Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato

Detalhes bibliográficos
Autor(a) principal: Quintero, Fabíola OCampo [UNESP]
Data de Publicação: 2018
Outros Autores: Pinto, Layra G. [UNESP], Barsalobres-Cavallari, Carla F. [UNESP], Arcuri, Mariana de Lara Campos [UNESP], Pino, Lilian Ellen, Peres, Lázaro Eustáquio Pereira, Maluf, Mirian P., Maia, Ivan G. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s00299-018-2310-9
http://hdl.handle.net/11449/179952
Resumo: Key message: A seed maturation protein gene (CaSMP) from Coffea arabica is expressed in the endosperm of yellow/green fruits. The CaSMP promoter drives reporter expression in the seeds of immature tomato fruits. Abstract: In this report, an expressed sequence tag-based approach was used to identify a seed-specific candidate gene for promoter isolation in Coffea arabica. The tissue-specific expression of the cognate gene (CaSMP), which encodes a yet uncharacterized coffee seed maturation protein, was validated by RT-qPCR. Additional expression analysis during coffee fruit development revealed higher levels of CaSMP transcript accumulation in the yellow/green phenological stage. Moreover, CaSMP was preferentially expressed in the endosperm and was down-regulated during water imbibition of the seeds. The presence of regulatory cis-elements known to be involved in seed- and endosperm-specific expression was observed in the CaSMP 5′-upstream region amplified by genome walking (GW). Additional histochemical analysis of transgenic tomato (cv. Micro-Tom) lines harboring the GW-amplified fragment (~ 1.4 kb) fused to uidA reporter gene confirmed promoter activity in the ovule of immature tomato fruits, while no activity was observed in the seeds of ripening fruits and in the other organs/tissues examined. These results indicate that the CaSMP promoter can be used to drive transgene expression in coffee beans and tomato seeds, thus representing a promising biotechnological tool.
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spelling Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomatoCoffeePromoterSeed maturation proteinSeed-specific expressionTomatoKey message: A seed maturation protein gene (CaSMP) from Coffea arabica is expressed in the endosperm of yellow/green fruits. The CaSMP promoter drives reporter expression in the seeds of immature tomato fruits. Abstract: In this report, an expressed sequence tag-based approach was used to identify a seed-specific candidate gene for promoter isolation in Coffea arabica. The tissue-specific expression of the cognate gene (CaSMP), which encodes a yet uncharacterized coffee seed maturation protein, was validated by RT-qPCR. Additional expression analysis during coffee fruit development revealed higher levels of CaSMP transcript accumulation in the yellow/green phenological stage. Moreover, CaSMP was preferentially expressed in the endosperm and was down-regulated during water imbibition of the seeds. The presence of regulatory cis-elements known to be involved in seed- and endosperm-specific expression was observed in the CaSMP 5′-upstream region amplified by genome walking (GW). Additional histochemical analysis of transgenic tomato (cv. Micro-Tom) lines harboring the GW-amplified fragment (~ 1.4 kb) fused to uidA reporter gene confirmed promoter activity in the ovule of immature tomato fruits, while no activity was observed in the seeds of ripening fruits and in the other organs/tissues examined. These results indicate that the CaSMP promoter can be used to drive transgene expression in coffee beans and tomato seeds, thus representing a promising biotechnological tool.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Department of Genetics Institute of Biosciences Sao Paulo State University (UNESP)Department of Biological Sciences (LCB) Escola Superior de Agricultura “Luiz de Queiroz” (ESALQ) University of Sao Paulo (USP)Embrapa Coffee and Coffee Center Alcides Carvalho Agronomic Institute of CampinasDepartment of Genetics Institute of Biosciences Sao Paulo State University (UNESP)FAPESP: 2009/54361-9Universidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Quintero, Fabíola OCampo [UNESP]Pinto, Layra G. [UNESP]Barsalobres-Cavallari, Carla F. [UNESP]Arcuri, Mariana de Lara Campos [UNESP]Pino, Lilian EllenPeres, Lázaro Eustáquio PereiraMaluf, Mirian P.Maia, Ivan G. [UNESP]2018-12-11T17:37:26Z2018-12-11T17:37:26Z2018-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1257-1268application/pdfhttp://dx.doi.org/10.1007/s00299-018-2310-9Plant Cell Reports, v. 37, n. 9, p. 1257-1268, 2018.0721-7714http://hdl.handle.net/11449/17995210.1007/s00299-018-2310-92-s2.0-850485027372-s2.0-85048502737.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPlant Cell Reports1,291info:eu-repo/semantics/openAccess2023-12-21T06:23:02Zoai:repositorio.unesp.br:11449/179952Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-12-21T06:23:02Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
title Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
spellingShingle Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
Quintero, Fabíola OCampo [UNESP]
Coffee
Promoter
Seed maturation protein
Seed-specific expression
Tomato
title_short Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
title_full Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
title_fullStr Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
title_full_unstemmed Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
title_sort Identification of a seed maturation protein gene from Coffea arabica (CaSMP) and analysis of its promoter activity in tomato
author Quintero, Fabíola OCampo [UNESP]
author_facet Quintero, Fabíola OCampo [UNESP]
Pinto, Layra G. [UNESP]
Barsalobres-Cavallari, Carla F. [UNESP]
Arcuri, Mariana de Lara Campos [UNESP]
Pino, Lilian Ellen
Peres, Lázaro Eustáquio Pereira
Maluf, Mirian P.
Maia, Ivan G. [UNESP]
author_role author
author2 Pinto, Layra G. [UNESP]
Barsalobres-Cavallari, Carla F. [UNESP]
Arcuri, Mariana de Lara Campos [UNESP]
Pino, Lilian Ellen
Peres, Lázaro Eustáquio Pereira
Maluf, Mirian P.
Maia, Ivan G. [UNESP]
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade de São Paulo (USP)
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
dc.contributor.author.fl_str_mv Quintero, Fabíola OCampo [UNESP]
Pinto, Layra G. [UNESP]
Barsalobres-Cavallari, Carla F. [UNESP]
Arcuri, Mariana de Lara Campos [UNESP]
Pino, Lilian Ellen
Peres, Lázaro Eustáquio Pereira
Maluf, Mirian P.
Maia, Ivan G. [UNESP]
dc.subject.por.fl_str_mv Coffee
Promoter
Seed maturation protein
Seed-specific expression
Tomato
topic Coffee
Promoter
Seed maturation protein
Seed-specific expression
Tomato
description Key message: A seed maturation protein gene (CaSMP) from Coffea arabica is expressed in the endosperm of yellow/green fruits. The CaSMP promoter drives reporter expression in the seeds of immature tomato fruits. Abstract: In this report, an expressed sequence tag-based approach was used to identify a seed-specific candidate gene for promoter isolation in Coffea arabica. The tissue-specific expression of the cognate gene (CaSMP), which encodes a yet uncharacterized coffee seed maturation protein, was validated by RT-qPCR. Additional expression analysis during coffee fruit development revealed higher levels of CaSMP transcript accumulation in the yellow/green phenological stage. Moreover, CaSMP was preferentially expressed in the endosperm and was down-regulated during water imbibition of the seeds. The presence of regulatory cis-elements known to be involved in seed- and endosperm-specific expression was observed in the CaSMP 5′-upstream region amplified by genome walking (GW). Additional histochemical analysis of transgenic tomato (cv. Micro-Tom) lines harboring the GW-amplified fragment (~ 1.4 kb) fused to uidA reporter gene confirmed promoter activity in the ovule of immature tomato fruits, while no activity was observed in the seeds of ripening fruits and in the other organs/tissues examined. These results indicate that the CaSMP promoter can be used to drive transgene expression in coffee beans and tomato seeds, thus representing a promising biotechnological tool.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-11T17:37:26Z
2018-12-11T17:37:26Z
2018-09-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s00299-018-2310-9
Plant Cell Reports, v. 37, n. 9, p. 1257-1268, 2018.
0721-7714
http://hdl.handle.net/11449/179952
10.1007/s00299-018-2310-9
2-s2.0-85048502737
2-s2.0-85048502737.pdf
url http://dx.doi.org/10.1007/s00299-018-2310-9
http://hdl.handle.net/11449/179952
identifier_str_mv Plant Cell Reports, v. 37, n. 9, p. 1257-1268, 2018.
0721-7714
10.1007/s00299-018-2310-9
2-s2.0-85048502737
2-s2.0-85048502737.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Plant Cell Reports
1,291
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1257-1268
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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