Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Biblioteca Digital de Teses e Dissertações do UNIOESTE |
Texto Completo: | https://tede.unioeste.br/handle/tede/7224 |
Resumo: | Caspase 3 is an enzyme that plays an important role in programmed cell death (apoptosis). Its unbridled activation in neural cells, increasingly studied, is linked to one of the causes of neuron loss in Alzheimer's Disease (AD). Thus, this target is considered a promising target for the development of new drugs. That said, in this work a 2D quantitative structure-activity relationship (QSAR-2D) study was carried out based on 71 compounds described in the literature as caspase 3 inhibitors. The model obtained, using regression by PLS, was approved in terms of internal validation and external, and was used to predict new molecules from a virtual screening study based on 2D and later 3D similarity. After evaluating the toxicity and pharmacokinetic properties, 23 promising compounds were identified as potential caspase 3 inhibitors. These results provide important subsidies for future in vitro studies, aiming at the development of new treatments for AD. The computational approach used in this study demonstrated its effectiveness in identifying compounds with potential biological activity, contributing to optimize the discovery process of new drugs aimed at the treatment of AD. |
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Melo, Eduardo Borges dehttp://lattes.cnpq.br/0732955060928431Melo, Eduardo Borges dehttp://lattes.cnpq.br/0732955060928431Rosa, Maurício Ferreira dahttp://lattes.cnpq.br/3207812515849010Butera, Anna Paolahttp://lattes.cnpq.br/3937524383158746http://lattes.cnpq.br/2798494518054846Santos, Paula Beatriz Jesus2024-05-28T22:30:58Z2023-08-04SANTOS, Paula Beatriz Jesus. Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3. 2023. 60 f. Dissertação (Mestrado em Química) - Universidade Estadual do Oeste do Paraná, Toledo, 2023.https://tede.unioeste.br/handle/tede/7224Caspase 3 is an enzyme that plays an important role in programmed cell death (apoptosis). Its unbridled activation in neural cells, increasingly studied, is linked to one of the causes of neuron loss in Alzheimer's Disease (AD). Thus, this target is considered a promising target for the development of new drugs. That said, in this work a 2D quantitative structure-activity relationship (QSAR-2D) study was carried out based on 71 compounds described in the literature as caspase 3 inhibitors. The model obtained, using regression by PLS, was approved in terms of internal validation and external, and was used to predict new molecules from a virtual screening study based on 2D and later 3D similarity. After evaluating the toxicity and pharmacokinetic properties, 23 promising compounds were identified as potential caspase 3 inhibitors. These results provide important subsidies for future in vitro studies, aiming at the development of new treatments for AD. The computational approach used in this study demonstrated its effectiveness in identifying compounds with potential biological activity, contributing to optimize the discovery process of new drugs aimed at the treatment of AD.A caspase 3 é uma enzima que desempenha importante papel na morte celular programada (apoptose). Sua ativação desenfreada em células neurais, cada vez mais estudada, é atrelada a uma das causas da perda de neurônios na Doença de Alzheimer (DA). Assim, este alvo é considerado um alvo promissor para o desenvolvimento de novos fármacos. Posto isto, nesse trabalho foi realizado um estudo de relação estrutura-atividade quantitativa 2D (QSAR-2D) baseado em 71 compostos descritos na literatura como inibidores da caspase 3. O modelo obtido, utilizando regressão por PLS, foi aprovado nos quesitos de validação interna e externa, e foi utilizado para realizar previsão de novas moléculas oriundas de um estudo de triagem virtual baseado em similaridade 2D e posteriormente em 3D. Após avaliação de toxicidade e propriedades farmacocinéticas, foram identificados 23 compostos promissores como potenciais inibidores da caspase 3. Esses resultados fornecem importantes subsídios para futuros estudos in vitro, visando o desenvolvimento de novos tratamentos para a DA. A abordagem computacional utilizada neste estudo demonstrou sua eficácia na identificação de compostos com potencial atividade biológica, contribuindo para otimizar o processo de descoberta de novos fármacos direcionados ao tratamento da DA.Submitted by Marilene Donadel (marilene.donadel@unioeste.br) on 2024-05-28T22:30:58Z No. of bitstreams: 1 Paula_Santos_2023.pdf: 2263598 bytes, checksum: 40c36838dc50834e6093c0ec8ea3e4a4 (MD5)Made available in DSpace on 2024-05-28T22:30:58Z (GMT). No. of bitstreams: 1 Paula_Santos_2023.pdf: 2263598 bytes, checksum: 40c36838dc50834e6093c0ec8ea3e4a4 (MD5) Previous issue date: 2023-08-04application/pdfpor-2624803687637593200500Universidade Estadual do Oeste do ParanáToledoPrograma de Pós-Graduação em QuímicaUNIOESTEBrasilCentro de Engenharias e Ciências Exatashttp://creativecommons.org/licenses/by-nc-nd/4.0/info:eu-repo/semantics/openAccessRelação estrutura-atividade quantitativaCaspase 3Doença de Alzheimer (DA).Quantitative structure-activity relationshipAlzheimer's Disease (AD).CIENCIAS EXATAS E DA TERRA::QUIMICADoença de alzheimer: estudos in silico de inibidores da proteina caspase 3Alzheimer's disease: in silico studies of caspase 3 protein inhibitorsinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis1435648362225100898600600600-77344021240821469221571700325303117195reponame:Biblioteca Digital de Teses e Dissertações do UNIOESTEinstname:Universidade Estadual do Oeste do Paraná (UNIOESTE)instacron:UNIOESTEORIGINALPaula_Santos_2023.pdfPaula_Santos_2023.pdfapplication/pdf2263598http://tede.unioeste.br:8080/tede/bitstream/tede/7224/2/Paula_Santos_2023.pdf40c36838dc50834e6093c0ec8ea3e4a4MD52LICENSElicense.txtlicense.txttext/plain; charset=utf-82165http://tede.unioeste.br:8080/tede/bitstream/tede/7224/1/license.txtbd3efa91386c1718a7f26a329fdcb468MD51tede/72242024-05-28 19:30:58.663oai:tede.unioeste.br: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Biblioteca Digital de Teses e Dissertaçõeshttp://tede.unioeste.br/PUBhttp://tede.unioeste.br/oai/requestbiblioteca.repositorio@unioeste.bropendoar:2024-05-28T22:30:58Biblioteca Digital de Teses e Dissertações do UNIOESTE - Universidade Estadual do Oeste do Paraná (UNIOESTE)false |
dc.title.por.fl_str_mv |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
dc.title.alternative.eng.fl_str_mv |
Alzheimer's disease: in silico studies of caspase 3 protein inhibitors |
title |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
spellingShingle |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 Santos, Paula Beatriz Jesus Relação estrutura-atividade quantitativa Caspase 3 Doença de Alzheimer (DA). Quantitative structure-activity relationship Alzheimer's Disease (AD). CIENCIAS EXATAS E DA TERRA::QUIMICA |
title_short |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
title_full |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
title_fullStr |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
title_full_unstemmed |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
title_sort |
Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3 |
author |
Santos, Paula Beatriz Jesus |
author_facet |
Santos, Paula Beatriz Jesus |
author_role |
author |
dc.contributor.advisor1.fl_str_mv |
Melo, Eduardo Borges de |
dc.contributor.advisor1Lattes.fl_str_mv |
http://lattes.cnpq.br/0732955060928431 |
dc.contributor.referee1.fl_str_mv |
Melo, Eduardo Borges de |
dc.contributor.referee1Lattes.fl_str_mv |
http://lattes.cnpq.br/0732955060928431 |
dc.contributor.referee2.fl_str_mv |
Rosa, Maurício Ferreira da |
dc.contributor.referee2Lattes.fl_str_mv |
http://lattes.cnpq.br/3207812515849010 |
dc.contributor.referee3.fl_str_mv |
Butera, Anna Paola |
dc.contributor.referee3Lattes.fl_str_mv |
http://lattes.cnpq.br/3937524383158746 |
dc.contributor.authorLattes.fl_str_mv |
http://lattes.cnpq.br/2798494518054846 |
dc.contributor.author.fl_str_mv |
Santos, Paula Beatriz Jesus |
contributor_str_mv |
Melo, Eduardo Borges de Melo, Eduardo Borges de Rosa, Maurício Ferreira da Butera, Anna Paola |
dc.subject.por.fl_str_mv |
Relação estrutura-atividade quantitativa Caspase 3 Doença de Alzheimer (DA). |
topic |
Relação estrutura-atividade quantitativa Caspase 3 Doença de Alzheimer (DA). Quantitative structure-activity relationship Alzheimer's Disease (AD). CIENCIAS EXATAS E DA TERRA::QUIMICA |
dc.subject.eng.fl_str_mv |
Quantitative structure-activity relationship Alzheimer's Disease (AD). |
dc.subject.cnpq.fl_str_mv |
CIENCIAS EXATAS E DA TERRA::QUIMICA |
description |
Caspase 3 is an enzyme that plays an important role in programmed cell death (apoptosis). Its unbridled activation in neural cells, increasingly studied, is linked to one of the causes of neuron loss in Alzheimer's Disease (AD). Thus, this target is considered a promising target for the development of new drugs. That said, in this work a 2D quantitative structure-activity relationship (QSAR-2D) study was carried out based on 71 compounds described in the literature as caspase 3 inhibitors. The model obtained, using regression by PLS, was approved in terms of internal validation and external, and was used to predict new molecules from a virtual screening study based on 2D and later 3D similarity. After evaluating the toxicity and pharmacokinetic properties, 23 promising compounds were identified as potential caspase 3 inhibitors. These results provide important subsidies for future in vitro studies, aiming at the development of new treatments for AD. The computational approach used in this study demonstrated its effectiveness in identifying compounds with potential biological activity, contributing to optimize the discovery process of new drugs aimed at the treatment of AD. |
publishDate |
2023 |
dc.date.issued.fl_str_mv |
2023-08-04 |
dc.date.accessioned.fl_str_mv |
2024-05-28T22:30:58Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/masterThesis |
format |
masterThesis |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
SANTOS, Paula Beatriz Jesus. Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3. 2023. 60 f. Dissertação (Mestrado em Química) - Universidade Estadual do Oeste do Paraná, Toledo, 2023. |
dc.identifier.uri.fl_str_mv |
https://tede.unioeste.br/handle/tede/7224 |
identifier_str_mv |
SANTOS, Paula Beatriz Jesus. Doença de alzheimer: estudos in silico de inibidores da proteina caspase 3. 2023. 60 f. Dissertação (Mestrado em Química) - Universidade Estadual do Oeste do Paraná, Toledo, 2023. |
url |
https://tede.unioeste.br/handle/tede/7224 |
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por |
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1571700325303117195 |
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http://creativecommons.org/licenses/by-nc-nd/4.0/ info:eu-repo/semantics/openAccess |
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http://creativecommons.org/licenses/by-nc-nd/4.0/ |
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openAccess |
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Universidade Estadual do Oeste do Paraná Toledo |
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Programa de Pós-Graduação em Química |
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UNIOESTE |
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Brasil |
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Centro de Engenharias e Ciências Exatas |
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Universidade Estadual do Oeste do Paraná Toledo |
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