Survival analysis: a tool in the study of post-harvest diseases in peaches

Detalhes bibliográficos
Autor(a) principal: Nesi,Cristiano Nunes
Data de Publicação: 2015
Outros Autores: Shimakura,Silvia Emiko, Ribeiro Junior,Paulo Justiniano, Mio,Louise Larissa May De
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Ceres
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0034-737X2015000100052
Resumo: Survival analysis is applied when the time until the occurrence of an event is of interest. Such data are routinely collected in plant diseases, although applications of the method are uncommon. The objective of this study was to use two studies on post-harvest diseases of peaches, considering two harvests together and the existence of random effect shared by fruits of a same tree, in order to describe the main techniques in survival analysis. The nonparametric Kaplan-Meier method, the log-rank test and the semi-parametric Cox's proportional hazards model were used to estimate the effect of cultivars and the number of days after full bloom on the survival to the brown rot symptom and the instantaneous risk of expressing it in two consecutive harvests. The joint analysis with baseline effect, varying between harvests, and the confirmation of the tree effect as a grouping factor with random effect were appropriate to interpret the phenomenon (disease) evaluated and can be important tools to replace or complement the conventional analysis, respecting the nature of the variable and the phenomenon.
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spelling Survival analysis: a tool in the study of post-harvest diseases in peachestime-occurrenceKaplan-MeierCox regressionpeachSurvival analysis is applied when the time until the occurrence of an event is of interest. Such data are routinely collected in plant diseases, although applications of the method are uncommon. The objective of this study was to use two studies on post-harvest diseases of peaches, considering two harvests together and the existence of random effect shared by fruits of a same tree, in order to describe the main techniques in survival analysis. The nonparametric Kaplan-Meier method, the log-rank test and the semi-parametric Cox's proportional hazards model were used to estimate the effect of cultivars and the number of days after full bloom on the survival to the brown rot symptom and the instantaneous risk of expressing it in two consecutive harvests. The joint analysis with baseline effect, varying between harvests, and the confirmation of the tree effect as a grouping factor with random effect were appropriate to interpret the phenomenon (disease) evaluated and can be important tools to replace or complement the conventional analysis, respecting the nature of the variable and the phenomenon.Universidade Federal de Viçosa2015-02-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0034-737X2015000100052Revista Ceres v.62 n.1 2015reponame:Revista Ceresinstname:Universidade Federal de Viçosa (UFV)instacron:UFV10.1590/0034-737X201562010007info:eu-repo/semantics/openAccessNesi,Cristiano NunesShimakura,Silvia EmikoRibeiro Junior,Paulo JustinianoMio,Louise Larissa May Deeng2015-04-23T00:00:00ZRevista
dc.title.none.fl_str_mv Survival analysis: a tool in the study of post-harvest diseases in peaches
title Survival analysis: a tool in the study of post-harvest diseases in peaches
spellingShingle Survival analysis: a tool in the study of post-harvest diseases in peaches
Nesi,Cristiano Nunes
time-occurrence
Kaplan-Meier
Cox regression
peach
title_short Survival analysis: a tool in the study of post-harvest diseases in peaches
title_full Survival analysis: a tool in the study of post-harvest diseases in peaches
title_fullStr Survival analysis: a tool in the study of post-harvest diseases in peaches
title_full_unstemmed Survival analysis: a tool in the study of post-harvest diseases in peaches
title_sort Survival analysis: a tool in the study of post-harvest diseases in peaches
author Nesi,Cristiano Nunes
author_facet Nesi,Cristiano Nunes
Shimakura,Silvia Emiko
Ribeiro Junior,Paulo Justiniano
Mio,Louise Larissa May De
author_role author
author2 Shimakura,Silvia Emiko
Ribeiro Junior,Paulo Justiniano
Mio,Louise Larissa May De
author2_role author
author
author
dc.contributor.author.fl_str_mv Nesi,Cristiano Nunes
Shimakura,Silvia Emiko
Ribeiro Junior,Paulo Justiniano
Mio,Louise Larissa May De
dc.subject.por.fl_str_mv time-occurrence
Kaplan-Meier
Cox regression
peach
topic time-occurrence
Kaplan-Meier
Cox regression
peach
dc.description.none.fl_txt_mv Survival analysis is applied when the time until the occurrence of an event is of interest. Such data are routinely collected in plant diseases, although applications of the method are uncommon. The objective of this study was to use two studies on post-harvest diseases of peaches, considering two harvests together and the existence of random effect shared by fruits of a same tree, in order to describe the main techniques in survival analysis. The nonparametric Kaplan-Meier method, the log-rank test and the semi-parametric Cox's proportional hazards model were used to estimate the effect of cultivars and the number of days after full bloom on the survival to the brown rot symptom and the instantaneous risk of expressing it in two consecutive harvests. The joint analysis with baseline effect, varying between harvests, and the confirmation of the tree effect as a grouping factor with random effect were appropriate to interpret the phenomenon (disease) evaluated and can be important tools to replace or complement the conventional analysis, respecting the nature of the variable and the phenomenon.
description Survival analysis is applied when the time until the occurrence of an event is of interest. Such data are routinely collected in plant diseases, although applications of the method are uncommon. The objective of this study was to use two studies on post-harvest diseases of peaches, considering two harvests together and the existence of random effect shared by fruits of a same tree, in order to describe the main techniques in survival analysis. The nonparametric Kaplan-Meier method, the log-rank test and the semi-parametric Cox's proportional hazards model were used to estimate the effect of cultivars and the number of days after full bloom on the survival to the brown rot symptom and the instantaneous risk of expressing it in two consecutive harvests. The joint analysis with baseline effect, varying between harvests, and the confirmation of the tree effect as a grouping factor with random effect were appropriate to interpret the phenomenon (disease) evaluated and can be important tools to replace or complement the conventional analysis, respecting the nature of the variable and the phenomenon.
publishDate 2015
dc.date.none.fl_str_mv 2015-02-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0034-737X2015000100052
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0034-737X2015000100052
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0034-737X201562010007
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Universidade Federal de Viçosa
publisher.none.fl_str_mv Universidade Federal de Viçosa
dc.source.none.fl_str_mv Revista Ceres v.62 n.1 2015
reponame:Revista Ceres
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str Revista Ceres
collection Revista Ceres
repository.name.fl_str_mv
repository.mail.fl_str_mv
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