Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs

Detalhes bibliográficos
Autor(a) principal: Zhang, Xiong
Data de Publicação: 2024
Outros Autores: Wang, Jing, Zhao, Chunping, Zhang, Jing
Tipo de documento: Artigo
Idioma: eng
Título da fonte: LOCUS Repositório Institucional da UFV
Texto Completo: https://locus.ufv.br/handle/123456789/32615
https://doi.org/10.37496/rbz5320220122
Resumo: This study was conducted to investigate the polymorphism of the silence information regulator 5 (SIRT5) gene in 103 Congjiang Xiang pigs from Southwest China. We searched for SNP (single nucleotide polymorphism) loci of SIRT5 gene through sequence alignment and PCR. We obtained nine SNP loci: g.14135 A>C (intron 6), g.14247 C>A (intron 6), g.14305 C>T (exon 7), g.14335 C>T (exon 7), g.16603 T>C (intron 7), g.16613 T>C (intron 7), g.16800 G>A (intron 7), g.16812 C>G (intron 7), and g.16916 A>G (exon 8). Further analysis of SNP genotypes associated with the carcass traits of skin thickness, backfat thickness, and eye muscle area was carried out in pigs. We found that the genotypes g.14305 C>T (CC) and g.16812 C>G (CG) had certain advantages for improving the carcass traits of Congjiang Xiang pigs. The haplotype combination of the SIRT5 gene that improved skin thickness was H2H3:CCGGCTCA. These results may provide empirical support for molecular-based breeding of carcass traits in Congjiang Xiang pigs.
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spelling Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigsCarcass traitsCongjiang Xiang pigSIRT5SNPThis study was conducted to investigate the polymorphism of the silence information regulator 5 (SIRT5) gene in 103 Congjiang Xiang pigs from Southwest China. We searched for SNP (single nucleotide polymorphism) loci of SIRT5 gene through sequence alignment and PCR. We obtained nine SNP loci: g.14135 A>C (intron 6), g.14247 C>A (intron 6), g.14305 C>T (exon 7), g.14335 C>T (exon 7), g.16603 T>C (intron 7), g.16613 T>C (intron 7), g.16800 G>A (intron 7), g.16812 C>G (intron 7), and g.16916 A>G (exon 8). Further analysis of SNP genotypes associated with the carcass traits of skin thickness, backfat thickness, and eye muscle area was carried out in pigs. We found that the genotypes g.14305 C>T (CC) and g.16812 C>G (CG) had certain advantages for improving the carcass traits of Congjiang Xiang pigs. The haplotype combination of the SIRT5 gene that improved skin thickness was H2H3:CCGGCTCA. These results may provide empirical support for molecular-based breeding of carcass traits in Congjiang Xiang pigs.Brazilian Journal of Animal Science2024-08-14T20:53:02Z2024info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfZHANG, X.; WANG, J.;ZHAO, C.; ZHANG, J. Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs. Revista Brasileira de Zootecnia, Viçosa, v. 53, p. 01- 09, 2024. DOI: 10.37496/rbz5320220122.1516-35981806-9290 (eletrônico)https://locus.ufv.br/handle/123456789/32615https://doi.org/10.37496/rbz5320220122engv. 53Creative Commons Attribution Licenseinfo:eu-repo/semantics/openAccessZhang, XiongWang, JingZhao, ChunpingZhang, Jingreponame:LOCUS Repositório Institucional da UFVinstname:Universidade Federal de Viçosa (UFV)instacron:UFV2024-08-15T06:03:49Zoai:locus.ufv.br:123456789/32615Repositório InstitucionalPUBhttps://www.locus.ufv.br/oai/requestfabiojreis@ufv.bropendoar:21452024-08-15T06:03:49LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)false
dc.title.none.fl_str_mv Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
title Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
spellingShingle Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
Zhang, Xiong
Carcass traits
Congjiang Xiang pig
SIRT5
SNP
title_short Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
title_full Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
title_fullStr Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
title_full_unstemmed Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
title_sort Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs
author Zhang, Xiong
author_facet Zhang, Xiong
Wang, Jing
Zhao, Chunping
Zhang, Jing
author_role author
author2 Wang, Jing
Zhao, Chunping
Zhang, Jing
author2_role author
author
author
dc.contributor.author.fl_str_mv Zhang, Xiong
Wang, Jing
Zhao, Chunping
Zhang, Jing
dc.subject.por.fl_str_mv Carcass traits
Congjiang Xiang pig
SIRT5
SNP
topic Carcass traits
Congjiang Xiang pig
SIRT5
SNP
description This study was conducted to investigate the polymorphism of the silence information regulator 5 (SIRT5) gene in 103 Congjiang Xiang pigs from Southwest China. We searched for SNP (single nucleotide polymorphism) loci of SIRT5 gene through sequence alignment and PCR. We obtained nine SNP loci: g.14135 A>C (intron 6), g.14247 C>A (intron 6), g.14305 C>T (exon 7), g.14335 C>T (exon 7), g.16603 T>C (intron 7), g.16613 T>C (intron 7), g.16800 G>A (intron 7), g.16812 C>G (intron 7), and g.16916 A>G (exon 8). Further analysis of SNP genotypes associated with the carcass traits of skin thickness, backfat thickness, and eye muscle area was carried out in pigs. We found that the genotypes g.14305 C>T (CC) and g.16812 C>G (CG) had certain advantages for improving the carcass traits of Congjiang Xiang pigs. The haplotype combination of the SIRT5 gene that improved skin thickness was H2H3:CCGGCTCA. These results may provide empirical support for molecular-based breeding of carcass traits in Congjiang Xiang pigs.
publishDate 2024
dc.date.none.fl_str_mv 2024-08-14T20:53:02Z
2024
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv ZHANG, X.; WANG, J.;ZHAO, C.; ZHANG, J. Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs. Revista Brasileira de Zootecnia, Viçosa, v. 53, p. 01- 09, 2024. DOI: 10.37496/rbz5320220122.
1516-3598
1806-9290 (eletrônico)
https://locus.ufv.br/handle/123456789/32615
https://doi.org/10.37496/rbz5320220122
identifier_str_mv ZHANG, X.; WANG, J.;ZHAO, C.; ZHANG, J. Genetic polymorphisms in SIRT5 gene and their association with carcass traits in Congjiang Xiang pigs. Revista Brasileira de Zootecnia, Viçosa, v. 53, p. 01- 09, 2024. DOI: 10.37496/rbz5320220122.
1516-3598
1806-9290 (eletrônico)
url https://locus.ufv.br/handle/123456789/32615
https://doi.org/10.37496/rbz5320220122
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv v. 53
dc.rights.driver.fl_str_mv Creative Commons Attribution License
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Creative Commons Attribution License
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Brazilian Journal of Animal Science
publisher.none.fl_str_mv Brazilian Journal of Animal Science
dc.source.none.fl_str_mv reponame:LOCUS Repositório Institucional da UFV
instname:Universidade Federal de Viçosa (UFV)
instacron:UFV
instname_str Universidade Federal de Viçosa (UFV)
instacron_str UFV
institution UFV
reponame_str LOCUS Repositório Institucional da UFV
collection LOCUS Repositório Institucional da UFV
repository.name.fl_str_mv LOCUS Repositório Institucional da UFV - Universidade Federal de Viçosa (UFV)
repository.mail.fl_str_mv fabiojreis@ufv.br
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