Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors

Detalhes bibliográficos
Autor(a) principal: Ibrahim, Muhammad Tukur
Data de Publicação: 2018
Outros Autores: Uzairu, Adamu, Shallangwa, Gideon Adamu, Ibrahim, Abdulkadir
Tipo de documento: Artigo
Idioma: eng
Título da fonte: The Journal of Engineering and Exact Sciences
Texto Completo: https://periodicos.ufv.br/jcec/article/view/2516
Resumo: Quantitative structure-activity relationship and molecular docking studies of 35 compounds of Biscoumarins and Biscoumarins thiourea derivatives as alfa-glucosidase inhibitors was performed. Density Functional Theory (DFT) method was employed for complete geometry optimization of the alfa-glucosidase inhibitors. Genetic Function Algorithm (GFA) of the material studio was utilized to develop four models. Model 1 was found to be the best model with R2 = 0.914362, R2 adj = 0.892953, Q2cv = 0.858197 and R2 pred = 0.614745. The proposed model is robustness and predicted with good internal and external validation. The descriptors should be considered when improving the inhibitory activities of biscoumarin derivatives against alfa-glucosidase. The docking results showed that ligands having Ortho substituted phenyl ring have good interactions with active site residues and good inhibitory activities as compared to ligands having either Para or Meta substituted phenyl ring except ligand 16 which has the highest docking scores of -12.5 kcal/mol but undergoes para substitution on the phenyl ring and formed hydrogen bond, hydrophobic and electrostatic interactions with the active residues of the enzyme. The QSAR model and molecular docking results agree with each other and give way to the designing of new inhibitors with better activity against alfa-glucosidase.
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spelling Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors⍺-glucosidaseQSARMolecular dockingBiscoumarinQuantitative structure-activity relationship and molecular docking studies of 35 compounds of Biscoumarins and Biscoumarins thiourea derivatives as alfa-glucosidase inhibitors was performed. Density Functional Theory (DFT) method was employed for complete geometry optimization of the alfa-glucosidase inhibitors. Genetic Function Algorithm (GFA) of the material studio was utilized to develop four models. Model 1 was found to be the best model with R2 = 0.914362, R2 adj = 0.892953, Q2cv = 0.858197 and R2 pred = 0.614745. The proposed model is robustness and predicted with good internal and external validation. The descriptors should be considered when improving the inhibitory activities of biscoumarin derivatives against alfa-glucosidase. The docking results showed that ligands having Ortho substituted phenyl ring have good interactions with active site residues and good inhibitory activities as compared to ligands having either Para or Meta substituted phenyl ring except ligand 16 which has the highest docking scores of -12.5 kcal/mol but undergoes para substitution on the phenyl ring and formed hydrogen bond, hydrophobic and electrostatic interactions with the active residues of the enzyme. The QSAR model and molecular docking results agree with each other and give way to the designing of new inhibitors with better activity against alfa-glucosidase.Universidade Federal de Viçosa - UFV2018-07-04info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.ufv.br/jcec/article/view/251610.18540/jcecvl4iss2pp0276-0285The Journal of Engineering and Exact Sciences; Vol. 4 No. 2 (2018); 0276-0285The Journal of Engineering and Exact Sciences; Vol. 4 Núm. 2 (2018); 0276-0285The Journal of Engineering and Exact Sciences; v. 4 n. 2 (2018); 0276-02852527-1075reponame:The Journal of Engineering and Exact Sciencesinstname:Universidade Federal de Viçosa (UFV)instacron:UFVenghttps://periodicos.ufv.br/jcec/article/view/2516/1060Copyright (c) 2018 The Journal of Engineering and Exact Scienceshttps://creativecommons.org/licenses/by/4.0info:eu-repo/semantics/openAccessIbrahim, Muhammad TukurUzairu, AdamuShallangwa, Gideon AdamuIbrahim, Abdulkadir2021-11-03T12:21:37Zoai:ojs.periodicos.ufv.br:article/2516Revistahttp://www.seer.ufv.br/seer/rbeq2/index.php/req2/oai2527-10752527-1075opendoar:2021-11-03T12:21:37The Journal of Engineering and Exact Sciences - Universidade Federal de Viçosa (UFV)false
dc.title.none.fl_str_mv Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
title Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
spellingShingle Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
Ibrahim, Muhammad Tukur
⍺-glucosidase
QSAR
Molecular docking
Biscoumarin
title_short Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
title_full Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
title_fullStr Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
title_full_unstemmed Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
title_sort Computational studies of some biscoumarin and biscoumarin thiourea derivatives as alfa-glucosidase inhibitors
author Ibrahim, Muhammad Tukur
author_facet Ibrahim, Muhammad Tukur
Uzairu, Adamu
Shallangwa, Gideon Adamu
Ibrahim, Abdulkadir
author_role author
author2 Uzairu, Adamu
Shallangwa, Gideon Adamu
Ibrahim, Abdulkadir
author2_role author
author
author
dc.contributor.author.fl_str_mv Ibrahim, Muhammad Tukur
Uzairu, Adamu
Shallangwa, Gideon Adamu
Ibrahim, Abdulkadir
dc.subject.por.fl_str_mv ⍺-glucosidase
QSAR
Molecular docking
Biscoumarin
topic ⍺-glucosidase
QSAR
Molecular docking
Biscoumarin
description Quantitative structure-activity relationship and molecular docking studies of 35 compounds of Biscoumarins and Biscoumarins thiourea derivatives as alfa-glucosidase inhibitors was performed. Density Functional Theory (DFT) method was employed for complete geometry optimization of the alfa-glucosidase inhibitors. Genetic Function Algorithm (GFA) of the material studio was utilized to develop four models. Model 1 was found to be the best model with R2 = 0.914362, R2 adj = 0.892953, Q2cv = 0.858197 and R2 pred = 0.614745. The proposed model is robustness and predicted with good internal and external validation. The descriptors should be considered when improving the inhibitory activities of biscoumarin derivatives against alfa-glucosidase. The docking results showed that ligands having Ortho substituted phenyl ring have good interactions with active site residues and good inhibitory activities as compared to ligands having either Para or Meta substituted phenyl ring except ligand 16 which has the highest docking scores of -12.5 kcal/mol but undergoes para substitution on the phenyl ring and formed hydrogen bond, hydrophobic and electrostatic interactions with the active residues of the enzyme. The QSAR model and molecular docking results agree with each other and give way to the designing of new inhibitors with better activity against alfa-glucosidase.
publishDate 2018
dc.date.none.fl_str_mv 2018-07-04
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://periodicos.ufv.br/jcec/article/view/2516
10.18540/jcecvl4iss2pp0276-0285
url https://periodicos.ufv.br/jcec/article/view/2516
identifier_str_mv 10.18540/jcecvl4iss2pp0276-0285
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://periodicos.ufv.br/jcec/article/view/2516/1060
dc.rights.driver.fl_str_mv Copyright (c) 2018 The Journal of Engineering and Exact Sciences
https://creativecommons.org/licenses/by/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2018 The Journal of Engineering and Exact Sciences
https://creativecommons.org/licenses/by/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal de Viçosa - UFV
publisher.none.fl_str_mv Universidade Federal de Viçosa - UFV
dc.source.none.fl_str_mv The Journal of Engineering and Exact Sciences; Vol. 4 No. 2 (2018); 0276-0285
The Journal of Engineering and Exact Sciences; Vol. 4 Núm. 2 (2018); 0276-0285
The Journal of Engineering and Exact Sciences; v. 4 n. 2 (2018); 0276-0285
2527-1075
reponame:The Journal of Engineering and Exact Sciences
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str The Journal of Engineering and Exact Sciences
collection The Journal of Engineering and Exact Sciences
repository.name.fl_str_mv The Journal of Engineering and Exact Sciences - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv
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