735-4742, 2008.10.1158/1078-0432.CCR-07-43721078-0432http://repositorio.unifesp.br/handle/11600/30812WOS:000258217200010engClinical Cancer Researchinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2016-01-24T11:51:34Zoai:repositorio.unifesp.br/:11600/30812Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652016-01-24T11:51:34Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
title Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
spellingShingle Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
Oler, Gisele [UNIFESP]
title_short Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
title_full Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
title_fullStr Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
title_full_unstemmed Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
title_sort Gene expression profiling of papillary thyroid carcinoma identifies transcripts correlated with BRAF mutational status and lymph node metastasis
author Oler, Gisele [UNIFESP]
author_facet Oler, Gisele [UNIFESP]
Camacho, Cleber P. [UNIFESP]
Hojaij, Flavio C. [UNIFESP]
Michaluart, Pedro
Riggins, Gregory J.
Cerutti, Janete M. [UNIFESP]
author_role author
author2 Camacho, Cleber P. [UNIFESP]
Hojaij, Flavio C. [UNIFESP]
Michaluart, Pedro
Riggins, Gregory J.
Cerutti, Janete M. [UNIFESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Paulo (UNIFESP)
Universidade de São Paulo (USP)
Johns Hopkins Univ
dc.contributor.author.fl_str_mv Oler, Gisele [UNIFESP]
Camacho, Cleber P. [UNIFESP]
Hojaij, Flavio C. [UNIFESP]
Michaluart, Pedro
Riggins, Gregory J.
Cerutti, Janete M. [UNIFESP]
description Purpose: To identify papillary thyroid carcinoma (PTC)-associated transcripts, we compared the gene expression profiles of three Serial Analysis of Gene Expression libraries generated from thyroid tumors and a normal thyroid tissue.Experimental Design: Selected transcripts were validated in a panel of 57 thyroid tumors using quantitative PCR (qPCR). An independent set of 71 paraffin-embedded sections was used for validation using immunohistochemical analysis. To determine if PTC-associated gene expression could predict lymph node involvement, a separate cohort of 130 primary PTC (54 metastatic and 76 nonmetastatic) was investigated. the BRAF(V600E) mutational status was compared with qPCR data to identify genes that might be regulated by abnormal BRAF/MEK/extracellular signal-regulated kinase signaling.Results: We identified and validated new PTC-associated transcripts. Three genes (CST6, CXCL14, and DHRS3) are strongly associated with PTC. Immunohistochemical analysis of CXCL14 confirmed the qPCR data and showed protein expression in PTC epithelial cells. We also observed that CST6, CXCL14, DHRS3, and SPP1 were associated with PTC lymph node metastasis, with CST6, CXCL14, and SPP1 being positively correlated with metastasis and DHRS3 being negatively correlated. Finally, we found a strong correlation between CST6 and CXCL14 expression and BRAF(V600E) mutational status, suggesting that these genes may be induced subsequently to BRAF activation and therefore may be downstream in the BRAF/MEK/extracellular signal-regulated kinase signaling pathway.Conclusion: CST6, CXCL14, DHRS3, and SPP1 may play a role in PTC pathogenesis and progression and are possible molecular targets for FTC therapy.
publishDate 2008
dc.date.none.fl_str_mv 2008-08-01
2016-01-24T13:51:34Z
2016-01-24T13:51:34Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1158/1078-0432.CCR-07-4372
Clinical Cancer Research. Philadelphia: Amer Assoc Cancer Research, v. 14, n. 15, p. 4735-4742, 2008.
10.1158/1078-0432.CCR-07-4372
1078-0432
http://repositorio.unifesp.br/handle/11600/30812
WOS:000258217200010
url http://dx.doi.org/10.1158/1078-0432.CCR-07-4372
http://repositorio.unifesp.br/handle/11600/30812
identifier_str_mv Clinical Cancer Research. Philadelphia: Amer Assoc Cancer Research, v. 14, n. 15, p. 4735-4742, 2008.
10.1158/1078-0432.CCR-07-4372
1078-0432
WOS:000258217200010
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Clinical Cancer Research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 4735-4742
dc.publisher.none.fl_str_mv Amer Assoc Cancer Research
publisher.none.fl_str_mv Amer Assoc Cancer Research
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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