Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs

Detalhes bibliográficos
Autor(a) principal: Housman, Genevieve
Data de Publicação: 2015
Outros Autores: Malukiewicz, Joanna, Boere, Vanner, Grativol, Adriana D., Pereira, Luiz Cezar M., Silva, Ita de Oliveira e, Ruiz-Miranda, Carlos R., Truman, Richard, Stone, Anne C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://doi.org/10.1371/journal.pntd.0004198
http://www.locus.ufv.br/handle/123456789/12433
Resumo: Zoonotic pathogens that cause leprosy (Mycobacterium leprae) and tuberculosis (Mycobacterium tuberculosis complex, MTBC) continue to impact modern human populations. Therefore, methods able to survey mycobacterial infection in potential animal hosts are necessary for proper evaluation of human exposure threats. Here we tested for mycobacterial-specific single- and multi-copy loci using qPCR. In a trial study in which armadillos were artificially infected with M. leprae, these techniques were specific and sensitive to pathogen detection, while more traditional ELISAs were only specific. These assays were then employed in a case study to detect M. leprae as well as MTBC in wild marmosets. All marmosets were negative for M. leprae DNA, but 14 were positive for the mycobacterial rpoB gene assay. Targeted capture and sequencing of rpoB and other MTBC genes validated the presence of mycobacterial DNA in these samples and revealed that qPCR is useful for identifying mycobacterial-infected animal hosts.
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spelling Housman, GenevieveMalukiewicz, JoannaBoere, VannerGrativol, Adriana D.Pereira, Luiz Cezar M.Silva, Ita de Oliveira eRuiz-Miranda, Carlos R.Truman, RichardStone, Anne C.2017-10-26T12:30:28Z2017-10-26T12:30:28Z2015-11-161935-2735https://doi.org/10.1371/journal.pntd.0004198http://www.locus.ufv.br/handle/123456789/12433Zoonotic pathogens that cause leprosy (Mycobacterium leprae) and tuberculosis (Mycobacterium tuberculosis complex, MTBC) continue to impact modern human populations. Therefore, methods able to survey mycobacterial infection in potential animal hosts are necessary for proper evaluation of human exposure threats. Here we tested for mycobacterial-specific single- and multi-copy loci using qPCR. In a trial study in which armadillos were artificially infected with M. leprae, these techniques were specific and sensitive to pathogen detection, while more traditional ELISAs were only specific. These assays were then employed in a case study to detect M. leprae as well as MTBC in wild marmosets. All marmosets were negative for M. leprae DNA, but 14 were positive for the mycobacterial rpoB gene assay. Targeted capture and sequencing of rpoB and other MTBC genes validated the presence of mycobacterial DNA in these samples and revealed that qPCR is useful for identifying mycobacterial-infected animal hosts.engPLOS Neglected Tropical Diseases9(11), e0004198, Nov. 2015Detection of mycobacteriumNew world animal reservoirsValidation of qPCR methods for the detection of mycobacterium in new world animal reservoirsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALjournal.pntd.0004198.PDFjournal.pntd.0004198.PDFtextoapplication/pdf555532https://locus.ufv.br//bitstream/123456789/12433/1/journal.pntd.0004198.PDF0844cecdfed2808a4291bbca09f00a74MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/12433/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52THUMBNAILjournal.pntd.0004198.PDF.jpgjournal.pntd.0004198.PDF.jpgIM Thumbnailimage/jpeg6214https://locus.ufv.br//bitstream/123456789/12433/3/journal.pntd.0004198.PDF.jpg844df1472b9221b08622ff642cb92fe8MD53123456789/124332017-10-26 22:00:30.053oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452017-10-27T01:00:30LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
title Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
spellingShingle Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
Housman, Genevieve
Detection of mycobacterium
New world animal reservoirs
title_short Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
title_full Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
title_fullStr Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
title_full_unstemmed Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
title_sort Validation of qPCR methods for the detection of mycobacterium in new world animal reservoirs
author Housman, Genevieve
author_facet Housman, Genevieve
Malukiewicz, Joanna
Boere, Vanner
Grativol, Adriana D.
Pereira, Luiz Cezar M.
Silva, Ita de Oliveira e
Ruiz-Miranda, Carlos R.
Truman, Richard
Stone, Anne C.
author_role author
author2 Malukiewicz, Joanna
Boere, Vanner
Grativol, Adriana D.
Pereira, Luiz Cezar M.
Silva, Ita de Oliveira e
Ruiz-Miranda, Carlos R.
Truman, Richard
Stone, Anne C.
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Housman, Genevieve
Malukiewicz, Joanna
Boere, Vanner
Grativol, Adriana D.
Pereira, Luiz Cezar M.
Silva, Ita de Oliveira e
Ruiz-Miranda, Carlos R.
Truman, Richard
Stone, Anne C.
dc.subject.pt-BR.fl_str_mv Detection of mycobacterium
New world animal reservoirs
topic Detection of mycobacterium
New world animal reservoirs
description Zoonotic pathogens that cause leprosy (Mycobacterium leprae) and tuberculosis (Mycobacterium tuberculosis complex, MTBC) continue to impact modern human populations. Therefore, methods able to survey mycobacterial infection in potential animal hosts are necessary for proper evaluation of human exposure threats. Here we tested for mycobacterial-specific single- and multi-copy loci using qPCR. In a trial study in which armadillos were artificially infected with M. leprae, these techniques were specific and sensitive to pathogen detection, while more traditional ELISAs were only specific. These assays were then employed in a case study to detect M. leprae as well as MTBC in wild marmosets. All marmosets were negative for M. leprae DNA, but 14 were positive for the mycobacterial rpoB gene assay. Targeted capture and sequencing of rpoB and other MTBC genes validated the presence of mycobacterial DNA in these samples and revealed that qPCR is useful for identifying mycobacterial-infected animal hosts.
publishDate 2015
dc.date.issued.fl_str_mv 2015-11-16
dc.date.accessioned.fl_str_mv 2017-10-26T12:30:28Z
dc.date.available.fl_str_mv 2017-10-26T12:30:28Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv https://doi.org/10.1371/journal.pntd.0004198
http://www.locus.ufv.br/handle/123456789/12433
dc.identifier.issn.none.fl_str_mv 1935-2735
identifier_str_mv 1935-2735
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http://www.locus.ufv.br/handle/123456789/12433
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dc.relation.ispartofseries.pt-BR.fl_str_mv 9(11), e0004198, Nov. 2015
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