Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | The Journal of Engineering and Exact Sciences |
Texto Completo: | https://periodicos.ufv.br/jcec/article/view/2516 |
Resumo: | Quantitative structure-activity relationship and molecular docking studies of 35 compounds of Biscoumarins and Biscoumarins thiourea derivatives as alfa-glucosidase inhibitors was performed. Density Functional Theory (DFT) method was employed for complete geometry optimization of the alfa-glucosidase inhibitors. Genetic Function Algorithm (GFA) of the material studio was utilized to develop four models. Model 1 was found to be the best model with R2 = 0.914362, R2 adj = 0.892953, Q2cv = 0.858197 and R2 pred = 0.614745. The proposed model is robustness and predicted with good internal and external validation. The descriptors should be considered when improving the inhibitory activities of biscoumarin derivatives against alfa-glucosidase. The docking results showed that ligands having Ortho substituted phenyl ring have good interactions with active site residues and good inhibitory activities as compared to ligands having either Para or Meta substituted phenyl ring except ligand 16 which has the highest docking scores of -12.5 kcal/mol but undergoes para substitution on the phenyl ring and formed hydrogen bond, hydrophobic and electrostatic interactions with the active residues of the enzyme. The QSAR model and molecular docking results agree with each other and give way to the designing of new inhibitors with better activity against alfa-glucosidase. |
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Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors⍺-glucosidaseQSARMolecular dockingBiscoumarinQuantitative structure-activity relationship and molecular docking studies of 35 compounds of Biscoumarins and Biscoumarins thiourea derivatives as alfa-glucosidase inhibitors was performed. Density Functional Theory (DFT) method was employed for complete geometry optimization of the alfa-glucosidase inhibitors. Genetic Function Algorithm (GFA) of the material studio was utilized to develop four models. Model 1 was found to be the best model with R2 = 0.914362, R2 adj = 0.892953, Q2cv = 0.858197 and R2 pred = 0.614745. The proposed model is robustness and predicted with good internal and external validation. The descriptors should be considered when improving the inhibitory activities of biscoumarin derivatives against alfa-glucosidase. The docking results showed that ligands having Ortho substituted phenyl ring have good interactions with active site residues and good inhibitory activities as compared to ligands having either Para or Meta substituted phenyl ring except ligand 16 which has the highest docking scores of -12.5 kcal/mol but undergoes para substitution on the phenyl ring and formed hydrogen bond, hydrophobic and electrostatic interactions with the active residues of the enzyme. The QSAR model and molecular docking results agree with each other and give way to the designing of new inhibitors with better activity against alfa-glucosidase.Universidade Federal de Viçosa - UFV2018-07-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.ufv.br/jcec/article/view/251610.18540/jcecvl4iss2pp0276-0285The Journal of Engineering and Exact Sciences; Vol. 4 No. 2 (2018); 0276-0285The Journal of Engineering and Exact Sciences; Vol. 4 Núm. 2 (2018); 0276-0285The Journal of Engineering and Exact Sciences; v. 4 n. 2 (2018); 0276-02852527-1075reponame:The Journal of Engineering and Exact Sciencesinstname:Universidade Federal de Viçosa (UFV)instacron:UFVenghttps://periodicos.ufv.br/jcec/article/view/2516/1060Copyright (c) 2018 The Journal of Engineering and Exact Scienceshttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessIbrahim, Muhammad TukurUzairu, AdamuShallangwa, Gideon AdamuIbrahim, Abdulkadir2021-11-03T12:21:37Zoai:ojs.periodicos.ufv.br:article/2516Revistahttp://www.seer.ufv.br/seer/rbeq2/index.php/req2/oai2527-10752527-1075opendoar:2021-11-03T12:21:37The Journal of Engineering and Exact Sciences - Universidade Federal de Viçosa (UFV)false |
dc.title.none.fl_str_mv |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
title |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
spellingShingle |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors Ibrahim, Muhammad Tukur ⍺-glucosidase QSAR Molecular docking Biscoumarin |
title_short |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
title_full |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
title_fullStr |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
title_full_unstemmed |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
title_sort |
Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors |
author |
Ibrahim, Muhammad Tukur |
author_facet |
Ibrahim, Muhammad Tukur Uzairu, Adamu Shallangwa, Gideon Adamu Ibrahim, Abdulkadir |
author_role |
author |
author2 |
Uzairu, Adamu Shallangwa, Gideon Adamu Ibrahim, Abdulkadir |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Ibrahim, Muhammad Tukur Uzairu, Adamu Shallangwa, Gideon Adamu Ibrahim, Abdulkadir |
dc.subject.por.fl_str_mv |
⍺-glucosidase QSAR Molecular docking Biscoumarin |
topic |
⍺-glucosidase QSAR Molecular docking Biscoumarin |
description |
Quantitative structure-activity relationship and molecular docking studies of 35 compounds of Biscoumarins and Biscoumarins thiourea derivatives as alfa-glucosidase inhibitors was performed. Density Functional Theory (DFT) method was employed for complete geometry optimization of the alfa-glucosidase inhibitors. Genetic Function Algorithm (GFA) of the material studio was utilized to develop four models. Model 1 was found to be the best model with R2 = 0.914362, R2 adj = 0.892953, Q2cv = 0.858197 and R2 pred = 0.614745. The proposed model is robustness and predicted with good internal and external validation. The descriptors should be considered when improving the inhibitory activities of biscoumarin derivatives against alfa-glucosidase. The docking results showed that ligands having Ortho substituted phenyl ring have good interactions with active site residues and good inhibitory activities as compared to ligands having either Para or Meta substituted phenyl ring except ligand 16 which has the highest docking scores of -12.5 kcal/mol but undergoes para substitution on the phenyl ring and formed hydrogen bond, hydrophobic and electrostatic interactions with the active residues of the enzyme. The QSAR model and molecular docking results agree with each other and give way to the designing of new inhibitors with better activity against alfa-glucosidase. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-07-04 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://periodicos.ufv.br/jcec/article/view/2516 10.18540/jcecvl4iss2pp0276-0285 |
url |
https://periodicos.ufv.br/jcec/article/view/2516 |
identifier_str_mv |
10.18540/jcecvl4iss2pp0276-0285 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://periodicos.ufv.br/jcec/article/view/2516/1060 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2018 The Journal of Engineering and Exact Sciences https://creativecommons.org/licenses/by/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2018 The Journal of Engineering and Exact Sciences https://creativecommons.org/licenses/by/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade Federal de Viçosa - UFV |
publisher.none.fl_str_mv |
Universidade Federal de Viçosa - UFV |
dc.source.none.fl_str_mv |
The Journal of Engineering and Exact Sciences; Vol. 4 No. 2 (2018); 0276-0285 The Journal of Engineering and Exact Sciences; Vol. 4 Núm. 2 (2018); 0276-0285 The Journal of Engineering and Exact Sciences; v. 4 n. 2 (2018); 0276-0285 2527-1075 reponame:The Journal of Engineering and Exact Sciences instname:Universidade Federal de Viçosa (UFV) instacron:UFV |
instname_str |
Universidade Federal de Viçosa (UFV) |
instacron_str |
UFV |
institution |
UFV |
reponame_str |
The Journal of Engineering and Exact Sciences |
collection |
The Journal of Engineering and Exact Sciences |
repository.name.fl_str_mv |
The Journal of Engineering and Exact Sciences - Universidade Federal de Viçosa (UFV) |
repository.mail.fl_str_mv |
|
_version_ |
1808845244329885696 |