Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III
Autor(a) principal: | |
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Data de Publicação: | 2002 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNIFESP |
Texto Completo: | http://dx.doi.org/10.1042/BJ20020023 http://repositorio.unifesp.br/handle/11600/26957 |
Resumo: | Internally quenched fluorogenic (IQF) peptides bearing the fluorescence donor/acceptor pair o-aminobenzoic acid (Abz)/N-(2,4-dinitrophenyl)ethylenediamine (EDDnp) at N- and C-terminal ends were synthesized containing heparin-binding sites from the human serpins kallistatin and antithrombin, as well as consensus heparin-binding sequences (Cardin clusters). the dissociation constant (K-d), as well as the stoichiometry for the heparin-peptide complexes, was determined directly by measuring the decrease in fluorescence of the peptide solution. Experimental procedures were as sensitive as those used to follow the fluorescence change of tryptophan in heparin-binding proteins. the conformation of the peptides and the heparin-peptide complexes were obtained from measurements of time-resolved fluorescence decay and CD spectra. Kallistatin (Arg(300)-Pro(319))-derived peptide (HC2) and one derived from antithrombin III helix D [(AT3D), corresponding to Ser(112)-Lys(139)], which are the heparin-binding sites in these serpins, showed significant affinity for 4500 Da heparin, for which K-d values were 17 nM and 100 nM respectively. the CD spectra of the heparin-HC2 peptide complex did not show any significant alpha-helix content, different from the situation with peptide AT3D, for which complex-formation with heparin resulted in 24% alpha-helix content. the end-to-end distance distribution and the time-resolved fluorescence-decay measurements agree with the CD spectra and K-d values. the synthetic alpha-methyl glycoside pentasaccharide AGA*IA(M) (where A represents N,6-O-sulphated alpha-D-glucosamine; G, beta-D-glucuronic acid; A*, N,3, 6-O-sulphated alpha-D-glucosamine; 1, 2-O-sulphated alpha-L-iduronic acid; and A(M), alpha-methyl glycoside of A) also binds to AT3D and other consensus heparin-binding sequences, although with lower affinity. the interaction of IQF peptides with 4500 Da heparin was displaced by protamine. in conclusion, IQF peptides containing Abz/EDDnp as the donor/acceptor fluorescence pair are very promising tools for structure-activity relationship studies on heparin-peptide complexes, as well as for the development of new peptides as heparin reversal-effect compounds. |
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Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin IIIbinding assayglycosaminoglycankallikreintime-resolved fluorescenceInternally quenched fluorogenic (IQF) peptides bearing the fluorescence donor/acceptor pair o-aminobenzoic acid (Abz)/N-(2,4-dinitrophenyl)ethylenediamine (EDDnp) at N- and C-terminal ends were synthesized containing heparin-binding sites from the human serpins kallistatin and antithrombin, as well as consensus heparin-binding sequences (Cardin clusters). the dissociation constant (K-d), as well as the stoichiometry for the heparin-peptide complexes, was determined directly by measuring the decrease in fluorescence of the peptide solution. Experimental procedures were as sensitive as those used to follow the fluorescence change of tryptophan in heparin-binding proteins. the conformation of the peptides and the heparin-peptide complexes were obtained from measurements of time-resolved fluorescence decay and CD spectra. Kallistatin (Arg(300)-Pro(319))-derived peptide (HC2) and one derived from antithrombin III helix D [(AT3D), corresponding to Ser(112)-Lys(139)], which are the heparin-binding sites in these serpins, showed significant affinity for 4500 Da heparin, for which K-d values were 17 nM and 100 nM respectively. the CD spectra of the heparin-HC2 peptide complex did not show any significant alpha-helix content, different from the situation with peptide AT3D, for which complex-formation with heparin resulted in 24% alpha-helix content. the end-to-end distance distribution and the time-resolved fluorescence-decay measurements agree with the CD spectra and K-d values. the synthetic alpha-methyl glycoside pentasaccharide AGA*IA(M) (where A represents N,6-O-sulphated alpha-D-glucosamine; G, beta-D-glucuronic acid; A*, N,3, 6-O-sulphated alpha-D-glucosamine; 1, 2-O-sulphated alpha-L-iduronic acid; and A(M), alpha-methyl glycoside of A) also binds to AT3D and other consensus heparin-binding sequences, although with lower affinity. the interaction of IQF peptides with 4500 Da heparin was displaced by protamine. in conclusion, IQF peptides containing Abz/EDDnp as the donor/acceptor fluorescence pair are very promising tools for structure-activity relationship studies on heparin-peptide complexes, as well as for the development of new peptides as heparin reversal-effect compounds.Universidade Federal de São Paulo, Escola Paulista Med, Dept Biofis, BR-04044020 São Paulo, BrazilCEPID, CAT, Ctr Toxinol Aplicada, BR-05503900 São Paulo, BrazilUMC, CIIB, BR-08780911 Mogi Das Cruzes, SP, BrazilUniv São Paulo, FFCLRP, Dept Fis & Matemat, BR-14040901 Ribeirao Preto, SP, BrazilUniv Paris 05, Fac Pharm, INSERM, U428, F-75270 Paris 06, FranceUniversidade Federal de São Paulo, Escola Paulista Med, Dept Biofis, BR-04044020 São Paulo, BrazilWeb of SciencePortland PressUniversidade Federal de São Paulo (UNIFESP)CEPIDUMCUniversidade de São Paulo (USP)Univ Paris 05Pimenta, Daniel C.Nantes, Iseli L.Souza, Eduardo S. deLe Bonniec, BernardIto, Amando S.Tersariol, Ivarne Luis dos Santos [UNIFESP]Oliveira, VitorJuliano, Maria Aparecida [UNIFESP]Juliano, Luiz [UNIFESP]2016-01-24T12:33:29Z2016-01-24T12:33:29Z2002-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersion435-446http://dx.doi.org/10.1042/BJ20020023Biochemical Journal. London: Portland Press, v. 366, p. 435-446, 2002.10.1042/BJ200200230264-6021http://repositorio.unifesp.br/handle/11600/26957WOS:000177975500007engBiochemical Journalinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP2016-01-24T10:33:29Zoai:repositorio.unifesp.br/:11600/26957Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestbiblioteca.csp@unifesp.bropendoar:34652016-01-24T10:33:29Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false |
dc.title.none.fl_str_mv |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
title |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
spellingShingle |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III Pimenta, Daniel C. binding assay glycosaminoglycan kallikrein time-resolved fluorescence |
title_short |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
title_full |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
title_fullStr |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
title_full_unstemmed |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
title_sort |
Interaction of heparin with internally quenched fluorogenic peptides derived from heparin-binding consensus sequences, kallistatin and anti-thrombin III |
author |
Pimenta, Daniel C. |
author_facet |
Pimenta, Daniel C. Nantes, Iseli L. Souza, Eduardo S. de Le Bonniec, Bernard Ito, Amando S. Tersariol, Ivarne Luis dos Santos [UNIFESP] Oliveira, Vitor Juliano, Maria Aparecida [UNIFESP] Juliano, Luiz [UNIFESP] |
author_role |
author |
author2 |
Nantes, Iseli L. Souza, Eduardo S. de Le Bonniec, Bernard Ito, Amando S. Tersariol, Ivarne Luis dos Santos [UNIFESP] Oliveira, Vitor Juliano, Maria Aparecida [UNIFESP] Juliano, Luiz [UNIFESP] |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de São Paulo (UNIFESP) CEPID UMC Universidade de São Paulo (USP) Univ Paris 05 |
dc.contributor.author.fl_str_mv |
Pimenta, Daniel C. Nantes, Iseli L. Souza, Eduardo S. de Le Bonniec, Bernard Ito, Amando S. Tersariol, Ivarne Luis dos Santos [UNIFESP] Oliveira, Vitor Juliano, Maria Aparecida [UNIFESP] Juliano, Luiz [UNIFESP] |
dc.subject.por.fl_str_mv |
binding assay glycosaminoglycan kallikrein time-resolved fluorescence |
topic |
binding assay glycosaminoglycan kallikrein time-resolved fluorescence |
description |
Internally quenched fluorogenic (IQF) peptides bearing the fluorescence donor/acceptor pair o-aminobenzoic acid (Abz)/N-(2,4-dinitrophenyl)ethylenediamine (EDDnp) at N- and C-terminal ends were synthesized containing heparin-binding sites from the human serpins kallistatin and antithrombin, as well as consensus heparin-binding sequences (Cardin clusters). the dissociation constant (K-d), as well as the stoichiometry for the heparin-peptide complexes, was determined directly by measuring the decrease in fluorescence of the peptide solution. Experimental procedures were as sensitive as those used to follow the fluorescence change of tryptophan in heparin-binding proteins. the conformation of the peptides and the heparin-peptide complexes were obtained from measurements of time-resolved fluorescence decay and CD spectra. Kallistatin (Arg(300)-Pro(319))-derived peptide (HC2) and one derived from antithrombin III helix D [(AT3D), corresponding to Ser(112)-Lys(139)], which are the heparin-binding sites in these serpins, showed significant affinity for 4500 Da heparin, for which K-d values were 17 nM and 100 nM respectively. the CD spectra of the heparin-HC2 peptide complex did not show any significant alpha-helix content, different from the situation with peptide AT3D, for which complex-formation with heparin resulted in 24% alpha-helix content. the end-to-end distance distribution and the time-resolved fluorescence-decay measurements agree with the CD spectra and K-d values. the synthetic alpha-methyl glycoside pentasaccharide AGA*IA(M) (where A represents N,6-O-sulphated alpha-D-glucosamine; G, beta-D-glucuronic acid; A*, N,3, 6-O-sulphated alpha-D-glucosamine; 1, 2-O-sulphated alpha-L-iduronic acid; and A(M), alpha-methyl glycoside of A) also binds to AT3D and other consensus heparin-binding sequences, although with lower affinity. the interaction of IQF peptides with 4500 Da heparin was displaced by protamine. in conclusion, IQF peptides containing Abz/EDDnp as the donor/acceptor fluorescence pair are very promising tools for structure-activity relationship studies on heparin-peptide complexes, as well as for the development of new peptides as heparin reversal-effect compounds. |
publishDate |
2002 |
dc.date.none.fl_str_mv |
2002-09-01 2016-01-24T12:33:29Z 2016-01-24T12:33:29Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1042/BJ20020023 Biochemical Journal. London: Portland Press, v. 366, p. 435-446, 2002. 10.1042/BJ20020023 0264-6021 http://repositorio.unifesp.br/handle/11600/26957 WOS:000177975500007 |
url |
http://dx.doi.org/10.1042/BJ20020023 http://repositorio.unifesp.br/handle/11600/26957 |
identifier_str_mv |
Biochemical Journal. London: Portland Press, v. 366, p. 435-446, 2002. 10.1042/BJ20020023 0264-6021 WOS:000177975500007 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Biochemical Journal |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
435-446 |
dc.publisher.none.fl_str_mv |
Portland Press |
publisher.none.fl_str_mv |
Portland Press |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da UNIFESP instname:Universidade Federal de São Paulo (UNIFESP) instacron:UNIFESP |
instname_str |
Universidade Federal de São Paulo (UNIFESP) |
instacron_str |
UNIFESP |
institution |
UNIFESP |
reponame_str |
Repositório Institucional da UNIFESP |
collection |
Repositório Institucional da UNIFESP |
repository.name.fl_str_mv |
Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP) |
repository.mail.fl_str_mv |
biblioteca.csp@unifesp.br |
_version_ |
1814268442447970304 |