A set of standard area diagrams to assess white mold severity on the leaflets of common beans

Detalhes bibliográficos
Autor(a) principal: Fagundes-Nacarath, Inaia Rhavene Freire
Data de Publicação: 2018
Outros Autores: Debona, Daniel, Novaes, Maria Izabel Costa, Rodrigues, Fabrício Ávila
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://doi-org.ez35.periodicos.capes.gov.br/10.1016/j.cropro.2018.08.007
http://www.locus.ufv.br/handle/123456789/23467
Resumo: The fungus Sclerotinia sclerotiorum is the major pathogen affecting common beans yield worldwide and an adequate disease quantification is demanded in some trials. However, a set of standard area diagrams (SADs) to aid visual assessment of severity of white mold (SWM) is lacking. This study developed SADs consisting of eight color images of diseased leaflets with severity values that ranged from 0.4 to 53.7%. Twenty raters [10 experienced (ER) and 10 inexperienced (IR)] validated the SADs by assessing the same set of 50 images twice, the first without SADs and the second using it as an aid. The SADs significantly improved both accuracy and precision for IR as evidenced by increases from 0.86 to 0.98 in the coefficients of bias (Cb) from 0.93 to 0.98 in correlation coefficient (r) and from 0.86 to 0.96 in overall agreement [Lin's concordance correlation coefficients (ρc)] without and with SADs, respectively, whereas for ER only precision (r) was improved by SADs. The SWM estimates were also more reliable because inter-rater reliability (coefficient of determination, R2) was significantly increased for both ER and IR by using SADs. Therefore, the SADs presented is thought to be a valuable tool to provide accurate, precise and reliable estimates of the SWM on common bean leaflets in epidemiological studies, evaluation of disease control methods, assessment of aggressiveness of pathogen isolates, disease resistance and other types of surveys regarding the common beans-S. sclerotiorum interaction.
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spelling Fagundes-Nacarath, Inaia Rhavene FreireDebona, DanielNovaes, Maria Izabel CostaRodrigues, Fabrício Ávila2019-02-11T12:41:29Z2019-02-11T12:41:29Z2018-120261-2194https://doi-org.ez35.periodicos.capes.gov.br/10.1016/j.cropro.2018.08.007http://www.locus.ufv.br/handle/123456789/23467The fungus Sclerotinia sclerotiorum is the major pathogen affecting common beans yield worldwide and an adequate disease quantification is demanded in some trials. However, a set of standard area diagrams (SADs) to aid visual assessment of severity of white mold (SWM) is lacking. This study developed SADs consisting of eight color images of diseased leaflets with severity values that ranged from 0.4 to 53.7%. Twenty raters [10 experienced (ER) and 10 inexperienced (IR)] validated the SADs by assessing the same set of 50 images twice, the first without SADs and the second using it as an aid. The SADs significantly improved both accuracy and precision for IR as evidenced by increases from 0.86 to 0.98 in the coefficients of bias (Cb) from 0.93 to 0.98 in correlation coefficient (r) and from 0.86 to 0.96 in overall agreement [Lin's concordance correlation coefficients (ρc)] without and with SADs, respectively, whereas for ER only precision (r) was improved by SADs. The SWM estimates were also more reliable because inter-rater reliability (coefficient of determination, R2) was significantly increased for both ER and IR by using SADs. Therefore, the SADs presented is thought to be a valuable tool to provide accurate, precise and reliable estimates of the SWM on common bean leaflets in epidemiological studies, evaluation of disease control methods, assessment of aggressiveness of pathogen isolates, disease resistance and other types of surveys regarding the common beans-S. sclerotiorum interaction.engCrop ProtectionVolume 114, Pages 60-67, December 20182018 Elsevier Ltd. All rights reserved.info:eu-repo/semantics/openAccessPhaseolus vulgarisSclerotinia sclerotiorumDisease assessmentDisease severityEpidemiologyPhytopathometryA set of standard area diagrams to assess white mold severity on the leaflets of common beansinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALartigo.pdfartigo.pdfTexto completoapplication/pdf941485https://locus.ufv.br//bitstream/123456789/23467/1/artigo.pdf1a2c8bba341f238c99a20231f2883e82MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81748https://locus.ufv.br//bitstream/123456789/23467/2/license.txt8a4605be74aa9ea9d79846c1fba20a33MD52123456789/234672019-02-11 10:10:02.377oai:locus.ufv.br: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Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452019-02-11T13:10:02LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.en.fl_str_mv A set of standard area diagrams to assess white mold severity on the leaflets of common beans
title A set of standard area diagrams to assess white mold severity on the leaflets of common beans
spellingShingle A set of standard area diagrams to assess white mold severity on the leaflets of common beans
Fagundes-Nacarath, Inaia Rhavene Freire
Phaseolus vulgaris
Sclerotinia sclerotiorum
Disease assessment
Disease severity
Epidemiology
Phytopathometry
title_short A set of standard area diagrams to assess white mold severity on the leaflets of common beans
title_full A set of standard area diagrams to assess white mold severity on the leaflets of common beans
title_fullStr A set of standard area diagrams to assess white mold severity on the leaflets of common beans
title_full_unstemmed A set of standard area diagrams to assess white mold severity on the leaflets of common beans
title_sort A set of standard area diagrams to assess white mold severity on the leaflets of common beans
author Fagundes-Nacarath, Inaia Rhavene Freire
author_facet Fagundes-Nacarath, Inaia Rhavene Freire
Debona, Daniel
Novaes, Maria Izabel Costa
Rodrigues, Fabrício Ávila
author_role author
author2 Debona, Daniel
Novaes, Maria Izabel Costa
Rodrigues, Fabrício Ávila
author2_role author
author
author
dc.contributor.author.fl_str_mv Fagundes-Nacarath, Inaia Rhavene Freire
Debona, Daniel
Novaes, Maria Izabel Costa
Rodrigues, Fabrício Ávila
dc.subject.pt-BR.fl_str_mv Phaseolus vulgaris
Sclerotinia sclerotiorum
Disease assessment
Disease severity
Epidemiology
Phytopathometry
topic Phaseolus vulgaris
Sclerotinia sclerotiorum
Disease assessment
Disease severity
Epidemiology
Phytopathometry
description The fungus Sclerotinia sclerotiorum is the major pathogen affecting common beans yield worldwide and an adequate disease quantification is demanded in some trials. However, a set of standard area diagrams (SADs) to aid visual assessment of severity of white mold (SWM) is lacking. This study developed SADs consisting of eight color images of diseased leaflets with severity values that ranged from 0.4 to 53.7%. Twenty raters [10 experienced (ER) and 10 inexperienced (IR)] validated the SADs by assessing the same set of 50 images twice, the first without SADs and the second using it as an aid. The SADs significantly improved both accuracy and precision for IR as evidenced by increases from 0.86 to 0.98 in the coefficients of bias (Cb) from 0.93 to 0.98 in correlation coefficient (r) and from 0.86 to 0.96 in overall agreement [Lin's concordance correlation coefficients (ρc)] without and with SADs, respectively, whereas for ER only precision (r) was improved by SADs. The SWM estimates were also more reliable because inter-rater reliability (coefficient of determination, R2) was significantly increased for both ER and IR by using SADs. Therefore, the SADs presented is thought to be a valuable tool to provide accurate, precise and reliable estimates of the SWM on common bean leaflets in epidemiological studies, evaluation of disease control methods, assessment of aggressiveness of pathogen isolates, disease resistance and other types of surveys regarding the common beans-S. sclerotiorum interaction.
publishDate 2018
dc.date.issued.fl_str_mv 2018-12
dc.date.accessioned.fl_str_mv 2019-02-11T12:41:29Z
dc.date.available.fl_str_mv 2019-02-11T12:41:29Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://doi-org.ez35.periodicos.capes.gov.br/10.1016/j.cropro.2018.08.007
http://www.locus.ufv.br/handle/123456789/23467
dc.identifier.issn.none.fl_str_mv 0261-2194
identifier_str_mv 0261-2194
url https://doi-org.ez35.periodicos.capes.gov.br/10.1016/j.cropro.2018.08.007
http://www.locus.ufv.br/handle/123456789/23467
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartofseries.pt-BR.fl_str_mv Volume 114, Pages 60-67, December 2018
dc.rights.driver.fl_str_mv 2018 Elsevier Ltd. All rights reserved.
info:eu-repo/semantics/openAccess
rights_invalid_str_mv 2018 Elsevier Ltd. All rights reserved.
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Crop Protection
publisher.none.fl_str_mv Crop Protection
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
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institution UFV
reponame_str LOCUS Repositório Institucional da UFV
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