Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)

Detalhes bibliográficos
Autor(a) principal: Zappes, Ighor Antunes
Data de Publicação: 2014
Tipo de documento: Dissertação
Idioma: por
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://locus.ufv.br/handle/123456789/2288
Resumo: Among mammals from Brazilian biomes, rodent of genus Kerodon (Wied 1820), or mocó, englobes one of the most specialist species and one of the few endemic mammals from Brazilian semiarid, or caatinga, Kerodon rupestris, and other species from semi-arid islands within the savannah, or cerrado, Kerodon acrobata. Their distribution is fragmented, due to discontinuous rock outcrops where these animals live. It suggests an intraspecific variation among their populations. Cranial and cytogenetic studies with K. rupestris had showed a separation in three groups: one in Minas Gerais state, other in Bahia and the last in Ceará. This study investigated genes from populations of Kerodon species, in order to make analysis to check inter and intra variation. A small group from another locality, probably a hybrid, was also analyzed. We first characterize the karyotype of a female from K. acrobata. Giemsa staining, nucleolar organizer region (NOR) banding, C-positive heterochromatin banding and DAPI fluorescence were used in N metaphases of a specimen collected in Asa Branca Farm, in Aurora do Tocantins municipality, Tocantins state, Brazil. K. acrobata showed the same diploid number, fundamental number and chromosome morphology as Kerodon rupestris. But its NOR location and heterochromatin distribution patterns indicated a unique cytogenetic profile when compared to its sister species, emphasizing the evolutionary uniqueness of this relatively new and unknown species. This record also extends the distribution of this species northward. We also extracted DNA from livers and amplifications were made for gene Adh1-I2. After sequencing, alignments were done with ClustalW software. Phylogeny was inferred using Maximum Parsimony and Maximum Likelihood methods using PAUP software. Bayesian Analysis was also made, using MrBayes software. One haplotype network was done with DnaSP and Network. All trees and network showed similar results. These relations agree with variation observed in previous studies, separating K. rupestris populations in several groups. K. acrobata was also split in other groups, and some results indicate that the hybrid population is in fact a K. rupestris group in speciation. A possible explanation for these partitions is the fact that rock outcrops fragmented geography from caatinga during Pleistocene and events of expansion/retraction of the habitat may have generated population isolation and differentiation.
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spelling Zappes, Ighor Antuneshttp://lattes.cnpq.br/5091446865022479Santos, Jorge Abdala Dergam doshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780131D9Giudice, Gisele Mendes Lessa Delhttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4786794H3Hingst-zaher, Erikahttp://lattes.cnpq.br/67946518028078122015-03-26T13:03:06Z2015-01-232015-03-26T13:03:06Z2014-04-24ZAPPES, Ighor Antunes. Phylogeography and cytogenetics of the genus Kerodon (CUIVER, 1825) (RODENTIA: Caviidae). 2014. 55 f. Dissertação (Mestrado em Biologia e Manejo animal) - Universidade Federal de Viçosa, Viçosa, 2014.http://locus.ufv.br/handle/123456789/2288Among mammals from Brazilian biomes, rodent of genus Kerodon (Wied 1820), or mocó, englobes one of the most specialist species and one of the few endemic mammals from Brazilian semiarid, or caatinga, Kerodon rupestris, and other species from semi-arid islands within the savannah, or cerrado, Kerodon acrobata. Their distribution is fragmented, due to discontinuous rock outcrops where these animals live. It suggests an intraspecific variation among their populations. Cranial and cytogenetic studies with K. rupestris had showed a separation in three groups: one in Minas Gerais state, other in Bahia and the last in Ceará. This study investigated genes from populations of Kerodon species, in order to make analysis to check inter and intra variation. A small group from another locality, probably a hybrid, was also analyzed. We first characterize the karyotype of a female from K. acrobata. Giemsa staining, nucleolar organizer region (NOR) banding, C-positive heterochromatin banding and DAPI fluorescence were used in N metaphases of a specimen collected in Asa Branca Farm, in Aurora do Tocantins municipality, Tocantins state, Brazil. K. acrobata showed the same diploid number, fundamental number and chromosome morphology as Kerodon rupestris. But its NOR location and heterochromatin distribution patterns indicated a unique cytogenetic profile when compared to its sister species, emphasizing the evolutionary uniqueness of this relatively new and unknown species. This record also extends the distribution of this species northward. We also extracted DNA from livers and amplifications were made for gene Adh1-I2. After sequencing, alignments were done with ClustalW software. Phylogeny was inferred using Maximum Parsimony and Maximum Likelihood methods using PAUP software. Bayesian Analysis was also made, using MrBayes software. One haplotype network was done with DnaSP and Network. All trees and network showed similar results. These relations agree with variation observed in previous studies, separating K. rupestris populations in several groups. K. acrobata was also split in other groups, and some results indicate that the hybrid population is in fact a K. rupestris group in speciation. A possible explanation for these partitions is the fact that rock outcrops fragmented geography from caatinga during Pleistocene and events of expansion/retraction of the habitat may have generated population isolation and differentiation.Entre os mamíferos dos biomas brasileiros, os roedores do gênero Kerodon (Wied 1820), ou mocó, são um dos táxons mais especializados. Uma de suas espécies, o Kerodon rupestris, um dos poucos mamíferos endêmicos do semiárido brasileiro, a caatinga, possui sua distribuição fragmentada devido à descontinuidade dos afloramentos rochosos onde eles vivem, e isso favorece uma variação intraespecífica entre suas populações. A outra espécie do gênero, K. acrobata, vive em uma pequena área do cerrado, entre os estados de Tocantins e Goiás. O objetivo deste trabalho foi a caracterização citogenética de uma fêmea de Kerodon acrobata e molecular das duas espécies de Kerodon. Foi caracterizado o cariótipo de uma fêmea de K. acrobata, utilizando coloração Giemsa, bandeamento NOR, bandeamento de heterocromatina e fluorescência com DAPI. O espécime mostrou o mesmo número diploide, número fundamental e morfologia cromossômica que Kerodon rupestris. Porém, as localizações de NOR e de heterocromatina indicaram padrões diferentes em relação a outros roedores, enfatizando a singularidade dessa espécie. O DNA foi extraído de tecido hepático das duas espécies e amplificações foram feitas para o gene nuclear Adh1-I2. Após sequenciamento, alinhamentos foram realizados com o ClustalW. A filogenia foi inferida usando os métodos Máxima Parcimônia e Máxima Verossimilhança usando o PAUP e Análise Bayesiana, com o MrBayes. Uma rede de haplótipo foi realizada com os programas DnaSP e Network. O gene nuclear mostrou dois grupos bem estruturados: o primeiro formado por K acrobata sem resolução interna, e o segundo que incluiu as populações de K rupestris e três sequências do chamado híbrido . Os dados obtidos sugerem alta diferenciação citogenética e molecular entre K rupestris e K acrobata, indicando diferentes idades entre elas. O chamado híbrido pode representar uma população altamente divergente dentro de K rupestris, como resultado dentro da dinâmica de expansão e retração pleistocênica da caatinga.Fundação de Amparo a Pesquisa do Estado de Minas Geraisapplication/pdfporUniversidade Federal de ViçosaMestrado em Biologia AnimalUFVBRBiologia e Manejo animalMocóCitogenéticaFilogeografiaMocóCytogeneticsPhylogeographyCNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULARFilogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)Phylogeography and cytogenetics of the genus Kerodon (CUIVER, 1825) (RODENTIA: Caviidae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf826841https://locus.ufv.br//bitstream/123456789/2288/1/texto%20completo.pdf92f4e4ffd2622282089f913070a9b5cdMD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain85618https://locus.ufv.br//bitstream/123456789/2288/2/texto%20completo.pdf.txt0931c75aa503e7f1a8c7e9aaf878b545MD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3561https://locus.ufv.br//bitstream/123456789/2288/3/texto%20completo.pdf.jpg6e90e97e5ea919668e6b88ef6a14c26cMD53123456789/22882016-04-08 23:03:54.283oai:locus.ufv.br:123456789/2288Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-09T02:03:54LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.por.fl_str_mv Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
dc.title.alternative.eng.fl_str_mv Phylogeography and cytogenetics of the genus Kerodon (CUIVER, 1825) (RODENTIA: Caviidae)
title Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
spellingShingle Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
Zappes, Ighor Antunes
Mocó
Citogenética
Filogeografia
Mocó
Cytogenetics
Phylogeography
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
title_short Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
title_full Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
title_fullStr Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
title_full_unstemmed Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
title_sort Filogeografia e citogenética do gênero Kerodon (CUIVER, 1825) (RODENTIA: CAVIIDAE)
author Zappes, Ighor Antunes
author_facet Zappes, Ighor Antunes
author_role author
dc.contributor.authorLattes.por.fl_str_mv http://lattes.cnpq.br/5091446865022479
dc.contributor.author.fl_str_mv Zappes, Ighor Antunes
dc.contributor.advisor-co1.fl_str_mv Santos, Jorge Abdala Dergam dos
dc.contributor.advisor-co1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780131D9
dc.contributor.advisor1.fl_str_mv Giudice, Gisele Mendes Lessa Del
dc.contributor.advisor1Lattes.fl_str_mv http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4786794H3
dc.contributor.referee1.fl_str_mv Hingst-zaher, Erika
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/6794651802807812
contributor_str_mv Santos, Jorge Abdala Dergam dos
Giudice, Gisele Mendes Lessa Del
Hingst-zaher, Erika
dc.subject.por.fl_str_mv Mocó
Citogenética
Filogeografia
topic Mocó
Citogenética
Filogeografia
Mocó
Cytogenetics
Phylogeography
CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
dc.subject.eng.fl_str_mv Mocó
Cytogenetics
Phylogeography
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS BIOLOGICAS::BIOQUIMICA::BIOLOGIA MOLECULAR
description Among mammals from Brazilian biomes, rodent of genus Kerodon (Wied 1820), or mocó, englobes one of the most specialist species and one of the few endemic mammals from Brazilian semiarid, or caatinga, Kerodon rupestris, and other species from semi-arid islands within the savannah, or cerrado, Kerodon acrobata. Their distribution is fragmented, due to discontinuous rock outcrops where these animals live. It suggests an intraspecific variation among their populations. Cranial and cytogenetic studies with K. rupestris had showed a separation in three groups: one in Minas Gerais state, other in Bahia and the last in Ceará. This study investigated genes from populations of Kerodon species, in order to make analysis to check inter and intra variation. A small group from another locality, probably a hybrid, was also analyzed. We first characterize the karyotype of a female from K. acrobata. Giemsa staining, nucleolar organizer region (NOR) banding, C-positive heterochromatin banding and DAPI fluorescence were used in N metaphases of a specimen collected in Asa Branca Farm, in Aurora do Tocantins municipality, Tocantins state, Brazil. K. acrobata showed the same diploid number, fundamental number and chromosome morphology as Kerodon rupestris. But its NOR location and heterochromatin distribution patterns indicated a unique cytogenetic profile when compared to its sister species, emphasizing the evolutionary uniqueness of this relatively new and unknown species. This record also extends the distribution of this species northward. We also extracted DNA from livers and amplifications were made for gene Adh1-I2. After sequencing, alignments were done with ClustalW software. Phylogeny was inferred using Maximum Parsimony and Maximum Likelihood methods using PAUP software. Bayesian Analysis was also made, using MrBayes software. One haplotype network was done with DnaSP and Network. All trees and network showed similar results. These relations agree with variation observed in previous studies, separating K. rupestris populations in several groups. K. acrobata was also split in other groups, and some results indicate that the hybrid population is in fact a K. rupestris group in speciation. A possible explanation for these partitions is the fact that rock outcrops fragmented geography from caatinga during Pleistocene and events of expansion/retraction of the habitat may have generated population isolation and differentiation.
publishDate 2014
dc.date.issued.fl_str_mv 2014-04-24
dc.date.accessioned.fl_str_mv 2015-03-26T13:03:06Z
dc.date.available.fl_str_mv 2015-01-23
2015-03-26T13:03:06Z
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dc.identifier.citation.fl_str_mv ZAPPES, Ighor Antunes. Phylogeography and cytogenetics of the genus Kerodon (CUIVER, 1825) (RODENTIA: Caviidae). 2014. 55 f. Dissertação (Mestrado em Biologia e Manejo animal) - Universidade Federal de Viçosa, Viçosa, 2014.
dc.identifier.uri.fl_str_mv http://locus.ufv.br/handle/123456789/2288
identifier_str_mv ZAPPES, Ighor Antunes. Phylogeography and cytogenetics of the genus Kerodon (CUIVER, 1825) (RODENTIA: Caviidae). 2014. 55 f. Dissertação (Mestrado em Biologia e Manejo animal) - Universidade Federal de Viçosa, Viçosa, 2014.
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