Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul
Autor(a) principal: | |
---|---|
Data de Publicação: | 2013 |
Tipo de documento: | Tese |
Idioma: | por |
Título da fonte: | LOCUS Repositório Institucional da UFV |
Texto Completo: | http://locus.ufv.br/handle/123456789/1381 |
Resumo: | South America is the continent with the largest number of freshwater fish species. To understand which facts were responsible for this diversification, analyses considering paleoclimatic, geomorphologic and paleohidrologic effects in the cladogenesis of widely distributed taxa are necessary. Phylogeographic patterns of Hoplias malabaricus populations from South America basins were characterized in this study with DNA sequences (mitochondrial and nuclear) and cytogenetic data, including results in paleohidrologic scenario and comparing not related fish fauna distribution. Two hundred and eighty-three specimens were analyzed. Bayesian and maximum parsimony analyses were performed with mitochondrial ATP synthase 6 gene (ATPase6). Haplotypes networks with ATPase6 and recombination activating nuclear 2 (RAG2) genes were constructed with Network 4.6.1.1. Software. Time divergence between haplogroups was estimated using ATPase6 gene sequences on BEAST 1.5.1. Software. North/northwest of South America was identified as H. malabaricus origin center and on Miocene this taxon expanded its distribution to the southern part of the continent. The diploid number reduction from 42 to 40 chromosomes was already established at this time. During Pliocene, canyon and Sete Quedas waterfalls were forming and populations with 2n = 40C from the lower Paraná River were separated from those from the upper part of the basin, where 2n = 39/40D karyomorph was established. The ATPase6 gene variation in Amazon Basin, indicated two possible scenarios: during the lower Pliocene, there was a second diploid number reduction in H. malabaricus, or there was gene flowing between specimens with 2n=40 and 2n=42 chromosomes. After lower Pliocene, 2n = 40F karyomorph settled in São Francisco, Parnaíba and northeast Brazilian coastal river basins. During Pleistocene, paleo-channels with freshwater on Brazilian Coast allowed gene flowing among H. malabaricus populations, today isolated in this region. The evolution and diversification of H. malabaricus populations, and probably other freshwater fish species from South America, are due to three main factors. The first is the implications of the Andes upflit, which brought important paleohidrologic changes and consequently changes on South America H. malabaricus distribution. The second factor involves local dynamics of stream piracy due to geological faults reactivation or differential erosion processes, which lead some drainages to present a mosaic of genealogical lineages that differed in neighboring basins (eg. upper Paraná). The third factor involves the glacial dynamics, leading to confluence and subsequent separation of river basins on coastal geomorphological sections and consequently a small genetic distance among populations today isolated. |
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Santos, Udsonhttp://lattes.cnpq.br/8715098938592033Yotoko, Karla Suemy Clementehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763141P7Pazza, Rubenshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763180T0Santos, Jorge Abdala Dergam doshttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780131D9Barroca, Tatiana Mourahttp://lattes.cnpq.br/4397056059310851Oliveira, Luiz Orlando dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781626T2Campos, Lúcio Antonio de Oliveirahttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783908P9Siqueira, Cláudio Lísias Mafra dehttp://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4782432A82015-03-26T12:45:39Z2013-11-112015-03-26T12:45:39Z2013-07-16SANTOS, Udson. Phylogeography of trahiras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) from South American watersheds. 2013. 135 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2013.http://locus.ufv.br/handle/123456789/1381South America is the continent with the largest number of freshwater fish species. To understand which facts were responsible for this diversification, analyses considering paleoclimatic, geomorphologic and paleohidrologic effects in the cladogenesis of widely distributed taxa are necessary. Phylogeographic patterns of Hoplias malabaricus populations from South America basins were characterized in this study with DNA sequences (mitochondrial and nuclear) and cytogenetic data, including results in paleohidrologic scenario and comparing not related fish fauna distribution. Two hundred and eighty-three specimens were analyzed. Bayesian and maximum parsimony analyses were performed with mitochondrial ATP synthase 6 gene (ATPase6). Haplotypes networks with ATPase6 and recombination activating nuclear 2 (RAG2) genes were constructed with Network 4.6.1.1. Software. Time divergence between haplogroups was estimated using ATPase6 gene sequences on BEAST 1.5.1. Software. North/northwest of South America was identified as H. malabaricus origin center and on Miocene this taxon expanded its distribution to the southern part of the continent. The diploid number reduction from 42 to 40 chromosomes was already established at this time. During Pliocene, canyon and Sete Quedas waterfalls were forming and populations with 2n = 40C from the lower Paraná River were separated from those from the upper part of the basin, where 2n = 39/40D karyomorph was established. The ATPase6 gene variation in Amazon Basin, indicated two possible scenarios: during the lower Pliocene, there was a second diploid number reduction in H. malabaricus, or there was gene flowing between specimens with 2n=40 and 2n=42 chromosomes. After lower Pliocene, 2n = 40F karyomorph settled in São Francisco, Parnaíba and northeast Brazilian coastal river basins. During Pleistocene, paleo-channels with freshwater on Brazilian Coast allowed gene flowing among H. malabaricus populations, today isolated in this region. The evolution and diversification of H. malabaricus populations, and probably other freshwater fish species from South America, are due to three main factors. The first is the implications of the Andes upflit, which brought important paleohidrologic changes and consequently changes on South America H. malabaricus distribution. The second factor involves local dynamics of stream piracy due to geological faults reactivation or differential erosion processes, which lead some drainages to present a mosaic of genealogical lineages that differed in neighboring basins (eg. upper Paraná). The third factor involves the glacial dynamics, leading to confluence and subsequent separation of river basins on coastal geomorphological sections and consequently a small genetic distance among populations today isolated.A América do Sul é o continente com o maior número de espécies de peixes de água doce no mundo. Para compreender os processos responsáveis por esta espetacular diversificação é preciso uma análise que inclua os processos paleoclimáticos, geomorfológicos e paleohidrológicos na cladogênese de táxons de ampla distribuição. Este trabalho caracterizou os padrões filogeográficos de Hoplias malabaricus das bacias hidrográficas da América do Sul, utilizando sequências de DNA (mitocondrial e nuclear) e dados citogenéticos, incluindo os resultados no contexto paleohidrológico e de distribuição de fauna nessa região. Duzentos e oitenta e três espécimes foram analisados. As análises de inferência bayesiana e máxima parcimônia foram realizadas utilizando o gene mitocondrial ATP sintase 6 (ATPase6). As redes de haplótipos com os genes ATPase6 e nuclear ativador de recombinação 2 (RAG2) foram construídas utilizando o software Network 4.6.1.1. A estimativa de tempo de divergência entre os haplogrupos foi realizada utilizando as sequências do gene ATPase6 no software BEAST 1.5.1. O norte/noroeste da América do Sul foi identificado como o centro de origem de Hoplias malabaricus e a partir do Mioceno este táxon aumentou a distribuição para o sul do continente. Nesta época, a redução do número diploide de 42 para 40 cromossomos já estava estabelecida. A partir do Plioceno, a formação do cânion e salto de Sete Quedas levou ao isolamento das populações com o cariomorfo 2n=40C do baixo rio Paraná daquelas da porção alta da bacia, onde se estabeleceu o cariomorfo 2n=39/40D. Na bacia hidrográfica amazônica, o padrão de variação do gene ATPase6 indicou dois cenários possíveis: durante o Plioceno inferior ocorreu uma segunda redução no número diploide de 2n=42 para 2n=40 cromossomos em H. malabaricus, ou ocorreu fluxo gênico entre espécimes que possuem o número diploide diferente. A partir do Plioceno, espécimes com o cariomorfo 2n=40F estabeleceram-se nos rios São Francisco e Parnaíba e nas bacias costeiras do nordeste do Brasil. Durante o Pleistoceno, a formação de paleo-canais com água doce, na linha da costa oriental do continente, permitiu o fluxo gênico entre populações de H. malabaricus que hoje estão isoladas nas bacias costeiras. A evolução e diversificação das populações de Hoplias malabaricus, e possivelmente de outras espécies de peixes dulcícolas da América do Sul, são decorrentes de três principais fatores. O primeiro são implicações do soerguimento dos Andes, as quais determinaram importantes mudanças paleohidrológicas e consequentemente no padrão de distribuição das populações deste táxon em todo o continente. O segundo envolve dinâmicas locais de capturas de cabeceiras decorrentes de reativação de falhas geológicas ou processos erosivos diferenciais, os quais levam a algumas drenagens a apresentarem um mosaico de linhagens genealógicas que diferenciaram nas bacias vizinhas (ex. alto Paraná). O terceiro fator envolve as dinâmicas glaciais, que levaram à confluência e posterior separação de grupos de drenagens costeiras em setores geomorfológicos bem definidos e consequentemente a uma pequena distância genética entre populações hoje isoladas.Conselho Nacional de Desenvolvimento Científico e Tecnológicoapplication/pdfporUniversidade Federal de ViçosaDoutorado em Genética e MelhoramentoUFVBRGenética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; MeFilogeografiaPeixesAmérica do SulPaleohidrografiaPhylogeographyFishSouth AmericaPaleohidrografiaCNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMALFilogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do SulPhylogeography of trahiras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) from South American watershedsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/doctoralThesisinfo:eu-repo/semantics/openAccessreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFVORIGINALtexto completo.pdfapplication/pdf3287656https://locus.ufv.br//bitstream/123456789/1381/1/texto%20completo.pdf0de14e1605e3a007076228efe74112c7MD51TEXTtexto completo.pdf.txttexto completo.pdf.txtExtracted texttext/plain226026https://locus.ufv.br//bitstream/123456789/1381/2/texto%20completo.pdf.txt97f7e2e95fec3c68d524b34585b3308eMD52THUMBNAILtexto completo.pdf.jpgtexto completo.pdf.jpgIM Thumbnailimage/jpeg3502https://locus.ufv.br//bitstream/123456789/1381/3/texto%20completo.pdf.jpgbcf6baa2c03c9fa0004a6d11a6ff49dbMD53123456789/13812016-04-07 23:07:17.094oai:locus.ufv.br:123456789/1381Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452016-04-08T02:07:17LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false |
dc.title.por.fl_str_mv |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
dc.title.alternative.eng.fl_str_mv |
Phylogeography of trahiras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) from South American watersheds |
title |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
spellingShingle |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul Santos, Udson Filogeografia Peixes América do Sul Paleohidrografia Phylogeography Fish South America Paleohidrografia CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL |
title_short |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
title_full |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
title_fullStr |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
title_full_unstemmed |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
title_sort |
Filogeografia de traíras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) das bacias hidrográficas da América do Sul |
author |
Santos, Udson |
author_facet |
Santos, Udson |
author_role |
author |
dc.contributor.authorLattes.por.fl_str_mv |
http://lattes.cnpq.br/8715098938592033 |
dc.contributor.author.fl_str_mv |
Santos, Udson |
dc.contributor.advisor-co1.fl_str_mv |
Yotoko, Karla Suemy Clemente |
dc.contributor.advisor-co1Lattes.fl_str_mv |
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763141P7 |
dc.contributor.advisor-co2.fl_str_mv |
Pazza, Rubens |
dc.contributor.advisor-co2Lattes.fl_str_mv |
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4763180T0 |
dc.contributor.advisor1.fl_str_mv |
Santos, Jorge Abdala Dergam dos |
dc.contributor.advisor1Lattes.fl_str_mv |
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4780131D9 |
dc.contributor.referee1.fl_str_mv |
Barroca, Tatiana Moura |
dc.contributor.referee1Lattes.fl_str_mv |
http://lattes.cnpq.br/4397056059310851 |
dc.contributor.referee2.fl_str_mv |
Oliveira, Luiz Orlando de |
dc.contributor.referee2Lattes.fl_str_mv |
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4781626T2 |
dc.contributor.referee3.fl_str_mv |
Campos, Lúcio Antonio de Oliveira |
dc.contributor.referee3Lattes.fl_str_mv |
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4783908P9 |
dc.contributor.referee4.fl_str_mv |
Siqueira, Cláudio Lísias Mafra de |
dc.contributor.referee4Lattes.fl_str_mv |
http://buscatextual.cnpq.br/buscatextual/visualizacv.do?id=K4782432A8 |
contributor_str_mv |
Yotoko, Karla Suemy Clemente Pazza, Rubens Santos, Jorge Abdala Dergam dos Barroca, Tatiana Moura Oliveira, Luiz Orlando de Campos, Lúcio Antonio de Oliveira Siqueira, Cláudio Lísias Mafra de |
dc.subject.por.fl_str_mv |
Filogeografia Peixes América do Sul Paleohidrografia |
topic |
Filogeografia Peixes América do Sul Paleohidrografia Phylogeography Fish South America Paleohidrografia CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL |
dc.subject.eng.fl_str_mv |
Phylogeography Fish South America Paleohidrografia |
dc.subject.cnpq.fl_str_mv |
CNPQ::CIENCIAS BIOLOGICAS::GENETICA::GENETICA ANIMAL |
description |
South America is the continent with the largest number of freshwater fish species. To understand which facts were responsible for this diversification, analyses considering paleoclimatic, geomorphologic and paleohidrologic effects in the cladogenesis of widely distributed taxa are necessary. Phylogeographic patterns of Hoplias malabaricus populations from South America basins were characterized in this study with DNA sequences (mitochondrial and nuclear) and cytogenetic data, including results in paleohidrologic scenario and comparing not related fish fauna distribution. Two hundred and eighty-three specimens were analyzed. Bayesian and maximum parsimony analyses were performed with mitochondrial ATP synthase 6 gene (ATPase6). Haplotypes networks with ATPase6 and recombination activating nuclear 2 (RAG2) genes were constructed with Network 4.6.1.1. Software. Time divergence between haplogroups was estimated using ATPase6 gene sequences on BEAST 1.5.1. Software. North/northwest of South America was identified as H. malabaricus origin center and on Miocene this taxon expanded its distribution to the southern part of the continent. The diploid number reduction from 42 to 40 chromosomes was already established at this time. During Pliocene, canyon and Sete Quedas waterfalls were forming and populations with 2n = 40C from the lower Paraná River were separated from those from the upper part of the basin, where 2n = 39/40D karyomorph was established. The ATPase6 gene variation in Amazon Basin, indicated two possible scenarios: during the lower Pliocene, there was a second diploid number reduction in H. malabaricus, or there was gene flowing between specimens with 2n=40 and 2n=42 chromosomes. After lower Pliocene, 2n = 40F karyomorph settled in São Francisco, Parnaíba and northeast Brazilian coastal river basins. During Pleistocene, paleo-channels with freshwater on Brazilian Coast allowed gene flowing among H. malabaricus populations, today isolated in this region. The evolution and diversification of H. malabaricus populations, and probably other freshwater fish species from South America, are due to three main factors. The first is the implications of the Andes upflit, which brought important paleohidrologic changes and consequently changes on South America H. malabaricus distribution. The second factor involves local dynamics of stream piracy due to geological faults reactivation or differential erosion processes, which lead some drainages to present a mosaic of genealogical lineages that differed in neighboring basins (eg. upper Paraná). The third factor involves the glacial dynamics, leading to confluence and subsequent separation of river basins on coastal geomorphological sections and consequently a small genetic distance among populations today isolated. |
publishDate |
2013 |
dc.date.available.fl_str_mv |
2013-11-11 2015-03-26T12:45:39Z |
dc.date.issued.fl_str_mv |
2013-07-16 |
dc.date.accessioned.fl_str_mv |
2015-03-26T12:45:39Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/doctoralThesis |
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doctoralThesis |
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dc.identifier.citation.fl_str_mv |
SANTOS, Udson. Phylogeography of trahiras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) from South American watersheds. 2013. 135 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2013. |
dc.identifier.uri.fl_str_mv |
http://locus.ufv.br/handle/123456789/1381 |
identifier_str_mv |
SANTOS, Udson. Phylogeography of trahiras Hoplias malabaricus (Bloch, 1794) (Teleostei, Erythrinidae) from South American watersheds. 2013. 135 f. Tese (Doutorado em Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me) - Universidade Federal de Viçosa, Viçosa, 2013. |
url |
http://locus.ufv.br/handle/123456789/1381 |
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por |
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por |
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Universidade Federal de Viçosa |
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Doutorado em Genética e Melhoramento |
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UFV |
dc.publisher.country.fl_str_mv |
BR |
dc.publisher.department.fl_str_mv |
Genética animal; Genética molecular e de microrganismos; Genética quantitativa; Genética vegetal; Me |
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Universidade Federal de Viçosa |
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