2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B

Detalhes bibliográficos
Autor(a) principal: Caracelli, Ignez
Data de Publicação: 2010
Outros Autores: Zukerman-Schpector, Julio, Maganhi, Stella H, Stefani, Hélio A, Guadagnin, Rafael Carlos [UNIFESP], Tiekink, Edward R. T
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
dARK ID: ark:/48912/001300000kt1h
DOI: 10.1590/S0103-50532010001100018
Texto Completo: http://dx.doi.org/10.1590/S0103-50532010001100018
http://repositorio.unifesp.br/handle/11600/5472
Resumo: Crystallography shows that the Te atom in each of (p-tol)Te[C(H)=C(Cl)Ph]X2, for X = Cl (1), Br (2) and I (3), is within a distorted Ψ-pentagonal bipyramidal geometry. An E configuration for the vinyl group in (1) precludes the formation of an intramolecular Te···Cl interaction so that an intramolecular Te···π interaction is found instead. The coordination environment features a linear Cl-Te-Cl arrangement with the pentagonal plane defined by the two C atoms of the organic substituents, an intermolecular Te···Cl contact, a Te···π interaction and a stereochemically active lone pair of electrons. In the X = Br (2) and I (3) structures, similar coordination geometries are found but the Te···π contact is replaced by an intramolecular Te···Cl contact owing to the adoption of a Z configuration about the vinyl bond. The differences in structure are readily explained in terms of electronic effects. Docking studies of cathepsin B with (1')-(3'), i.e. 1-3 less one Te-bound halide, show efficient binding through the agency of covalent Te-S Cys29 bonds with stabilization afforded by a combination of N-H···π, C-H···π and Cl vinyl···H interactions. These results comparable favorably with known inhibitors of cathepsin B suggesting the title compounds have potential biological activity.
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spelling 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin Borganotellurium-dihalidesdocking studiescathepsin Bcrystal structuressupramolecular arrangementsCrystallography shows that the Te atom in each of (p-tol)Te[C(H)=C(Cl)Ph]X2, for X = Cl (1), Br (2) and I (3), is within a distorted Ψ-pentagonal bipyramidal geometry. An E configuration for the vinyl group in (1) precludes the formation of an intramolecular Te···Cl interaction so that an intramolecular Te···π interaction is found instead. The coordination environment features a linear Cl-Te-Cl arrangement with the pentagonal plane defined by the two C atoms of the organic substituents, an intermolecular Te···Cl contact, a Te···π interaction and a stereochemically active lone pair of electrons. In the X = Br (2) and I (3) structures, similar coordination geometries are found but the Te···π contact is replaced by an intramolecular Te···Cl contact owing to the adoption of a Z configuration about the vinyl bond. The differences in structure are readily explained in terms of electronic effects. Docking studies of cathepsin B with (1')-(3'), i.e. 1-3 less one Te-bound halide, show efficient binding through the agency of covalent Te-S Cys29 bonds with stabilization afforded by a combination of N-H···π, C-H···π and Cl vinyl···H interactions. These results comparable favorably with known inhibitors of cathepsin B suggesting the title compounds have potential biological activity.Os estudos cristalográficos mostram que o poliedro de coordenação ao redor do átomo de Te, em cada um dos compostos (p-tol)Te[C(H)=C(Cl)Ph]X2, com X = Cl (1), Br (2) e I (3), é uma Ψ-bipirâmide pentagonal distorcida. O grupo vinil em (1) adota uma configuração E o que impede a formação de uma interação intramolecular Te···Cl e em seu lugar é encontrada uma interação intramolecular Te···π. O poliedro de coordenação é formado por um arranjo linear Cl-Te-Cl com o plano pentagonal definido por dois átomos de C dos substituintes orgânicos, um contato intermolecular Te···Cl, uma interação Te···π e um par isolado de elétrons estereoquimicamente ativo. Geometrias de coordenação semelhantes são encontradas para as estruturas com X = Br (2) e I (3), mas a interação π é substituída por uma interação intramolecular Te···Cl devido à adoção de uma configuração Z em torno da ligação vinil. As diferenças nas estruturas são facilmente explicadas em termos de efeitos eletrônicos. Estudos de docking em catepsina B com (1')-(3'), ou seja, compostos 1 a 3 em que há um haleto a menos ligado ao átomo de Te, mostram que há uma ligação eficiente com a proteína pela formação da ligação covalente Te-S Cys29 com a estabilização proporcionada por uma combinação de interações N-H···π, C-H···π e Cl vinyl···H. Estes resultados são comparáveis aos obtidos com inibidores conhecidos da catepsina B o que sugere que os compostos estudados têm potencial atividade biológica.Universidade Federal de São Carlos Departamento de FísicaUniversidade Federal de São Carlos Departamento de Química Laboratório de Cristalografia, Estereodinâmica e Modelagem MolecularUniversidade de São Paulo Faculdade de Ciências Farmacêuticas Departamento de FarmáciaUniversidade Federal de São Paulo (UNIFESP) Departamento de QuímicaUniversity of Malaya Department of ChemistryUNIFESP, Depto. de QuímicaSciELOFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FAPESP: 07/59404-2CNPq: 300613/2007CNPq: 306532/2009-3CNPq: 140925/2009-0CAPES: 808/2009Sociedade Brasileira de QuímicaUniversidade Federal de São Carlos Departamento de FísicaUniversidade Federal de São Carlos Departamento de Química Laboratório de Cristalografia, Estereodinâmica e Modelagem MolecularUniversidade de São Paulo (USP)Universidade Federal de São Paulo (UNIFESP)University of Malaya Department of ChemistryCaracelli, IgnezZukerman-Schpector, JulioMaganhi, Stella HStefani, Hélio AGuadagnin, Rafael Carlos [UNIFESP]Tiekink, Edward R. T2015-06-14T13:41:23Z2015-06-14T13:41:23Z2010-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion2155-2163application/pdfhttp://dx.doi.org/10.1590/S0103-50532010001100018Journal of the Brazilian Chemical Society. Sociedade Brasileira de Química, v. 21, n. 11, p. 2155-2163, 2010.10.1590/S0103-50532010001100018S0103-50532010001100018.pdf0103-5053S0103-50532010001100018http://repositorio.unifesp.br/handle/11600/5472WOS:000284094500019ark:/48912/001300000kt1hengJournal of the Brazilian Chemical Societyinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-08-06T02:46:54Zoai:repositorio.unifesp.br/:11600/5472Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-12-11T20:23:43.030116Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.none.fl_str_mv 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
title 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
spellingShingle 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
Caracelli, Ignez
organotellurium-dihalides
docking studies
cathepsin B
crystal structures
supramolecular arrangements
Caracelli, Ignez
organotellurium-dihalides
docking studies
cathepsin B
crystal structures
supramolecular arrangements
title_short 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
title_full 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
title_fullStr 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
title_full_unstemmed 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
title_sort 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
author Caracelli, Ignez
author_facet Caracelli, Ignez
Caracelli, Ignez
Zukerman-Schpector, Julio
Maganhi, Stella H
Stefani, Hélio A
Guadagnin, Rafael Carlos [UNIFESP]
Tiekink, Edward R. T
Zukerman-Schpector, Julio
Maganhi, Stella H
Stefani, Hélio A
Guadagnin, Rafael Carlos [UNIFESP]
Tiekink, Edward R. T
author_role author
author2 Zukerman-Schpector, Julio
Maganhi, Stella H
Stefani, Hélio A
Guadagnin, Rafael Carlos [UNIFESP]
Tiekink, Edward R. T
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Carlos Departamento de Física
Universidade Federal de São Carlos Departamento de Química Laboratório de Cristalografia, Estereodinâmica e Modelagem Molecular
Universidade de São Paulo (USP)
Universidade Federal de São Paulo (UNIFESP)
University of Malaya Department of Chemistry
dc.contributor.author.fl_str_mv Caracelli, Ignez
Zukerman-Schpector, Julio
Maganhi, Stella H
Stefani, Hélio A
Guadagnin, Rafael Carlos [UNIFESP]
Tiekink, Edward R. T
dc.subject.por.fl_str_mv organotellurium-dihalides
docking studies
cathepsin B
crystal structures
supramolecular arrangements
topic organotellurium-dihalides
docking studies
cathepsin B
crystal structures
supramolecular arrangements
description Crystallography shows that the Te atom in each of (p-tol)Te[C(H)=C(Cl)Ph]X2, for X = Cl (1), Br (2) and I (3), is within a distorted Ψ-pentagonal bipyramidal geometry. An E configuration for the vinyl group in (1) precludes the formation of an intramolecular Te···Cl interaction so that an intramolecular Te···π interaction is found instead. The coordination environment features a linear Cl-Te-Cl arrangement with the pentagonal plane defined by the two C atoms of the organic substituents, an intermolecular Te···Cl contact, a Te···π interaction and a stereochemically active lone pair of electrons. In the X = Br (2) and I (3) structures, similar coordination geometries are found but the Te···π contact is replaced by an intramolecular Te···Cl contact owing to the adoption of a Z configuration about the vinyl bond. The differences in structure are readily explained in terms of electronic effects. Docking studies of cathepsin B with (1')-(3'), i.e. 1-3 less one Te-bound halide, show efficient binding through the agency of covalent Te-S Cys29 bonds with stabilization afforded by a combination of N-H···π, C-H···π and Cl vinyl···H interactions. These results comparable favorably with known inhibitors of cathepsin B suggesting the title compounds have potential biological activity.
publishDate 2010
dc.date.none.fl_str_mv 2010-01-01
2015-06-14T13:41:23Z
2015-06-14T13:41:23Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S0103-50532010001100018
Journal of the Brazilian Chemical Society. Sociedade Brasileira de Química, v. 21, n. 11, p. 2155-2163, 2010.
10.1590/S0103-50532010001100018
S0103-50532010001100018.pdf
0103-5053
S0103-50532010001100018
http://repositorio.unifesp.br/handle/11600/5472
WOS:000284094500019
dc.identifier.dark.fl_str_mv ark:/48912/001300000kt1h
url http://dx.doi.org/10.1590/S0103-50532010001100018
http://repositorio.unifesp.br/handle/11600/5472
identifier_str_mv Journal of the Brazilian Chemical Society. Sociedade Brasileira de Química, v. 21, n. 11, p. 2155-2163, 2010.
10.1590/S0103-50532010001100018
S0103-50532010001100018.pdf
0103-5053
S0103-50532010001100018
WOS:000284094500019
ark:/48912/001300000kt1h
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of the Brazilian Chemical Society
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 2155-2163
application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Química
publisher.none.fl_str_mv Sociedade Brasileira de Química
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv biblioteca.csp@unifesp.br
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dc.identifier.doi.none.fl_str_mv 10.1590/S0103-50532010001100018