Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection

Detalhes bibliográficos
Autor(a) principal: Ribeiro, José Wagner [UNESP]
Data de Publicação: 2020
Outros Autores: Siqueira, Tadeu [UNESP], DiRenzo, Graziella V., Lambertini, Carolina, Lyra, Mariana L. [UNESP], Toledo, Luís Felipe, Haddad, Célio F. B. [UNESP], Becker, C. Guilherme
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s00442-020-04646-4
http://hdl.handle.net/11449/200355
Resumo: Ecologists studying emerging wildlife diseases need to confront the realism of imperfect pathogen detection across heterogeneous habitats to aid in conservation decisions. For example, spatial risk assessments of amphibian disease caused by Batrachochytrium dendrobatidis (Bd) has largely ignored imperfect pathogen detection across sampling sites. Because changes in pathogenicity and host susceptibility could trigger recurrent population declines, it is imperative to understand how pathogen prevalence and occupancy vary across environmental gradients. Here, we assessed how Bd occurrence, prevalence, and infection intensity in a diverse Neotropical landscape vary across streams in relation to abiotic and biotic predictors using a hierarchical Bayesian model that accounts for imperfect Bd detection caused by qPCR error. Our model indicated that the number of streams harboring Bd-infected frogs is higher than observed, with Bd likely being present at ~ 43% more streams than it was detected. We found that terrestrial-breeders captured along streams had higher Bd prevalence, but lower infection intensity, than aquatic-breeding species. We found a positive relationship between Bd occupancy probability and stream density, and a negative relationship between Bd occupancy probability and amphibian local richness. Forest cover was a weak predictor of Bd occurrence and infection intensity. Finally, we provide estimates for the minimum number of amphibian captures needed to determine the presence of Bd at a given site where Bd occurs, thus, providing guidence for cost-effective disease risk monitoring programs.
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spelling Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detectionAmphibian diseaseAtlantic forestBatrachochytrium dendrobatidisBayesian hierarchical modelTropical streamsEcologists studying emerging wildlife diseases need to confront the realism of imperfect pathogen detection across heterogeneous habitats to aid in conservation decisions. For example, spatial risk assessments of amphibian disease caused by Batrachochytrium dendrobatidis (Bd) has largely ignored imperfect pathogen detection across sampling sites. Because changes in pathogenicity and host susceptibility could trigger recurrent population declines, it is imperative to understand how pathogen prevalence and occupancy vary across environmental gradients. Here, we assessed how Bd occurrence, prevalence, and infection intensity in a diverse Neotropical landscape vary across streams in relation to abiotic and biotic predictors using a hierarchical Bayesian model that accounts for imperfect Bd detection caused by qPCR error. Our model indicated that the number of streams harboring Bd-infected frogs is higher than observed, with Bd likely being present at ~ 43% more streams than it was detected. We found that terrestrial-breeders captured along streams had higher Bd prevalence, but lower infection intensity, than aquatic-breeding species. We found a positive relationship between Bd occupancy probability and stream density, and a negative relationship between Bd occupancy probability and amphibian local richness. Forest cover was a weak predictor of Bd occurrence and infection intensity. Finally, we provide estimates for the minimum number of amphibian captures needed to determine the presence of Bd at a given site where Bd occurs, thus, providing guidence for cost-effective disease risk monitoring programs.National Science FoundationRufford FoundationFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Instituto de Biociências Universidade Estadual Paulista (Unesp), Av. 24A 1515Department of Ecology Evolution and Marine Biology University of CaliforniaLaboratório de História Natural de Anfíbios Brasileiros (LaHNAB) Departamento de Biologia Animal Instituto de Biologia Universidade Estadual de CampinasDepartamento de Biodiversidade e Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista (Unesp)Department of Biological Sciences The University of AlabamaInstituto de Biociências Universidade Estadual Paulista (Unesp), Av. 24A 1515Departamento de Biodiversidade e Centro de Aquicultura (CAUNESP) Instituto de Biociências Universidade Estadual Paulista (Unesp)National Science Foundation: 1611692Rufford Foundation: 16419-1FAPESP: 2013/50424-1FAPESP: 2014/07113-8FAPESP: 2016/07469-2FAPESP: 2016/25358-3CNPq: 300896/2016-6Universidade Estadual Paulista (Unesp)University of CaliforniaUniversidade Estadual de Campinas (UNICAMP)The University of AlabamaRibeiro, José Wagner [UNESP]Siqueira, Tadeu [UNESP]DiRenzo, Graziella V.Lambertini, CarolinaLyra, Mariana L. [UNESP]Toledo, Luís FelipeHaddad, Célio F. B. [UNESP]Becker, C. Guilherme2020-12-12T02:04:27Z2020-12-12T02:04:27Z2020-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article237-248http://dx.doi.org/10.1007/s00442-020-04646-4Oecologia, v. 193, n. 1, p. 237-248, 2020.1432-19390029-8549http://hdl.handle.net/11449/20035510.1007/s00442-020-04646-42-s2.0-85084067659Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengOecologiainfo:eu-repo/semantics/openAccess2024-04-09T15:29:47Zoai:repositorio.unesp.br:11449/200355Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-04-09T15:29:47Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
title Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
spellingShingle Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
Ribeiro, José Wagner [UNESP]
Amphibian disease
Atlantic forest
Batrachochytrium dendrobatidis
Bayesian hierarchical model
Tropical streams
title_short Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
title_full Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
title_fullStr Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
title_full_unstemmed Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
title_sort Assessing amphibian disease risk across tropical streams while accounting for imperfect pathogen detection
author Ribeiro, José Wagner [UNESP]
author_facet Ribeiro, José Wagner [UNESP]
Siqueira, Tadeu [UNESP]
DiRenzo, Graziella V.
Lambertini, Carolina
Lyra, Mariana L. [UNESP]
Toledo, Luís Felipe
Haddad, Célio F. B. [UNESP]
Becker, C. Guilherme
author_role author
author2 Siqueira, Tadeu [UNESP]
DiRenzo, Graziella V.
Lambertini, Carolina
Lyra, Mariana L. [UNESP]
Toledo, Luís Felipe
Haddad, Célio F. B. [UNESP]
Becker, C. Guilherme
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
University of California
Universidade Estadual de Campinas (UNICAMP)
The University of Alabama
dc.contributor.author.fl_str_mv Ribeiro, José Wagner [UNESP]
Siqueira, Tadeu [UNESP]
DiRenzo, Graziella V.
Lambertini, Carolina
Lyra, Mariana L. [UNESP]
Toledo, Luís Felipe
Haddad, Célio F. B. [UNESP]
Becker, C. Guilherme
dc.subject.por.fl_str_mv Amphibian disease
Atlantic forest
Batrachochytrium dendrobatidis
Bayesian hierarchical model
Tropical streams
topic Amphibian disease
Atlantic forest
Batrachochytrium dendrobatidis
Bayesian hierarchical model
Tropical streams
description Ecologists studying emerging wildlife diseases need to confront the realism of imperfect pathogen detection across heterogeneous habitats to aid in conservation decisions. For example, spatial risk assessments of amphibian disease caused by Batrachochytrium dendrobatidis (Bd) has largely ignored imperfect pathogen detection across sampling sites. Because changes in pathogenicity and host susceptibility could trigger recurrent population declines, it is imperative to understand how pathogen prevalence and occupancy vary across environmental gradients. Here, we assessed how Bd occurrence, prevalence, and infection intensity in a diverse Neotropical landscape vary across streams in relation to abiotic and biotic predictors using a hierarchical Bayesian model that accounts for imperfect Bd detection caused by qPCR error. Our model indicated that the number of streams harboring Bd-infected frogs is higher than observed, with Bd likely being present at ~ 43% more streams than it was detected. We found that terrestrial-breeders captured along streams had higher Bd prevalence, but lower infection intensity, than aquatic-breeding species. We found a positive relationship between Bd occupancy probability and stream density, and a negative relationship between Bd occupancy probability and amphibian local richness. Forest cover was a weak predictor of Bd occurrence and infection intensity. Finally, we provide estimates for the minimum number of amphibian captures needed to determine the presence of Bd at a given site where Bd occurs, thus, providing guidence for cost-effective disease risk monitoring programs.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T02:04:27Z
2020-12-12T02:04:27Z
2020-05-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s00442-020-04646-4
Oecologia, v. 193, n. 1, p. 237-248, 2020.
1432-1939
0029-8549
http://hdl.handle.net/11449/200355
10.1007/s00442-020-04646-4
2-s2.0-85084067659
url http://dx.doi.org/10.1007/s00442-020-04646-4
http://hdl.handle.net/11449/200355
identifier_str_mv Oecologia, v. 193, n. 1, p. 237-248, 2020.
1432-1939
0029-8549
10.1007/s00442-020-04646-4
2-s2.0-85084067659
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Oecologia
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 237-248
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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