Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa

Detalhes bibliográficos
Autor(a) principal: Souza, Jessica Brito de
Data de Publicação: 2017
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Repositório Institucional da UFU
Texto Completo: https://repositorio.ufu.br/handle/123456789/22956
http://dx.doi.org/10.14393/ufu.di.2018.808
Resumo: Xylella fastidiosa is a gram-negative and non-flagellate bacterium that colonizes the xylem of various cultivated and wild plants worldwide. In the last decades, it has been well studied due to the importance of this phytopathogen as the causing agent of two major diseases, Citrus Variegated Chlorosis (CVC) in Brazil and Argentina, and Pierce Disease (PD) in the United States. Some strains of X.fastidiosa have their genomes completely or partially elucidated, such as 9a5c, isolated from orange in the state of São Paulo, and the strain Fb7, isolated from orange in the region of Corrientes in Argentina. Based on the genomic analysis between strains 9a5c and Fb7, and on the importance of a lipase/esterase in the pathogenicity of X.fastidiosa, the objective of this work was to analyze and identify the factors associated with the pathogenicity and virulence of X.fastidiosa strain 9a5c and Fb7. To visualize the presence of LesA in the total and secreted protein samples of strains 9a5c and Fb7, esterase and lipase tests were performed. Lipase activity was analyzed by culturing the bacteria in culture medium supplemented with 1% tributyrin. This test demonstrated activity under the short chain triacylglycerols present in the medium and can be visualized by the increased halo formation in the Fb7 strain. The esterase activity, determined by the substrate 4-methylumbelliferylbutyrate (4-MUB), showed significant and clearly expressed values. Hence, the Fb7 strain showed considerably higher activity when compared to 9a5c. In search for virulence factors, a liquid chromatography coupled to mass spectrometry (LC-MS / MS) of the total proteins of the X.fastidiosa cultures of both strains was performed. In this analysis, it was identified 119 differentially expressed proteins. Among them, some proteins with functions associated with bacterial virulence were overexpressed in Fb7 strain, compared to 9a5c strain. The RT-qPCR analysis allowed to validate the expression of some of these proteins. The results showed that LesA and other proteins with higher levels of expression in Fb7 play an important pathogenicity role in this strain. Thus, they are factors that may explain the greater virulence of Fb7 strain when compared to strain 9a5c.
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spelling Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosaComparative proteomics of strains 9a5c and fb7 from xylella fastidiosaFitopatógenoVirulênciaLipasePhytopathogenVirulenceGenéticaFitopatologiaVírus de plantasCNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOSXylella fastidiosa is a gram-negative and non-flagellate bacterium that colonizes the xylem of various cultivated and wild plants worldwide. In the last decades, it has been well studied due to the importance of this phytopathogen as the causing agent of two major diseases, Citrus Variegated Chlorosis (CVC) in Brazil and Argentina, and Pierce Disease (PD) in the United States. Some strains of X.fastidiosa have their genomes completely or partially elucidated, such as 9a5c, isolated from orange in the state of São Paulo, and the strain Fb7, isolated from orange in the region of Corrientes in Argentina. Based on the genomic analysis between strains 9a5c and Fb7, and on the importance of a lipase/esterase in the pathogenicity of X.fastidiosa, the objective of this work was to analyze and identify the factors associated with the pathogenicity and virulence of X.fastidiosa strain 9a5c and Fb7. To visualize the presence of LesA in the total and secreted protein samples of strains 9a5c and Fb7, esterase and lipase tests were performed. Lipase activity was analyzed by culturing the bacteria in culture medium supplemented with 1% tributyrin. This test demonstrated activity under the short chain triacylglycerols present in the medium and can be visualized by the increased halo formation in the Fb7 strain. The esterase activity, determined by the substrate 4-methylumbelliferylbutyrate (4-MUB), showed significant and clearly expressed values. Hence, the Fb7 strain showed considerably higher activity when compared to 9a5c. In search for virulence factors, a liquid chromatography coupled to mass spectrometry (LC-MS / MS) of the total proteins of the X.fastidiosa cultures of both strains was performed. In this analysis, it was identified 119 differentially expressed proteins. Among them, some proteins with functions associated with bacterial virulence were overexpressed in Fb7 strain, compared to 9a5c strain. The RT-qPCR analysis allowed to validate the expression of some of these proteins. The results showed that LesA and other proteins with higher levels of expression in Fb7 play an important pathogenicity role in this strain. Thus, they are factors that may explain the greater virulence of Fb7 strain when compared to strain 9a5c.FAPEMIG - Fundação de Amparo a Pesquisa do Estado de Minas GeraisDissertação (Mestrado)Xylella fastidiosa é uma bactéria Gram-negativa e não flagelada responsável por colonizar o xilema de várias plantas cultivadas e selvagens encontradas em todo o mundo. Nas últimas décadas, tem sido bem estudada devido à importância deste fitopatógeno como agente causador de duas principais doenças, a Clorose Variegada dos Citros (CVC), no Brasil e na Argentina, e a Doença de Pierce (PD) nos Estados Unidos. Algumas cepas de X.fastidiosa têm seus genomas completamente ou parcialmente elucidados, como: 9a5c, isolado de laranja no estado de São Paulo e a cepa Fb7, isolada da laranja na região de Corrientes na Argentina. Baseando-se na análise genômica entre 9a5c e Fb7, e também na importância de uma lipase/esterase na patogenicidade de X.fastidiosa, o objetivo deste trabalho foi analisar e identificar os fatores associados à patogenicidade e virulência de X.fastidiosa 9a5c e Fb7. A fim de visualizar a presença de LesA nas amostras de proteínas totais e secretadas das cepas 9a5c e Fb7, testes esterásico e lipásico foram realizados. A atividade lipásica foi analisada cultivando a bactéria em meio de cultura suplementado com 1% de tributirina. Este teste demonstrou atividade sob os triacilgliceróis de cadeia curta presentes no meio e pode ser visualizado pela maior formação do halo na cepa Fb7. A atividade de esterase, determinada pelo substrato 4-metilumbelliferilbutirato (4-MUB), apresentou valores significativos e claramente expressos. Assim, a estirpe Fb7 apresentou atividade consideravelmente maior quando comparada com 9a5c. Em busca de outros fatores de virulência, foi realizado uma cromatografia líquida acoplada à espectrometria de massa (LC-MS/MS) das proteínas totais das culturas de X.fastidiosa de ambas as cepas. Nesta análise, foi possível identificar 119 proteínas diferencialmente expressas. Dentre elas, algumas proteínas com funções associadas a virulência da bactéria foram superexpressas na cepa Fb7, comparado a cepa 9a5c. A análise de RT-qPCR permitiu validar a expressão de algumas dessas proteínas. Os resultados demonstraram que a LesA e outras proteínas com níveis de expressão superior em Fb7, desempenham um importante papel de patogenicidade nesta cepa. Dessa forma, são fatores que podem explicar a maior virulência da cepa Fb7 quando comparado a cepa 9a5c.Universidade Federal de UberlândiaBrasilPrograma de Pós-graduação em Genética e BioquímicaNascimento, Rafaelhttp://lattes.cnpq.br/5425179966802543Souza, Hebréia Oliveira AlmeidaZaini, Paulo AdrianoSouza, Jessica Brito de2018-11-23T13:21:25Z2018-11-23T13:21:25Z2017-07-31info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisapplication/pdfBRITO-DE-SOUZA, Jessica. Proteômica comparativa das cepas 9a5c e Fb7 de Xylella fastidiosa - Uberlândia.2017. 80 f. Dissertação (Mestrado em Genética e Bioquímica) - Universidade Federal de Uberlândia, Uberlândia, 2017. DOI http://dx.doi.org/10.14393/ufu.di.2018.808.https://repositorio.ufu.br/handle/123456789/22956http://dx.doi.org/10.14393/ufu.di.2018.808porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UFUinstname:Universidade Federal de Uberlândia (UFU)instacron:UFU2021-04-05T20:05:29Zoai:repositorio.ufu.br:123456789/22956Repositório InstitucionalONGhttp://repositorio.ufu.br/oai/requestdiinf@dirbi.ufu.bropendoar:2021-04-05T20:05:29Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)false
dc.title.none.fl_str_mv Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
Comparative proteomics of strains 9a5c and fb7 from xylella fastidiosa
title Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
spellingShingle Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
Souza, Jessica Brito de
Fitopatógeno
Virulência
Lipase
Phytopathogen
Virulence
Genética
Fitopatologia
Vírus de plantas
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
title_short Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
title_full Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
title_fullStr Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
title_full_unstemmed Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
title_sort Proteômica comparativa das cepas 9a5c e fb7 de xylella fastidiosa
author Souza, Jessica Brito de
author_facet Souza, Jessica Brito de
author_role author
dc.contributor.none.fl_str_mv Nascimento, Rafael
http://lattes.cnpq.br/5425179966802543
Souza, Hebréia Oliveira Almeida
Zaini, Paulo Adriano
dc.contributor.author.fl_str_mv Souza, Jessica Brito de
dc.subject.por.fl_str_mv Fitopatógeno
Virulência
Lipase
Phytopathogen
Virulence
Genética
Fitopatologia
Vírus de plantas
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
topic Fitopatógeno
Virulência
Lipase
Phytopathogen
Virulence
Genética
Fitopatologia
Vírus de plantas
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA MOLECULAR E DE MICROORGANISMOS
description Xylella fastidiosa is a gram-negative and non-flagellate bacterium that colonizes the xylem of various cultivated and wild plants worldwide. In the last decades, it has been well studied due to the importance of this phytopathogen as the causing agent of two major diseases, Citrus Variegated Chlorosis (CVC) in Brazil and Argentina, and Pierce Disease (PD) in the United States. Some strains of X.fastidiosa have their genomes completely or partially elucidated, such as 9a5c, isolated from orange in the state of São Paulo, and the strain Fb7, isolated from orange in the region of Corrientes in Argentina. Based on the genomic analysis between strains 9a5c and Fb7, and on the importance of a lipase/esterase in the pathogenicity of X.fastidiosa, the objective of this work was to analyze and identify the factors associated with the pathogenicity and virulence of X.fastidiosa strain 9a5c and Fb7. To visualize the presence of LesA in the total and secreted protein samples of strains 9a5c and Fb7, esterase and lipase tests were performed. Lipase activity was analyzed by culturing the bacteria in culture medium supplemented with 1% tributyrin. This test demonstrated activity under the short chain triacylglycerols present in the medium and can be visualized by the increased halo formation in the Fb7 strain. The esterase activity, determined by the substrate 4-methylumbelliferylbutyrate (4-MUB), showed significant and clearly expressed values. Hence, the Fb7 strain showed considerably higher activity when compared to 9a5c. In search for virulence factors, a liquid chromatography coupled to mass spectrometry (LC-MS / MS) of the total proteins of the X.fastidiosa cultures of both strains was performed. In this analysis, it was identified 119 differentially expressed proteins. Among them, some proteins with functions associated with bacterial virulence were overexpressed in Fb7 strain, compared to 9a5c strain. The RT-qPCR analysis allowed to validate the expression of some of these proteins. The results showed that LesA and other proteins with higher levels of expression in Fb7 play an important pathogenicity role in this strain. Thus, they are factors that may explain the greater virulence of Fb7 strain when compared to strain 9a5c.
publishDate 2017
dc.date.none.fl_str_mv 2017-07-31
2018-11-23T13:21:25Z
2018-11-23T13:21:25Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
format masterThesis
status_str publishedVersion
dc.identifier.uri.fl_str_mv BRITO-DE-SOUZA, Jessica. Proteômica comparativa das cepas 9a5c e Fb7 de Xylella fastidiosa - Uberlândia.2017. 80 f. Dissertação (Mestrado em Genética e Bioquímica) - Universidade Federal de Uberlândia, Uberlândia, 2017. DOI http://dx.doi.org/10.14393/ufu.di.2018.808.
https://repositorio.ufu.br/handle/123456789/22956
http://dx.doi.org/10.14393/ufu.di.2018.808
identifier_str_mv BRITO-DE-SOUZA, Jessica. Proteômica comparativa das cepas 9a5c e Fb7 de Xylella fastidiosa - Uberlândia.2017. 80 f. Dissertação (Mestrado em Genética e Bioquímica) - Universidade Federal de Uberlândia, Uberlândia, 2017. DOI http://dx.doi.org/10.14393/ufu.di.2018.808.
url https://repositorio.ufu.br/handle/123456789/22956
http://dx.doi.org/10.14393/ufu.di.2018.808
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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dc.publisher.none.fl_str_mv Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Genética e Bioquímica
publisher.none.fl_str_mv Universidade Federal de Uberlândia
Brasil
Programa de Pós-graduação em Genética e Bioquímica
dc.source.none.fl_str_mv reponame:Repositório Institucional da UFU
instname:Universidade Federal de Uberlândia (UFU)
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instname_str Universidade Federal de Uberlândia (UFU)
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reponame_str Repositório Institucional da UFU
collection Repositório Institucional da UFU
repository.name.fl_str_mv Repositório Institucional da UFU - Universidade Federal de Uberlândia (UFU)
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