Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing

Detalhes bibliográficos
Autor(a) principal: Fontoura-Andrade, José Luiz
Data de Publicação: 2017
Outros Autores: Amorim, Rivadávio Fernandes Batista de, Sousa, João Batista de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UnB
Texto Completo: http://repositorio.unb.br/handle/10482/30667
http://dx.doi.org/10.1590/s0102-865020170030000010
Resumo: Purpose: to identify the most relevant flaws in standardization in husbandry practices and lack of transparency to report them. This review proposes some measures in order to improve transparency, reproducibility and eventually external validity in experimental surgery experiments with rat model. Methods: we performed a search of scientific articles in PUBMED data base. The survey was conducted from august 2016 to January 2017. The keywords used were "reproducibility", "external validity", "rat model", "rat husbandry", "rat housing", and the time frame was up to January 2017. Articles discarded were the ones which the abstract or the key words did not imply that the authors would discuss any relationship of husbandry and housing with the reproducibility and transparency of reporting animal experiment. Reviews and papers that discussed specifically reproducibility and data reporting transparency were laboriously explored, including references for other articles that could fulfil the inclusion criteria. A total of 246 articles were initially found but only 44 were selected. Results: lack of transparency is the rule and not the exception when reporting results with rat model. This results in poor reproducibility and low external validity with the consequence of considerable loss of time and financial resources. There are still much to be done to improve compliance and adherence of researchers, editors and reviewers to adopt guidelines to mitigate some of the challenges that can impair reproducibility and external validity. Conclusions: authors and reviewers should avoid pitfalls of absent, insufficient or inaccurate description of relevant information the rat model used. This information should be correctly published or reported on another source easily available for readers. Environmental conditions are well known by laboratory animal personnel and are well controlled in housing facilities, but usually neglected in experimental laboratories when the rat model is a novelty for the researcher.
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spelling Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housingReprodutibilidade de resultadosRatosPurpose: to identify the most relevant flaws in standardization in husbandry practices and lack of transparency to report them. This review proposes some measures in order to improve transparency, reproducibility and eventually external validity in experimental surgery experiments with rat model. Methods: we performed a search of scientific articles in PUBMED data base. The survey was conducted from august 2016 to January 2017. The keywords used were "reproducibility", "external validity", "rat model", "rat husbandry", "rat housing", and the time frame was up to January 2017. Articles discarded were the ones which the abstract or the key words did not imply that the authors would discuss any relationship of husbandry and housing with the reproducibility and transparency of reporting animal experiment. Reviews and papers that discussed specifically reproducibility and data reporting transparency were laboriously explored, including references for other articles that could fulfil the inclusion criteria. A total of 246 articles were initially found but only 44 were selected. Results: lack of transparency is the rule and not the exception when reporting results with rat model. This results in poor reproducibility and low external validity with the consequence of considerable loss of time and financial resources. There are still much to be done to improve compliance and adherence of researchers, editors and reviewers to adopt guidelines to mitigate some of the challenges that can impair reproducibility and external validity. Conclusions: authors and reviewers should avoid pitfalls of absent, insufficient or inaccurate description of relevant information the rat model used. This information should be correctly published or reported on another source easily available for readers. Environmental conditions are well known by laboratory animal personnel and are well controlled in housing facilities, but usually neglected in experimental laboratories when the rat model is a novelty for the researcher.Faculdade de Medicina (FMD)Sociedade Brasileira para o Desenvolvimento da Pesquisa em Cirurgia2018-01-04T19:14:20Z2018-01-04T19:14:20Z2017-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfFONTOURA-ANDRADE, José Luiz; AMORIM, Rivadávio Fernandes Batista de; SOUSA, João Batista de. Improving reproducibility and external validity: the role of standardization and data reporting of laboratory rat husbandry and housing. Acta Cirurgica Brasileira, São Paulo, v. 32, n. 3, p. 251-262, mar. 2017. Disponível em: <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-86502017000300251&lng=en&nrm=iso>. Acesso em: 8 fev. 2018. doi: http://dx.doi.org/10.1590/s0102-865020170030000010.http://repositorio.unb.br/handle/10482/30667http://dx.doi.org/10.1590/s0102-865020170030000010Acta Cirurgica Brasileira - This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0). Fonte: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-86502017000300251&lng=en&nrm=iso. Acesso em: 8 fev. 2018.info:eu-repo/semantics/openAccessFontoura-Andrade, José LuizAmorim, Rivadávio Fernandes Batista deSousa, João Batista deengreponame:Repositório Institucional da UnBinstname:Universidade de Brasília (UnB)instacron:UNB2023-08-25T03:10:28Zoai:repositorio.unb.br:10482/30667Repositório InstitucionalPUBhttps://repositorio.unb.br/oai/requestrepositorio@unb.bropendoar:2023-08-25T03:10:28Repositório Institucional da UnB - Universidade de Brasília (UnB)false
dc.title.none.fl_str_mv Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
title Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
spellingShingle Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
Fontoura-Andrade, José Luiz
Reprodutibilidade de resultados
Ratos
title_short Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
title_full Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
title_fullStr Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
title_full_unstemmed Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
title_sort Improving reproducibility and external validity : the role of standardization and data reporting of laboratory rat husbandry and housing
author Fontoura-Andrade, José Luiz
author_facet Fontoura-Andrade, José Luiz
Amorim, Rivadávio Fernandes Batista de
Sousa, João Batista de
author_role author
author2 Amorim, Rivadávio Fernandes Batista de
Sousa, João Batista de
author2_role author
author
dc.contributor.author.fl_str_mv Fontoura-Andrade, José Luiz
Amorim, Rivadávio Fernandes Batista de
Sousa, João Batista de
dc.subject.por.fl_str_mv Reprodutibilidade de resultados
Ratos
topic Reprodutibilidade de resultados
Ratos
description Purpose: to identify the most relevant flaws in standardization in husbandry practices and lack of transparency to report them. This review proposes some measures in order to improve transparency, reproducibility and eventually external validity in experimental surgery experiments with rat model. Methods: we performed a search of scientific articles in PUBMED data base. The survey was conducted from august 2016 to January 2017. The keywords used were "reproducibility", "external validity", "rat model", "rat husbandry", "rat housing", and the time frame was up to January 2017. Articles discarded were the ones which the abstract or the key words did not imply that the authors would discuss any relationship of husbandry and housing with the reproducibility and transparency of reporting animal experiment. Reviews and papers that discussed specifically reproducibility and data reporting transparency were laboriously explored, including references for other articles that could fulfil the inclusion criteria. A total of 246 articles were initially found but only 44 were selected. Results: lack of transparency is the rule and not the exception when reporting results with rat model. This results in poor reproducibility and low external validity with the consequence of considerable loss of time and financial resources. There are still much to be done to improve compliance and adherence of researchers, editors and reviewers to adopt guidelines to mitigate some of the challenges that can impair reproducibility and external validity. Conclusions: authors and reviewers should avoid pitfalls of absent, insufficient or inaccurate description of relevant information the rat model used. This information should be correctly published or reported on another source easily available for readers. Environmental conditions are well known by laboratory animal personnel and are well controlled in housing facilities, but usually neglected in experimental laboratories when the rat model is a novelty for the researcher.
publishDate 2017
dc.date.none.fl_str_mv 2017-03
2018-01-04T19:14:20Z
2018-01-04T19:14:20Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv FONTOURA-ANDRADE, José Luiz; AMORIM, Rivadávio Fernandes Batista de; SOUSA, João Batista de. Improving reproducibility and external validity: the role of standardization and data reporting of laboratory rat husbandry and housing. Acta Cirurgica Brasileira, São Paulo, v. 32, n. 3, p. 251-262, mar. 2017. Disponível em: <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-86502017000300251&lng=en&nrm=iso>. Acesso em: 8 fev. 2018. doi: http://dx.doi.org/10.1590/s0102-865020170030000010.
http://repositorio.unb.br/handle/10482/30667
http://dx.doi.org/10.1590/s0102-865020170030000010
identifier_str_mv FONTOURA-ANDRADE, José Luiz; AMORIM, Rivadávio Fernandes Batista de; SOUSA, João Batista de. Improving reproducibility and external validity: the role of standardization and data reporting of laboratory rat husbandry and housing. Acta Cirurgica Brasileira, São Paulo, v. 32, n. 3, p. 251-262, mar. 2017. Disponível em: <http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-86502017000300251&lng=en&nrm=iso>. Acesso em: 8 fev. 2018. doi: http://dx.doi.org/10.1590/s0102-865020170030000010.
url http://repositorio.unb.br/handle/10482/30667
http://dx.doi.org/10.1590/s0102-865020170030000010
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira para o Desenvolvimento da Pesquisa em Cirurgia
publisher.none.fl_str_mv Sociedade Brasileira para o Desenvolvimento da Pesquisa em Cirurgia
dc.source.none.fl_str_mv reponame:Repositório Institucional da UnB
instname:Universidade de Brasília (UnB)
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instname_str Universidade de Brasília (UnB)
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institution UNB
reponame_str Repositório Institucional da UnB
collection Repositório Institucional da UnB
repository.name.fl_str_mv Repositório Institucional da UnB - Universidade de Brasília (UnB)
repository.mail.fl_str_mv repositorio@unb.br
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