Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.7717/peerj.8320 http://hdl.handle.net/11449/198434 |
Resumo: | This study evaluated the transcriptional profile of genes related to nitrogen (N) assimilation in coffee plants susceptible and resistant to rust fungi under N sufficiency and N suppression. For this purpose, we inoculated young coffee leaves with Hemileia vastatrix uredospores and collected them at 0, 12, 24 and 48 hours post-inoculation (HPI) to evaluate the relative expressions of genes encoding cytosolic glutamine synthetase (CaGS1), plastid glutamine synthetase (CaGS2), nitrate reductase (CaNR), and asparagine synthetase (CaAS). The genes exhibited distinct patterns of transcriptional modulation for the different genotypes and N nutritional regimes. The resistant genotype (I59) presented high levels of transcription in response to pathogen inoculation for CaNR and CaGS1 genes, evaluated under N sufficiency in the initial moments of infection (12 HPI). The gene CaGS1 also showed a peak at 48 HPI. The susceptible genotype (CV99) showed increased transcript rates of CaNR at 12 and 24 HPI in response to rust inoculation. The transcriptional patterns observed for CV99, under N suppression, were high levels for CaAS and CaGS2 at all post-inoculation times in response to coffee leaf rust disease. In addition, CaGS1 was up-regulated at 48 HPI for CV99. Cultivar I59 showed high transcript levels at 12 HPI for CaAS and peaks at 24 and 48 HPI for CaGS2 in inoculated samples. Consequently, total chlorophyl concentration was influenced by N suppression and by rust infection. Regarding enzyme activities in vitro for glutamine synthetase and CaNR, there was an increase in infected coffee leaves (I59) and under N sufficiency. Moreover, CV99 was modulated in both N nutritional regimes for GS activity in response to rust. Our results indicate that N transport genes trigger a differential modulation between genotypes through the action of rust disease. |
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Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rustGene expressionGenotypic responseHemileia vastatrixMineral nutritionN assimilationRT-qPCRThis study evaluated the transcriptional profile of genes related to nitrogen (N) assimilation in coffee plants susceptible and resistant to rust fungi under N sufficiency and N suppression. For this purpose, we inoculated young coffee leaves with Hemileia vastatrix uredospores and collected them at 0, 12, 24 and 48 hours post-inoculation (HPI) to evaluate the relative expressions of genes encoding cytosolic glutamine synthetase (CaGS1), plastid glutamine synthetase (CaGS2), nitrate reductase (CaNR), and asparagine synthetase (CaAS). The genes exhibited distinct patterns of transcriptional modulation for the different genotypes and N nutritional regimes. The resistant genotype (I59) presented high levels of transcription in response to pathogen inoculation for CaNR and CaGS1 genes, evaluated under N sufficiency in the initial moments of infection (12 HPI). The gene CaGS1 also showed a peak at 48 HPI. The susceptible genotype (CV99) showed increased transcript rates of CaNR at 12 and 24 HPI in response to rust inoculation. The transcriptional patterns observed for CV99, under N suppression, were high levels for CaAS and CaGS2 at all post-inoculation times in response to coffee leaf rust disease. In addition, CaGS1 was up-regulated at 48 HPI for CV99. Cultivar I59 showed high transcript levels at 12 HPI for CaAS and peaks at 24 and 48 HPI for CaGS2 in inoculated samples. Consequently, total chlorophyl concentration was influenced by N suppression and by rust infection. Regarding enzyme activities in vitro for glutamine synthetase and CaNR, there was an increase in infected coffee leaves (I59) and under N sufficiency. Moreover, CV99 was modulated in both N nutritional regimes for GS activity in response to rust. Our results indicate that N transport genes trigger a differential modulation between genotypes through the action of rust disease.Department of Agronomy Universidade Estadual de LondrinaPlant Biotechnology Laboratory Instituto Agronômico Do ParanáCentro de Analise e Pesquisa Tecnologica Do Agronegocio Do Cafe 'Alcides Carvalho' Instituto Agronômico de CampinasPrograma de Pós-Graduação em Agronomia Universidade Do Oeste PaulistaPlant Biotechnology LaboratoryDepartment of Botany Instituto de Biociências São Paulo State University UNESPPlant BreedingDepartment of Agronomy Universidade ParanaenseDepartment of Botany Instituto de Biociências São Paulo State University UNESPUniversidade Estadual de Londrina (UEL)Instituto Agronômico Do ParanáInstituto Agronômico de CampinasUniversidade Do Oeste PaulistaEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Universidade Estadual Paulista (Unesp)Universidade ParanaenseBaba, Viviane YumiBraghini, Masako TomaDos Santos, Tiago BeneditoDe Carvalho, KeniaSoares, João Danillo MouraIvamoto-Suzuki, Suzana Tiemi [UNESP]Maluf, Mirian P.Padilha, LilianPaccola-Meirelles, Luzia D.Pereira, Luiz FilipeDomingues, Douglas S. [UNESP]2020-12-12T01:12:49Z2020-12-12T01:12:49Z2020-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.7717/peerj.8320PeerJ, v. 2020, n. 1, 2020.2167-8359http://hdl.handle.net/11449/19843410.7717/peerj.83202-s2.0-85078313772Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPeerJinfo:eu-repo/semantics/openAccess2021-10-23T11:43:39Zoai:repositorio.unesp.br:11449/198434Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T17:10:50.724870Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
title |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
spellingShingle |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust Baba, Viviane Yumi Gene expression Genotypic response Hemileia vastatrix Mineral nutrition N assimilation RT-qPCR |
title_short |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
title_full |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
title_fullStr |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
title_full_unstemmed |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
title_sort |
Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust |
author |
Baba, Viviane Yumi |
author_facet |
Baba, Viviane Yumi Braghini, Masako Toma Dos Santos, Tiago Benedito De Carvalho, Kenia Soares, João Danillo Moura Ivamoto-Suzuki, Suzana Tiemi [UNESP] Maluf, Mirian P. Padilha, Lilian Paccola-Meirelles, Luzia D. Pereira, Luiz Filipe Domingues, Douglas S. [UNESP] |
author_role |
author |
author2 |
Braghini, Masako Toma Dos Santos, Tiago Benedito De Carvalho, Kenia Soares, João Danillo Moura Ivamoto-Suzuki, Suzana Tiemi [UNESP] Maluf, Mirian P. Padilha, Lilian Paccola-Meirelles, Luzia D. Pereira, Luiz Filipe Domingues, Douglas S. [UNESP] |
author2_role |
author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual de Londrina (UEL) Instituto Agronômico Do Paraná Instituto Agronômico de Campinas Universidade Do Oeste Paulista Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) Universidade Estadual Paulista (Unesp) Universidade Paranaense |
dc.contributor.author.fl_str_mv |
Baba, Viviane Yumi Braghini, Masako Toma Dos Santos, Tiago Benedito De Carvalho, Kenia Soares, João Danillo Moura Ivamoto-Suzuki, Suzana Tiemi [UNESP] Maluf, Mirian P. Padilha, Lilian Paccola-Meirelles, Luzia D. Pereira, Luiz Filipe Domingues, Douglas S. [UNESP] |
dc.subject.por.fl_str_mv |
Gene expression Genotypic response Hemileia vastatrix Mineral nutrition N assimilation RT-qPCR |
topic |
Gene expression Genotypic response Hemileia vastatrix Mineral nutrition N assimilation RT-qPCR |
description |
This study evaluated the transcriptional profile of genes related to nitrogen (N) assimilation in coffee plants susceptible and resistant to rust fungi under N sufficiency and N suppression. For this purpose, we inoculated young coffee leaves with Hemileia vastatrix uredospores and collected them at 0, 12, 24 and 48 hours post-inoculation (HPI) to evaluate the relative expressions of genes encoding cytosolic glutamine synthetase (CaGS1), plastid glutamine synthetase (CaGS2), nitrate reductase (CaNR), and asparagine synthetase (CaAS). The genes exhibited distinct patterns of transcriptional modulation for the different genotypes and N nutritional regimes. The resistant genotype (I59) presented high levels of transcription in response to pathogen inoculation for CaNR and CaGS1 genes, evaluated under N sufficiency in the initial moments of infection (12 HPI). The gene CaGS1 also showed a peak at 48 HPI. The susceptible genotype (CV99) showed increased transcript rates of CaNR at 12 and 24 HPI in response to rust inoculation. The transcriptional patterns observed for CV99, under N suppression, were high levels for CaAS and CaGS2 at all post-inoculation times in response to coffee leaf rust disease. In addition, CaGS1 was up-regulated at 48 HPI for CV99. Cultivar I59 showed high transcript levels at 12 HPI for CaAS and peaks at 24 and 48 HPI for CaGS2 in inoculated samples. Consequently, total chlorophyl concentration was influenced by N suppression and by rust infection. Regarding enzyme activities in vitro for glutamine synthetase and CaNR, there was an increase in infected coffee leaves (I59) and under N sufficiency. Moreover, CV99 was modulated in both N nutritional regimes for GS activity in response to rust. Our results indicate that N transport genes trigger a differential modulation between genotypes through the action of rust disease. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-12T01:12:49Z 2020-12-12T01:12:49Z 2020-01-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.7717/peerj.8320 PeerJ, v. 2020, n. 1, 2020. 2167-8359 http://hdl.handle.net/11449/198434 10.7717/peerj.8320 2-s2.0-85078313772 |
url |
http://dx.doi.org/10.7717/peerj.8320 http://hdl.handle.net/11449/198434 |
identifier_str_mv |
PeerJ, v. 2020, n. 1, 2020. 2167-8359 10.7717/peerj.8320 2-s2.0-85078313772 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
PeerJ |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128766979866624 |