Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni

Detalhes bibliográficos
Autor(a) principal: He, Tuo
Data de Publicação: 2020
Outros Autores: Marco, Joao, Soares, Richard, Yin, Yafang, Wiedenhoeft, Alex C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/f11010036
http://hdl.handle.net/11449/195195
Resumo: Illegal logging and associated trade aggravate the over-exploitation of Swietenia species, of which S. macrophylla King, S. mahagoni (L.) Jacq, and S. humilis Zucc. have been listed in Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) Appendix II. Implementation of CITES necessitates the development of efficient forensic tools to identify wood species accurately, and ideally ones readily deployable in wood anatomy laboratories across the world. Herein, a method using quantitative wood anatomy data in combination with machine learning models to discriminate between three Swietenia species is presented, in addition to a second model focusing only on the two historically more important species S. mahagoni and S. macrophylla. The intra-and inter-specific variations in nine quantitative wood anatomical characters were measured and calculated based on 278 wood specimens, and four machine learning classifiers-Decision Tree C5.0, Naive Bayes (NB), Support Vector Machine (SVM), and Artificial Neural Network (ANN)-were used to discriminate between the species. Among these species, S. macrophylla exhibited the largest intraspecific variation, and all three species showed at least partly overlapping values for all nine characters. SVM performed the best of all the classifiers, with an overall accuracy of 91.4% and a per-species correct identification rate of 66.7%, 95.0%, and 80.0% for S. humilis, S. macrophylla, and S. mahagoni, respectively. The two-species model discriminated between S. macrophylla and S. mahagoni with accuracies of over 90.0% using SVM. These accuracies are lower than perfect forensic certainty but nonetheless demonstrate that quantitative wood anatomy data in combination with machine learning models can be applied as an efficient tool to discriminate anatomically between similar species in the wood anatomy laboratory. It is probable that a range of previously anatomically inseparable species may become identifiable by incorporating in-depth analysis of quantitative characters and appropriate statistical classifiers.
id UNSP_0e48cfd8dbf75bee930634e969c1d3a9
oai_identifier_str oai:repositorio.unesp.br:11449/195195
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoniCITESmachine learningquantitative wood anatomySVMSwieteniaIllegal logging and associated trade aggravate the over-exploitation of Swietenia species, of which S. macrophylla King, S. mahagoni (L.) Jacq, and S. humilis Zucc. have been listed in Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) Appendix II. Implementation of CITES necessitates the development of efficient forensic tools to identify wood species accurately, and ideally ones readily deployable in wood anatomy laboratories across the world. Herein, a method using quantitative wood anatomy data in combination with machine learning models to discriminate between three Swietenia species is presented, in addition to a second model focusing only on the two historically more important species S. mahagoni and S. macrophylla. The intra-and inter-specific variations in nine quantitative wood anatomical characters were measured and calculated based on 278 wood specimens, and four machine learning classifiers-Decision Tree C5.0, Naive Bayes (NB), Support Vector Machine (SVM), and Artificial Neural Network (ANN)-were used to discriminate between the species. Among these species, S. macrophylla exhibited the largest intraspecific variation, and all three species showed at least partly overlapping values for all nine characters. SVM performed the best of all the classifiers, with an overall accuracy of 91.4% and a per-species correct identification rate of 66.7%, 95.0%, and 80.0% for S. humilis, S. macrophylla, and S. mahagoni, respectively. The two-species model discriminated between S. macrophylla and S. mahagoni with accuracies of over 90.0% using SVM. These accuracies are lower than perfect forensic certainty but nonetheless demonstrate that quantitative wood anatomy data in combination with machine learning models can be applied as an efficient tool to discriminate anatomically between similar species in the wood anatomy laboratory. It is probable that a range of previously anatomically inseparable species may become identifiable by incorporating in-depth analysis of quantitative characters and appropriate statistical classifiers.US Department of StateChinese Acad Forestry, Chinese Res Inst Wood Ind, Dept Wood Anat & Utilizat, Beijing 100091, Peoples R ChinaChinese Acad Forestry, Wood Collect WOODPEDIA, Beijing 100091, Peoples R ChinaUS Forest Serv, Ctr Wood Anat Res, USDA, Forest Prod Lab, Madison, WI 53726 USAUniv Wisconsin, Dept Bot, Madison, WI 53706 USAPurdue Univ, Dept Forestry & Natl Resources, W Lafayette, IN 47907 USAUniv Estadual Paulista, Ciencias Biol Bot, BR-18610034 Botucatu, SP, BrazilUniv Estadual Paulista, Ciencias Biol Bot, BR-18610034 Botucatu, SP, BrazilUS Department of State: 19318814Y0010MdpiChinese Acad ForestryUS Forest ServUniv WisconsinPurdue UnivUniversidade Estadual Paulista (Unesp)He, TuoMarco, JoaoSoares, RichardYin, YafangWiedenhoeft, Alex C.2020-12-10T17:07:47Z2020-12-10T17:07:47Z2020-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article13http://dx.doi.org/10.3390/f11010036Forests. Basel: Mdpi, v. 11, n. 1, 13 p., 2020.http://hdl.handle.net/11449/19519510.3390/f11010036WOS:000513184500036Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengForestsinfo:eu-repo/semantics/openAccess2021-10-22T21:54:33Zoai:repositorio.unesp.br:11449/195195Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:21:28.061188Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
title Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
spellingShingle Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
He, Tuo
CITES
machine learning
quantitative wood anatomy
SVM
Swietenia
title_short Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
title_full Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
title_fullStr Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
title_full_unstemmed Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
title_sort Machine Learning Models with Quantitative Wood Anatomy Data Can Discriminate between Swietenia macrophylla and Swietenia mahagoni
author He, Tuo
author_facet He, Tuo
Marco, Joao
Soares, Richard
Yin, Yafang
Wiedenhoeft, Alex C.
author_role author
author2 Marco, Joao
Soares, Richard
Yin, Yafang
Wiedenhoeft, Alex C.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Chinese Acad Forestry
US Forest Serv
Univ Wisconsin
Purdue Univ
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv He, Tuo
Marco, Joao
Soares, Richard
Yin, Yafang
Wiedenhoeft, Alex C.
dc.subject.por.fl_str_mv CITES
machine learning
quantitative wood anatomy
SVM
Swietenia
topic CITES
machine learning
quantitative wood anatomy
SVM
Swietenia
description Illegal logging and associated trade aggravate the over-exploitation of Swietenia species, of which S. macrophylla King, S. mahagoni (L.) Jacq, and S. humilis Zucc. have been listed in Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) Appendix II. Implementation of CITES necessitates the development of efficient forensic tools to identify wood species accurately, and ideally ones readily deployable in wood anatomy laboratories across the world. Herein, a method using quantitative wood anatomy data in combination with machine learning models to discriminate between three Swietenia species is presented, in addition to a second model focusing only on the two historically more important species S. mahagoni and S. macrophylla. The intra-and inter-specific variations in nine quantitative wood anatomical characters were measured and calculated based on 278 wood specimens, and four machine learning classifiers-Decision Tree C5.0, Naive Bayes (NB), Support Vector Machine (SVM), and Artificial Neural Network (ANN)-were used to discriminate between the species. Among these species, S. macrophylla exhibited the largest intraspecific variation, and all three species showed at least partly overlapping values for all nine characters. SVM performed the best of all the classifiers, with an overall accuracy of 91.4% and a per-species correct identification rate of 66.7%, 95.0%, and 80.0% for S. humilis, S. macrophylla, and S. mahagoni, respectively. The two-species model discriminated between S. macrophylla and S. mahagoni with accuracies of over 90.0% using SVM. These accuracies are lower than perfect forensic certainty but nonetheless demonstrate that quantitative wood anatomy data in combination with machine learning models can be applied as an efficient tool to discriminate anatomically between similar species in the wood anatomy laboratory. It is probable that a range of previously anatomically inseparable species may become identifiable by incorporating in-depth analysis of quantitative characters and appropriate statistical classifiers.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-10T17:07:47Z
2020-12-10T17:07:47Z
2020-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/f11010036
Forests. Basel: Mdpi, v. 11, n. 1, 13 p., 2020.
http://hdl.handle.net/11449/195195
10.3390/f11010036
WOS:000513184500036
url http://dx.doi.org/10.3390/f11010036
http://hdl.handle.net/11449/195195
identifier_str_mv Forests. Basel: Mdpi, v. 11, n. 1, 13 p., 2020.
10.3390/f11010036
WOS:000513184500036
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Forests
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 13
dc.publisher.none.fl_str_mv Mdpi
publisher.none.fl_str_mv Mdpi
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129509850873856