Fungos endofíticos de soja: diversidade e prospecção enzimática

Detalhes bibliográficos
Autor(a) principal: Flores, Andressa Caroline
Data de Publicação: 2022
Tipo de documento: Tese
Idioma: por
Título da fonte: Biblioteca Digital de Teses e Dissertações do UNIOESTE
Texto Completo: https://tede.unioeste.br/handle/tede/6430
Resumo: Plants are inhabited by a microbiota composed of microorganisms in endophytic conditions and each endophyte-plant relation displays peculiar characteristics that vary according to environmental conditions. Studies related to the identification of endophytic populations associated with plant species allow using them as important tools for obtaining biotechnological products of agricultural and industrial interest. The objective of this study was to isolate and identify endophytic fungi from soybean plants, before and after fungicide application composed by Trifloxystrobin + Prothioconazole in the soybean crops, evaluate the sensitivity of the isolates in vitro against the same fungicide and also evaluate them regarding the biotechnological potential of enzyme production. The soybean plants used were cultivated at the Experimental Nucleus of Agricultural Engineering (NEEA) of the Western Paraná State University, in Cascavel, Paraná, Brazil. The leaves of soybean plants were collected at 48 days after sowing (prior to fungicide application) and at 62 days (14 days after application). The fungi were grouped and classified according to morphological and microscopic aspects, identified at the genera level and analyzed according to indexes such colonization frequency (FC%) and ecological diversity (Simpson (D e 1-D), Shannon-Wiener (H’) and Pielou (e). A total of 259 fungi (122 before the fungicide and 137 after the fungicide application) were obtained, which resulted in the identification of 11 genera, among which Diaporthe and Alternaria were the most abundant with FC of 38.6 and 25.5%, respectively. The frequency and diversity values showed that there was no significant difference between the two harvests carried out, revealing that the attainment of cultivable endophytic fungi from plants treated with chemical pesticides was not affected. The fungi were also tested in vitro for sensitivity to the fungicide at concentrations of 0.2, 2.0 and 3.8 mg L-1 . The results showed that all the fungi evaluated were able to grow in the presence of the fungicide in the solid culture medium, in all of the tested concentrations, with low sensitivity at the concentration of 0.2 mg L-1 . Only four fungi showed sensitivity at the concentration of 2.0 mg L-1 and, even at the highest concentration (3.8 mg L -1 ), the genera Cladosporium, Bipolaris, Cadophora, Rhizoctonia and Alternaria remained showing low sensitivity to the fungicide. The isolated fungi also underwent screening in order to detect the production of cellulase enzymes (CMCases), xylanases, proteases and amylases in solid media and quantify the xylanase activity in submerged cultivation, utilizing straw and sugarcane bagasse as substrate. Assays in solid media showed better results for xylanase with an enzyme index (IE) of 2.14 and for CMCase of 1.92. The submerged cultivation generated better results using 50% straw with 50% bagasse and was able to induce an activity of 383.63 U mL-1 of xylanase. Regarding the kinetic behavior of the crude xylanase produced by the fungus Colletrotrichum boninense, the optimal pH value found was 5.0 and the best temperature range was between 50 and 60 °C. At temperatures of 40 and 50 °C the enzyme preserved 87 and 76% of its activity when incubated for 30 min. The Km and VMax values found against xylan were 99.3 mg mL-1 and 3,333 µmol mL-1 min-1 , respectively.
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spelling Sene, LucianeSene, LucianeKadowaki, Marina KimikoGomes, Simone Damascenohttp://lattes.cnpq.br/3362104483832351 Coelho, Silvia Renata MachadoSilvia Renata Machado Coelho http://lattes.cnpq.br/3554106124561773 http://lattes.cnpq.br/8746354350047774Flores, Andressa Caroline2023-02-07T16:59:37Z2022-09-15Flores, Andressa Caroline. Fungos endofíticos de soja: diversidade e prospecção enzimática. 2022. 81 f. Tese( Doutorado em Engenharia Agrícola) - Universidade Estadual do Oeste do Paraná, Cascavel.https://tede.unioeste.br/handle/tede/6430Plants are inhabited by a microbiota composed of microorganisms in endophytic conditions and each endophyte-plant relation displays peculiar characteristics that vary according to environmental conditions. Studies related to the identification of endophytic populations associated with plant species allow using them as important tools for obtaining biotechnological products of agricultural and industrial interest. The objective of this study was to isolate and identify endophytic fungi from soybean plants, before and after fungicide application composed by Trifloxystrobin + Prothioconazole in the soybean crops, evaluate the sensitivity of the isolates in vitro against the same fungicide and also evaluate them regarding the biotechnological potential of enzyme production. The soybean plants used were cultivated at the Experimental Nucleus of Agricultural Engineering (NEEA) of the Western Paraná State University, in Cascavel, Paraná, Brazil. The leaves of soybean plants were collected at 48 days after sowing (prior to fungicide application) and at 62 days (14 days after application). The fungi were grouped and classified according to morphological and microscopic aspects, identified at the genera level and analyzed according to indexes such colonization frequency (FC%) and ecological diversity (Simpson (D e 1-D), Shannon-Wiener (H’) and Pielou (e). A total of 259 fungi (122 before the fungicide and 137 after the fungicide application) were obtained, which resulted in the identification of 11 genera, among which Diaporthe and Alternaria were the most abundant with FC of 38.6 and 25.5%, respectively. The frequency and diversity values showed that there was no significant difference between the two harvests carried out, revealing that the attainment of cultivable endophytic fungi from plants treated with chemical pesticides was not affected. The fungi were also tested in vitro for sensitivity to the fungicide at concentrations of 0.2, 2.0 and 3.8 mg L-1 . The results showed that all the fungi evaluated were able to grow in the presence of the fungicide in the solid culture medium, in all of the tested concentrations, with low sensitivity at the concentration of 0.2 mg L-1 . Only four fungi showed sensitivity at the concentration of 2.0 mg L-1 and, even at the highest concentration (3.8 mg L -1 ), the genera Cladosporium, Bipolaris, Cadophora, Rhizoctonia and Alternaria remained showing low sensitivity to the fungicide. The isolated fungi also underwent screening in order to detect the production of cellulase enzymes (CMCases), xylanases, proteases and amylases in solid media and quantify the xylanase activity in submerged cultivation, utilizing straw and sugarcane bagasse as substrate. Assays in solid media showed better results for xylanase with an enzyme index (IE) of 2.14 and for CMCase of 1.92. The submerged cultivation generated better results using 50% straw with 50% bagasse and was able to induce an activity of 383.63 U mL-1 of xylanase. Regarding the kinetic behavior of the crude xylanase produced by the fungus Colletrotrichum boninense, the optimal pH value found was 5.0 and the best temperature range was between 50 and 60 °C. At temperatures of 40 and 50 °C the enzyme preserved 87 and 76% of its activity when incubated for 30 min. The Km and VMax values found against xylan were 99.3 mg mL-1 and 3,333 µmol mL-1 min-1 , respectively.As plantas são habitadas por uma microbiota composta por microrganismos em condição endofítica e cada relação endófito-planta possui características peculiares e que variam conforme condições ambientais. Estudos relacionados à identificação das populações endofíticas associadas às espécies vegetais permitem utilizá-las como importantes ferramentas para obtenção de produtos biotecnológicos de interesse agrícola e industrial. O objetivo deste estudo foi o de isolar e identificar fungos endofíticos de plantas de soja, antes e após a aplicação do fungicida sistêmico composto por Trifloxistrobina + Protioconazol na lavoura de soja, avaliar a sensibilidade dos isolados in vitro frente ao mesmo fungicida e avaliá-los quanto ao potencial biotecnológico de produção de enzimas. As plantas de soja utilizadas foram cultivadas no Núcleo Experimental de Engenharia Agrícola (NEEA) da Universidade Estadual do Oeste do Paraná, região de Cascavel-PR. Foram coletadas folhas de plantas de soja, com 48 dias após semeadura (anterior à aplicação do fungicida) e com 62 dias (14 dias após a aplicação). Os fungos foram agrupados e classificados conforme aspectos morfológicos e microscópicos, identificados em nível de gênero e analisados de acordo com os índices de frequência de colonização (FC%) e de diversidade ecológica (Simpson (D e 1-D), Shannon-Wiener (H’) e Pielou (e). Um total de 259 fungos (122 antes do fungicida e 137 após aplicação do fungicida) foram obtidos que resultaram na identificação de 11 gêneros, dentre os quais Diaporthe e Alternaria foram os mais abundantes com FC de 38,6 e 25,5%, respectivamente. Os valores de frequência e diversidade demonstraram que não houve diferença significativa entre as duas coletas realizadas, revelando que a obtenção de fungos endofíticos cultiváveis a partir de plantas tratadas com defensivos químicos não foi afetada. Os fungos também foram testados in vitro quanto à sensibilidade ao fungicida nas concentrações de 0,2, 2,0 e 3,8 mg L-1 . Os resultados demonstraram que todos os fungos avaliados foram capazes de crescer na presença do fungicida no meio de cultivo sólido, em todas as concentrações testadas, com baixa sensibilidade na concentração de 0,2 mg L-1 . Somente quatro fungos apresentaram sensibilidade na concentração de 2,0 mg L-1 e, mesmo na maior concentração (3,8 mg L-1 ), os gêneros Cladosporium, Bipolaris, Cadophora, Rhizoctonia e Alternaria permaneceram demonstrando baixa sensibilidade ao fungicida. Os fungos isolados também passaram por triagem para detecção de produção das enzimas celulases (CMCases), xilanases, proteases e amilases em meio sólido e quantificação da atividade de xilanase em cultivo submerso, utilizando palha e bagaço de cana-de-açúcar como substrato. Os ensaios em meio sólido demonstraram melhores resultados para xilanase com índice enzimático (IE) de 2,14 e para CMCase de 1,92. O cultivo submerso gerou melhores resultados utilizando 50% de palha com 50% de bagaço e foi capaz de induzir uma atividade de 383,63 U mL-1 de xilanase. Com relação ao comportamento cinético da xilanase bruta produzida pelo fungo Colletrotrichum boninense, o valor de pH ótimo encontrado foi de 5,0 e melhor faixa de temperatura entre 50 e 60 °C. Nas temperaturas de 40 e 50 °C a enzima preservou 87 e 76% de sua atividade quando incubada por 30 min. Os valores de Km e de VMáx encontrados frente ao xilano foram de 99,3 mg mL-1 e 3.333 µmol mL-1 min-1 , respectivamente.Submitted by Edineia Teixeira (edineia.teixeira@unioeste.br) on 2023-02-07T16:59:36Z No. of bitstreams: 2 Andressa_Flores.2022.pdf: 2369829 bytes, checksum: bcc3f9a3e4822488933024a367def271 (MD5) license_rdf: 0 bytes, checksum: d41d8cd98f00b204e9800998ecf8427e (MD5)Made available in DSpace on 2023-02-07T16:59:37Z (GMT). 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dc.title.por.fl_str_mv Fungos endofíticos de soja: diversidade e prospecção enzimática
dc.title.alternative.eng.fl_str_mv Endophytic fungi from soybean: diversity and enzymatic prospection
title Fungos endofíticos de soja: diversidade e prospecção enzimática
spellingShingle Fungos endofíticos de soja: diversidade e prospecção enzimática
Flores, Andressa Caroline
Endófito
Enzimas
Celulase
Xilanase
Fungicida
Potencial biotecnológico
Endophyte
Enzymes
Cellulase
Xylanase
Fungicide
Biotechnological potential
RECURSOS HÍDRICOS E SANAEAMENTO AMBIENTAL
title_short Fungos endofíticos de soja: diversidade e prospecção enzimática
title_full Fungos endofíticos de soja: diversidade e prospecção enzimática
title_fullStr Fungos endofíticos de soja: diversidade e prospecção enzimática
title_full_unstemmed Fungos endofíticos de soja: diversidade e prospecção enzimática
title_sort Fungos endofíticos de soja: diversidade e prospecção enzimática
author Flores, Andressa Caroline
author_facet Flores, Andressa Caroline
author_role author
dc.contributor.advisor1.fl_str_mv Sene, Luciane
dc.contributor.referee1.fl_str_mv Sene, Luciane
dc.contributor.referee2.fl_str_mv Kadowaki, Marina Kimiko
dc.contributor.referee4.fl_str_mv Gomes, Simone Damasceno
dc.contributor.referee4Lattes.fl_str_mv http://lattes.cnpq.br/3362104483832351 
dc.contributor.referee5.fl_str_mv Coelho, Silvia Renata Machado
dc.contributor.referee5Lattes.fl_str_mv Silvia Renata Machado Coelho http://lattes.cnpq.br/3554106124561773 
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/8746354350047774
dc.contributor.author.fl_str_mv Flores, Andressa Caroline
contributor_str_mv Sene, Luciane
Sene, Luciane
Kadowaki, Marina Kimiko
Gomes, Simone Damasceno
Coelho, Silvia Renata Machado
dc.subject.por.fl_str_mv Endófito
Enzimas
Celulase
Xilanase
Fungicida
Potencial biotecnológico
topic Endófito
Enzimas
Celulase
Xilanase
Fungicida
Potencial biotecnológico
Endophyte
Enzymes
Cellulase
Xylanase
Fungicide
Biotechnological potential
RECURSOS HÍDRICOS E SANAEAMENTO AMBIENTAL
dc.subject.eng.fl_str_mv Endophyte
Enzymes
Cellulase
Xylanase
Fungicide
Biotechnological potential
dc.subject.cnpq.fl_str_mv RECURSOS HÍDRICOS E SANAEAMENTO AMBIENTAL
description Plants are inhabited by a microbiota composed of microorganisms in endophytic conditions and each endophyte-plant relation displays peculiar characteristics that vary according to environmental conditions. Studies related to the identification of endophytic populations associated with plant species allow using them as important tools for obtaining biotechnological products of agricultural and industrial interest. The objective of this study was to isolate and identify endophytic fungi from soybean plants, before and after fungicide application composed by Trifloxystrobin + Prothioconazole in the soybean crops, evaluate the sensitivity of the isolates in vitro against the same fungicide and also evaluate them regarding the biotechnological potential of enzyme production. The soybean plants used were cultivated at the Experimental Nucleus of Agricultural Engineering (NEEA) of the Western Paraná State University, in Cascavel, Paraná, Brazil. The leaves of soybean plants were collected at 48 days after sowing (prior to fungicide application) and at 62 days (14 days after application). The fungi were grouped and classified according to morphological and microscopic aspects, identified at the genera level and analyzed according to indexes such colonization frequency (FC%) and ecological diversity (Simpson (D e 1-D), Shannon-Wiener (H’) and Pielou (e). A total of 259 fungi (122 before the fungicide and 137 after the fungicide application) were obtained, which resulted in the identification of 11 genera, among which Diaporthe and Alternaria were the most abundant with FC of 38.6 and 25.5%, respectively. The frequency and diversity values showed that there was no significant difference between the two harvests carried out, revealing that the attainment of cultivable endophytic fungi from plants treated with chemical pesticides was not affected. The fungi were also tested in vitro for sensitivity to the fungicide at concentrations of 0.2, 2.0 and 3.8 mg L-1 . The results showed that all the fungi evaluated were able to grow in the presence of the fungicide in the solid culture medium, in all of the tested concentrations, with low sensitivity at the concentration of 0.2 mg L-1 . Only four fungi showed sensitivity at the concentration of 2.0 mg L-1 and, even at the highest concentration (3.8 mg L -1 ), the genera Cladosporium, Bipolaris, Cadophora, Rhizoctonia and Alternaria remained showing low sensitivity to the fungicide. The isolated fungi also underwent screening in order to detect the production of cellulase enzymes (CMCases), xylanases, proteases and amylases in solid media and quantify the xylanase activity in submerged cultivation, utilizing straw and sugarcane bagasse as substrate. Assays in solid media showed better results for xylanase with an enzyme index (IE) of 2.14 and for CMCase of 1.92. The submerged cultivation generated better results using 50% straw with 50% bagasse and was able to induce an activity of 383.63 U mL-1 of xylanase. Regarding the kinetic behavior of the crude xylanase produced by the fungus Colletrotrichum boninense, the optimal pH value found was 5.0 and the best temperature range was between 50 and 60 °C. At temperatures of 40 and 50 °C the enzyme preserved 87 and 76% of its activity when incubated for 30 min. The Km and VMax values found against xylan were 99.3 mg mL-1 and 3,333 µmol mL-1 min-1 , respectively.
publishDate 2022
dc.date.issued.fl_str_mv 2022-09-15
dc.date.accessioned.fl_str_mv 2023-02-07T16:59:37Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/doctoralThesis
format doctoralThesis
status_str publishedVersion
dc.identifier.citation.fl_str_mv Flores, Andressa Caroline. Fungos endofíticos de soja: diversidade e prospecção enzimática. 2022. 81 f. Tese( Doutorado em Engenharia Agrícola) - Universidade Estadual do Oeste do Paraná, Cascavel.
dc.identifier.uri.fl_str_mv https://tede.unioeste.br/handle/tede/6430
identifier_str_mv Flores, Andressa Caroline. Fungos endofíticos de soja: diversidade e prospecção enzimática. 2022. 81 f. Tese( Doutorado em Engenharia Agrícola) - Universidade Estadual do Oeste do Paraná, Cascavel.
url https://tede.unioeste.br/handle/tede/6430
dc.language.iso.fl_str_mv por
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