Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA

Detalhes bibliográficos
Autor(a) principal: Schumann, Naiara Araújo Borges
Data de Publicação: 2019
Tipo de documento: Tese
Idioma: por
Título da fonte: Repositório Institucional da UFU
Texto Completo: https://repositorio.ufu.br/handle/123456789/26409
http://dx.doi.org/10.14393/ufu.te.2019.1258
Resumo: Somatic cell nuclear transfer (SCNT) is a commercially available technique of assisted reproductive technology with broad applications. It is still a low-efficiency technique, possibly as a consequence of the epigenetic profile of the somatic genome of the donor cell, which carries characteristic marks of differentiated cells, which hampers correct reprogramming after nuclear transfer. This differentiated cell memory leads to changes in DNA methylation patterns as well as changes in the gene expression profile of important genes during embryonic development. In this study, we analyzed the DNA methylation and gene expression profile of bovine fibroblasts cultured in vitro with DNA toxicity drugs of low toxicity, SAH and procaine. Regarding the epigenetic profile, the global levels of DNA methylation were quantified as well as the levels of methylation in a satellite repetitive region of the treated cells. In addition, embryos were produced and their methylation levels were evaluated for two repetitive satellite regions. Regarding the gene expression profile, we determined the mRNA levels for the DNMT1, DNMT3A, DNMT3B, TET1, TET2, TET3 and OCT4 genes, which are related to the reprogramming of DNA methylation and pluripotency state. Cells treated with DNA demethylating substances showed lower levels of DNA methylation, both globally and in the satellite region. The embryonic clones produced from treated cells had lower levels of methylation compared to control embryos for the Satelite I region. Regarding the transcriptional profile, we observed that in cells treated with SAH + procaine, they presented a general reduction in the levels of DNMTs. On the other hand, for the TET3 enzyme, a higher level of transcripts was observed in comparison to the control. Our results showed that the use of demethylating agents in nucleating donor cells is capable of altering their epigenetic profile, in order to modify at the transcriptional level the production of enzymes related to methylation, which can lead the cell to a state of less differentiation. We have discussed, in this research study, the use of chromatin modulating agents as a perspective for use in cloning, medical research in cancer and other diseases.
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spelling Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNAEpigenetic and transcriptional profile of bovine skin fibroblasts cultured in vitro with DNA demethylating substancesTNCSEpigenéticaClonagemDNAMetilaçãoExpressão gênicaSAHProcaínaTETDNMTCNPQ::CIENCIAS BIOLOGICASCNPQ::CIENCIAS BIOLOGICAS::GENETICACNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMALSomatic cell nuclear transfer (SCNT) is a commercially available technique of assisted reproductive technology with broad applications. It is still a low-efficiency technique, possibly as a consequence of the epigenetic profile of the somatic genome of the donor cell, which carries characteristic marks of differentiated cells, which hampers correct reprogramming after nuclear transfer. This differentiated cell memory leads to changes in DNA methylation patterns as well as changes in the gene expression profile of important genes during embryonic development. In this study, we analyzed the DNA methylation and gene expression profile of bovine fibroblasts cultured in vitro with DNA toxicity drugs of low toxicity, SAH and procaine. Regarding the epigenetic profile, the global levels of DNA methylation were quantified as well as the levels of methylation in a satellite repetitive region of the treated cells. In addition, embryos were produced and their methylation levels were evaluated for two repetitive satellite regions. Regarding the gene expression profile, we determined the mRNA levels for the DNMT1, DNMT3A, DNMT3B, TET1, TET2, TET3 and OCT4 genes, which are related to the reprogramming of DNA methylation and pluripotency state. Cells treated with DNA demethylating substances showed lower levels of DNA methylation, both globally and in the satellite region. The embryonic clones produced from treated cells had lower levels of methylation compared to control embryos for the Satelite I region. Regarding the transcriptional profile, we observed that in cells treated with SAH + procaine, they presented a general reduction in the levels of DNMTs. On the other hand, for the TET3 enzyme, a higher level of transcripts was observed in comparison to the control. Our results showed that the use of demethylating agents in nucleating donor cells is capable of altering their epigenetic profile, in order to modify at the transcriptional level the production of enzymes related to methylation, which can lead the cell to a state of less differentiation. We have discussed, in this research study, the use of chromatin modulating agents as a perspective for use in cloning, medical research in cancer and other diseases.CAPES - Coordenação de Aperfeiçoamento de Pessoal de Nível SuperiorTese (Doutorado)A clonagem via transferência nuclear de células somáticas (TNCS) é uma biotécnica de reprodução assistida em uso comercial, com várias aplicações. Ainda assim é uma técnica de baixa eficiência, possivelmente em consequência do perfil epigenético do genoma somático da célula doadora de núcleo, o que dificulta a reprogramação correta após a transferência nuclear. A memória epigenética da célula diferenciada resulta em alterações na expressão de genes importantes durante o desenvolvimento embrionário. Nesse estudo, analisamos o perfil de metilação do DNA e de expressão gênica de fibroblastos bovinos cultivados in vitro com drogas desmetilantes de DNA, S-Adenosil-L-Homocisteína e procaína. Com relação ao perfil epigenético, foram quantificados os níveis globais de metilação do DNA, bem como os níveis de metilação em uma região de DNA repetitivo. Além disso, foram produzidos embriões e avaliados os níveis de metilação destes para duas regiões repetitivas satélites. Quanto ao perfil de expressão gênica, determinamos os níveis de mRNA para os genes DNMT1, DNMT3A, DNMT3B, TET1, TET2, TET3 e OCT4, os quais estão relacionados à reprogramação da metilação do DNA e estado de pluripotência. Células tratadas com as substâncias desmetilantes apresentaram níveis menores de metilação do DNA, tanto a nível global quanto para a região satélite I. Os embriões clones produzidos a partir de células tratadas apresentaram menores níveis de metilação em relação aos embriões controles para a região Satelite I. Quanto ao perfil transcricional, verificamos que células tratadas com SAH+procaína, apresentaram redução geral nos níveis de DNMTs. Por outro lado, para a enzima TET3 foi observado maior nível de transcritos em comparação ao controle. Nossos resultados mostraram que o uso desses agentes desmetilantes em células doadoras de núcleo foi capaz de alterar os níveis de metilação do DNA, além de alterar o perfil transcricional dos genes envolvidos na maquinaria epigenética. Portanto, sugere-se que o uso dessas substâncias possa contribuir para que o ovócito consiga reprogramar o núcleo doador de uma forma mais eficiente após a transferência nuclear. Assim, sugerimos que o uso de agentes moduladores de cromatina nos protocolos de cultivo celular para uso na clonagem por transferência nuclear possa contribuir para melhorar a eficiência da técnica.Universidade Federal de UberlândiaBrasilPrograma de Pós-graduação em Genética e BioquímicaFranco, Maurício Machaimhttp://lattes.cnpq.br/4979293133856180Vieira, Carlos UeiraLuiz, Denis PrudencioVaz, Emília RezendeGoulart, Vivian AlonsoSchumann, Naiara Araújo Borges2019-08-01T14:03:29Z2019-08-01T14:03:29Z2019-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisapplication/pdfSCHUMANN, Naiara Araújo Borges. Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA. 2019. 108 f. Tese (Doutorado em Genética e Bioquímica) - Universidade Federal de Uberlândia. 2019. DOI http://dx.doi.org/10.14393/ufu.te.2019.1258https://repositorio.ufu.br/handle/123456789/26409http://dx.doi.org/10.14393/ufu.te.2019.1258porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFUinstname:Universidade Federal de Uberlândia (UFU)instacron:UFU2019-08-02T06:06:49Zoai:repositorio.ufu.br:123456789/26409Repositório InstitucionalONGhttp://repositorio.ufu.br/oai/requestdiinf@dirbi.ufu.bropendoar:2019-08-02T06:06:49Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)false
dc.title.none.fl_str_mv Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
Epigenetic and transcriptional profile of bovine skin fibroblasts cultured in vitro with DNA demethylating substances
title Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
spellingShingle Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
Schumann, Naiara Araújo Borges
TNCS
Epigenética
Clonagem
DNA
Metilação
Expressão gênica
SAH
Procaína
TET
DNMT
CNPQ::CIENCIAS BIOLOGICAS
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL
title_short Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
title_full Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
title_fullStr Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
title_full_unstemmed Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
title_sort Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA
author Schumann, Naiara Araújo Borges
author_facet Schumann, Naiara Araújo Borges
author_role author
dc.contributor.none.fl_str_mv Franco, Maurício Machaim
http://lattes.cnpq.br/4979293133856180
Vieira, Carlos Ueira
Luiz, Denis Prudencio
Vaz, Emília Rezende
Goulart, Vivian Alonso
dc.contributor.author.fl_str_mv Schumann, Naiara Araújo Borges
dc.subject.por.fl_str_mv TNCS
Epigenética
Clonagem
DNA
Metilação
Expressão gênica
SAH
Procaína
TET
DNMT
CNPQ::CIENCIAS BIOLOGICAS
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL
topic TNCS
Epigenética
Clonagem
DNA
Metilação
Expressão gênica
SAH
Procaína
TET
DNMT
CNPQ::CIENCIAS BIOLOGICAS
CNPQ::CIENCIAS BIOLOGICAS::GENETICA
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL
description Somatic cell nuclear transfer (SCNT) is a commercially available technique of assisted reproductive technology with broad applications. It is still a low-efficiency technique, possibly as a consequence of the epigenetic profile of the somatic genome of the donor cell, which carries characteristic marks of differentiated cells, which hampers correct reprogramming after nuclear transfer. This differentiated cell memory leads to changes in DNA methylation patterns as well as changes in the gene expression profile of important genes during embryonic development. In this study, we analyzed the DNA methylation and gene expression profile of bovine fibroblasts cultured in vitro with DNA toxicity drugs of low toxicity, SAH and procaine. Regarding the epigenetic profile, the global levels of DNA methylation were quantified as well as the levels of methylation in a satellite repetitive region of the treated cells. In addition, embryos were produced and their methylation levels were evaluated for two repetitive satellite regions. Regarding the gene expression profile, we determined the mRNA levels for the DNMT1, DNMT3A, DNMT3B, TET1, TET2, TET3 and OCT4 genes, which are related to the reprogramming of DNA methylation and pluripotency state. Cells treated with DNA demethylating substances showed lower levels of DNA methylation, both globally and in the satellite region. The embryonic clones produced from treated cells had lower levels of methylation compared to control embryos for the Satelite I region. Regarding the transcriptional profile, we observed that in cells treated with SAH + procaine, they presented a general reduction in the levels of DNMTs. On the other hand, for the TET3 enzyme, a higher level of transcripts was observed in comparison to the control. Our results showed that the use of demethylating agents in nucleating donor cells is capable of altering their epigenetic profile, in order to modify at the transcriptional level the production of enzymes related to methylation, which can lead the cell to a state of less differentiation. We have discussed, in this research study, the use of chromatin modulating agents as a perspective for use in cloning, medical research in cancer and other diseases.
publishDate 2019
dc.date.none.fl_str_mv 2019-08-01T14:03:29Z
2019-08-01T14:03:29Z
2019-04-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv SCHUMANN, Naiara Araújo Borges. Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA. 2019. 108 f. Tese (Doutorado em Genética e Bioquímica) - Universidade Federal de Uberlândia. 2019. DOI http://dx.doi.org/10.14393/ufu.te.2019.1258
https://repositorio.ufu.br/handle/123456789/26409
http://dx.doi.org/10.14393/ufu.te.2019.1258
identifier_str_mv SCHUMANN, Naiara Araújo Borges. Perfil epigenético e transcricional de fibroblastos isolados de pele bovina cultivados in vitro com substâncias desmetilantes de DNA. 2019. 108 f. Tese (Doutorado em Genética e Bioquímica) - Universidade Federal de Uberlândia. 2019. DOI http://dx.doi.org/10.14393/ufu.te.2019.1258
url https://repositorio.ufu.br/handle/123456789/26409
http://dx.doi.org/10.14393/ufu.te.2019.1258
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Genética e Bioquímica
publisher.none.fl_str_mv Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Genética e Bioquímica
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFU
instname:Universidade Federal de Uberlândia (UFU)
instacron:UFU
instname_str Universidade Federal de Uberlândia (UFU)
instacron_str UFU
institution UFU
reponame_str Repositório Institucional da UFU
collection Repositório Institucional da UFU
repository.name.fl_str_mv Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)
repository.mail.fl_str_mv diinf@dirbi.ufu.br
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