Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling

Detalhes bibliográficos
Autor(a) principal: Silva, Anderson Rodrigo da
Data de Publicação: 2013
Outros Autores: Cecon, Paulo Roberto, Dias, Carlos Tadeu dos Santos, Puiatti, Mário, Finger, Fernando Luiz, Carneiro, Antônio Policarpo Souza
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: http://dx.doi.org/10.1590/S0103-90162014000100005
http://www.locus.ufv.br/handle/123456789/17755
Resumo: Multivariate techniques have become a useful tool for studying the phenotypic diversity of Germplasm Bank accessions, since they make it possible to combine a variety of different information from these accessions. This study aimed to characterize the phenotypic dispersion of garlic (Allium sativum L.) using two multivariate techniques with different objective functions. Twenty accessions were morphologically characterized for bulb diameter, length, and weight; number of cloves per bulb; number of leaves per plant; and leaf area. Techniques based on generalized quadratic distance of Mahalanobis, UPGMA (Unweighted Pair Group Method with Arithmetic Mean) clustering, and nMDS (nonmetrric MultiDimensional Scaling) were applied and the relative importance of variables quantified. The two multivariate techniques were capable of identifying cultivars with different characteristics, mainly regarding their classification in subgroups of common garlic or noble garlic, according to the number of cloves per bulb. The representation of the phenotypic distance of cultivars by multidimensional scaling was slightly more effective than that with UPGMA clustering.
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spelling Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scalingAllium sativum L.nMDSUPGMAGenetic divergenceMultivariate techniques have become a useful tool for studying the phenotypic diversity of Germplasm Bank accessions, since they make it possible to combine a variety of different information from these accessions. This study aimed to characterize the phenotypic dispersion of garlic (Allium sativum L.) using two multivariate techniques with different objective functions. Twenty accessions were morphologically characterized for bulb diameter, length, and weight; number of cloves per bulb; number of leaves per plant; and leaf area. Techniques based on generalized quadratic distance of Mahalanobis, UPGMA (Unweighted Pair Group Method with Arithmetic Mean) clustering, and nMDS (nonmetrric MultiDimensional Scaling) were applied and the relative importance of variables quantified. The two multivariate techniques were capable of identifying cultivars with different characteristics, mainly regarding their classification in subgroups of common garlic or noble garlic, according to the number of cloves per bulb. The representation of the phenotypic distance of cultivars by multidimensional scaling was slightly more effective than that with UPGMA clustering.Scientia Agricola2018-02-21T13:07:38Z2018-02-21T13:07:38Z2013-07-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlepdfapplication/pdf01039016http://dx.doi.org/10.1590/S0103-90162014000100005http://www.locus.ufv.br/handle/123456789/17755engv. 71, n. 1, p. 38-43, January/February 2014Silva, Anderson Rodrigo daCecon, Paulo RobertoDias, Carlos Tadeu dos SantosPuiatti, MárioFinger, Fernando LuizCarneiro, Antônio Policarpo Souzainfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-07-12T08:10:56Zoai:locus.ufv.br:123456789/17755Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-07-12T08:10:56LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.none.fl_str_mv Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
title Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
spellingShingle Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
Silva, Anderson Rodrigo da
Allium sativum L.
nMDS
UPGMA
Genetic divergence
title_short Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
title_full Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
title_fullStr Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
title_full_unstemmed Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
title_sort Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling
author Silva, Anderson Rodrigo da
author_facet Silva, Anderson Rodrigo da
Cecon, Paulo Roberto
Dias, Carlos Tadeu dos Santos
Puiatti, Mário
Finger, Fernando Luiz
Carneiro, Antônio Policarpo Souza
author_role author
author2 Cecon, Paulo Roberto
Dias, Carlos Tadeu dos Santos
Puiatti, Mário
Finger, Fernando Luiz
Carneiro, Antônio Policarpo Souza
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Silva, Anderson Rodrigo da
Cecon, Paulo Roberto
Dias, Carlos Tadeu dos Santos
Puiatti, Mário
Finger, Fernando Luiz
Carneiro, Antônio Policarpo Souza
dc.subject.por.fl_str_mv Allium sativum L.
nMDS
UPGMA
Genetic divergence
topic Allium sativum L.
nMDS
UPGMA
Genetic divergence
description Multivariate techniques have become a useful tool for studying the phenotypic diversity of Germplasm Bank accessions, since they make it possible to combine a variety of different information from these accessions. This study aimed to characterize the phenotypic dispersion of garlic (Allium sativum L.) using two multivariate techniques with different objective functions. Twenty accessions were morphologically characterized for bulb diameter, length, and weight; number of cloves per bulb; number of leaves per plant; and leaf area. Techniques based on generalized quadratic distance of Mahalanobis, UPGMA (Unweighted Pair Group Method with Arithmetic Mean) clustering, and nMDS (nonmetrric MultiDimensional Scaling) were applied and the relative importance of variables quantified. The two multivariate techniques were capable of identifying cultivars with different characteristics, mainly regarding their classification in subgroups of common garlic or noble garlic, according to the number of cloves per bulb. The representation of the phenotypic distance of cultivars by multidimensional scaling was slightly more effective than that with UPGMA clustering.
publishDate 2013
dc.date.none.fl_str_mv 2013-07-15
2018-02-21T13:07:38Z
2018-02-21T13:07:38Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv 01039016
http://dx.doi.org/10.1590/S0103-90162014000100005
http://www.locus.ufv.br/handle/123456789/17755
identifier_str_mv 01039016
url http://dx.doi.org/10.1590/S0103-90162014000100005
http://www.locus.ufv.br/handle/123456789/17755
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv v. 71, n. 1, p. 38-43, January/February 2014
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv pdf
application/pdf
dc.publisher.none.fl_str_mv Scientia Agricola
publisher.none.fl_str_mv Scientia Agricola
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str LOCUS Repositório Institucional da UFV
collection LOCUS Repositório Institucional da UFV
repository.name.fl_str_mv LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv fabiojreis@ufv.br
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