2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B
Autor(a) principal: | |
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Data de Publicação: | 2010 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
dARK ID: | ark:/48912/001300000kt1h |
DOI: | 10.1590/S0103-50532010001100018 |
Texto Completo: | http://dx.doi.org/10.1590/S0103-50532010001100018 http://repositorio.unifesp.br/handle/11600/5472 |
Resumo: | Crystallography shows that the Te atom in each of (p-tol)Te[C(H)=C(Cl)Ph]X2, for X = Cl (1), Br (2) and I (3), is within a distorted Ψ-pentagonal bipyramidal geometry. An E configuration for the vinyl group in (1) precludes the formation of an intramolecular Te···Cl interaction so that an intramolecular Te···π interaction is found instead. The coordination environment features a linear Cl-Te-Cl arrangement with the pentagonal plane defined by the two C atoms of the organic substituents, an intermolecular Te···Cl contact, a Te···π interaction and a stereochemically active lone pair of electrons. In the X = Br (2) and I (3) structures, similar coordination geometries are found but the Te···π contact is replaced by an intramolecular Te···Cl contact owing to the adoption of a Z configuration about the vinyl bond. The differences in structure are readily explained in terms of electronic effects. Docking studies of cathepsin B with (1')-(3'), i.e. 1-3 less one Te-bound halide, show efficient binding through the agency of covalent Te-S Cys29 bonds with stabilization afforded by a combination of N-H···π, C-H···π and Cl vinyl···H interactions. These results comparable favorably with known inhibitors of cathepsin B suggesting the title compounds have potential biological activity. |
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2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin Borganotellurium-dihalidesdocking studiescathepsin Bcrystal structuressupramolecular arrangementsCrystallography shows that the Te atom in each of (p-tol)Te[C(H)=C(Cl)Ph]X2, for X = Cl (1), Br (2) and I (3), is within a distorted Ψ-pentagonal bipyramidal geometry. An E configuration for the vinyl group in (1) precludes the formation of an intramolecular Te···Cl interaction so that an intramolecular Te···π interaction is found instead. The coordination environment features a linear Cl-Te-Cl arrangement with the pentagonal plane defined by the two C atoms of the organic substituents, an intermolecular Te···Cl contact, a Te···π interaction and a stereochemically active lone pair of electrons. In the X = Br (2) and I (3) structures, similar coordination geometries are found but the Te···π contact is replaced by an intramolecular Te···Cl contact owing to the adoption of a Z configuration about the vinyl bond. The differences in structure are readily explained in terms of electronic effects. Docking studies of cathepsin B with (1')-(3'), i.e. 1-3 less one Te-bound halide, show efficient binding through the agency of covalent Te-S Cys29 bonds with stabilization afforded by a combination of N-H···π, C-H···π and Cl vinyl···H interactions. These results comparable favorably with known inhibitors of cathepsin B suggesting the title compounds have potential biological activity.Os estudos cristalográficos mostram que o poliedro de coordenação ao redor do átomo de Te, em cada um dos compostos (p-tol)Te[C(H)=C(Cl)Ph]X2, com X = Cl (1), Br (2) e I (3), é uma Ψ-bipirâmide pentagonal distorcida. O grupo vinil em (1) adota uma configuração E o que impede a formação de uma interação intramolecular Te···Cl e em seu lugar é encontrada uma interação intramolecular Te···π. O poliedro de coordenação é formado por um arranjo linear Cl-Te-Cl com o plano pentagonal definido por dois átomos de C dos substituintes orgânicos, um contato intermolecular Te···Cl, uma interação Te···π e um par isolado de elétrons estereoquimicamente ativo. Geometrias de coordenação semelhantes são encontradas para as estruturas com X = Br (2) e I (3), mas a interação π é substituída por uma interação intramolecular Te···Cl devido à adoção de uma configuração Z em torno da ligação vinil. As diferenças nas estruturas são facilmente explicadas em termos de efeitos eletrônicos. Estudos de docking em catepsina B com (1')-(3'), ou seja, compostos 1 a 3 em que há um haleto a menos ligado ao átomo de Te, mostram que há uma ligação eficiente com a proteína pela formação da ligação covalente Te-S Cys29 com a estabilização proporcionada por uma combinação de interações N-H···π, C-H···π e Cl vinyl···H. Estes resultados são comparáveis aos obtidos com inibidores conhecidos da catepsina B o que sugere que os compostos estudados têm potencial atividade biológica.Universidade Federal de São Carlos Departamento de FísicaUniversidade Federal de São Carlos Departamento de Química Laboratório de Cristalografia, Estereodinâmica e Modelagem MolecularUniversidade de São Paulo Faculdade de Ciências Farmacêuticas Departamento de FarmáciaUniversidade Federal de São Paulo (UNIFESP) Departamento de QuímicaUniversity of Malaya Department of ChemistryUNIFESP, Depto. de QuímicaSciELOFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FAPESP: 07/59404-2CNPq: 300613/2007CNPq: 306532/2009-3CNPq: 140925/2009-0CAPES: 808/2009Sociedade Brasileira de QuímicaUniversidade Federal de São Carlos Departamento de FísicaUniversidade Federal de São Carlos Departamento de Química Laboratório de Cristalografia, Estereodinâmica e Modelagem MolecularUniversidade de São Paulo (USP)Universidade Federal de São Paulo (UNIFESP)University of Malaya Department of ChemistryCaracelli, IgnezZukerman-Schpector, JulioMaganhi, Stella HStefani, Hélio AGuadagnin, Rafael Carlos [UNIFESP]Tiekink, Edward R. T2015-06-14T13:41:23Z2015-06-14T13:41:23Z2010-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion2155-2163application/pdfhttp://dx.doi.org/10.1590/S0103-50532010001100018Journal of the Brazilian Chemical Society. Sociedade Brasileira de Química, v. 21, n. 11, p. 2155-2163, 2010.10.1590/S0103-50532010001100018S0103-50532010001100018.pdf0103-5053S0103-50532010001100018http://repositorio.unifesp.br/handle/11600/5472WOS:000284094500019ark:/48912/001300000kt1hengJournal of the Brazilian Chemical Societyinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2024-08-06T02:46:54Zoai:repositorio.unifesp.br/:11600/5472Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652024-12-11T20:23:43.030116Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
title |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
spellingShingle |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B Caracelli, Ignez organotellurium-dihalides docking studies cathepsin B crystal structures supramolecular arrangements Caracelli, Ignez organotellurium-dihalides docking studies cathepsin B crystal structures supramolecular arrangements |
title_short |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
title_full |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
title_fullStr |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
title_full_unstemmed |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B 2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
title_sort |
2-chlorovinyl tellurium dihalides, (p-tol)Te[C(H)=C(Cl)Ph]X2 for X = Cl, Br and I: variable coordination environments, supramolecular structures and docking studies in cathepsin B |
author |
Caracelli, Ignez |
author_facet |
Caracelli, Ignez Caracelli, Ignez Zukerman-Schpector, Julio Maganhi, Stella H Stefani, Hélio A Guadagnin, Rafael Carlos [UNIFESP] Tiekink, Edward R. T Zukerman-Schpector, Julio Maganhi, Stella H Stefani, Hélio A Guadagnin, Rafael Carlos [UNIFESP] Tiekink, Edward R. T |
author_role |
author |
author2 |
Zukerman-Schpector, Julio Maganhi, Stella H Stefani, Hélio A Guadagnin, Rafael Carlos [UNIFESP] Tiekink, Edward R. T |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Carlos Departamento de Física Universidade Federal de São Carlos Departamento de Química Laboratório de Cristalografia, Estereodinâmica e Modelagem Molecular Universidade de São Paulo (USP) Universidade Federal de São Paulo (UNIFESP) University of Malaya Department of Chemistry |
dc.contributor.author.fl_str_mv |
Caracelli, Ignez Zukerman-Schpector, Julio Maganhi, Stella H Stefani, Hélio A Guadagnin, Rafael Carlos [UNIFESP] Tiekink, Edward R. T |
dc.subject.por.fl_str_mv |
organotellurium-dihalides docking studies cathepsin B crystal structures supramolecular arrangements |
topic |
organotellurium-dihalides docking studies cathepsin B crystal structures supramolecular arrangements |
description |
Crystallography shows that the Te atom in each of (p-tol)Te[C(H)=C(Cl)Ph]X2, for X = Cl (1), Br (2) and I (3), is within a distorted Ψ-pentagonal bipyramidal geometry. An E configuration for the vinyl group in (1) precludes the formation of an intramolecular Te···Cl interaction so that an intramolecular Te···π interaction is found instead. The coordination environment features a linear Cl-Te-Cl arrangement with the pentagonal plane defined by the two C atoms of the organic substituents, an intermolecular Te···Cl contact, a Te···π interaction and a stereochemically active lone pair of electrons. In the X = Br (2) and I (3) structures, similar coordination geometries are found but the Te···π contact is replaced by an intramolecular Te···Cl contact owing to the adoption of a Z configuration about the vinyl bond. The differences in structure are readily explained in terms of electronic effects. Docking studies of cathepsin B with (1')-(3'), i.e. 1-3 less one Te-bound halide, show efficient binding through the agency of covalent Te-S Cys29 bonds with stabilization afforded by a combination of N-H···π, C-H···π and Cl vinyl···H interactions. These results comparable favorably with known inhibitors of cathepsin B suggesting the title compounds have potential biological activity. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010-01-01 2015-06-14T13:41:23Z 2015-06-14T13:41:23Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S0103-50532010001100018 Journal of the Brazilian Chemical Society. Sociedade Brasileira de Química, v. 21, n. 11, p. 2155-2163, 2010. 10.1590/S0103-50532010001100018 S0103-50532010001100018.pdf 0103-5053 S0103-50532010001100018 http://repositorio.unifesp.br/handle/11600/5472 WOS:000284094500019 |
dc.identifier.dark.fl_str_mv |
ark:/48912/001300000kt1h |
url |
http://dx.doi.org/10.1590/S0103-50532010001100018 http://repositorio.unifesp.br/handle/11600/5472 |
identifier_str_mv |
Journal of the Brazilian Chemical Society. Sociedade Brasileira de Química, v. 21, n. 11, p. 2155-2163, 2010. 10.1590/S0103-50532010001100018 S0103-50532010001100018.pdf 0103-5053 S0103-50532010001100018 WOS:000284094500019 ark:/48912/001300000kt1h |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of the Brazilian Chemical Society |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
2155-2163 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
publisher.none.fl_str_mv |
Sociedade Brasileira de Química |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
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1822183940573626368 |
dc.identifier.doi.none.fl_str_mv |
10.1590/S0103-50532010001100018 |