Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis

Detalhes bibliográficos
Autor(a) principal: Dias, Camila A. O.
Data de Publicação: 2008
Outros Autores: Cano, Veridiana S. P., Rangel, Suzana M., Apponi, Luciano H., Frigieri, Mariana C., Muniz, Joao R. C., Garcia, Wanius, Park, Myung H., Garratt, Richard C., Zanelli, Cleslei Fernando [UNESP], Valentini, Sandro Roberto [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1111/j.1742-4658.2008.06345.x
http://hdl.handle.net/11449/7478
Resumo: Eukaryotic translation initiation factor 5A (eIF5A) is a protein that is highly conserved and essential for cell viability. This factor is the only protein known to contain the unique and essential amino acid residue hypusine. This work focused on the structural and functional characterization of Saccharomyces cerevisiae eIF5A. The tertiary structure of yeast eIF5A was modeled based on the structure of its Leishmania mexicana homologue and this model was used to predict the structural localization of new site-directed and randomly generated mutations. Most of the 40 new mutants exhibited phenotypes that resulted from eIF-5A protein-folding defects. Our data provided evidence that the C-terminal alpha-helix present in yeast eIF5A is an essential structural element, whereas the eIF5A N-terminal 10 amino acid extension not present in archaeal eIF5A homologs, is not. Moreover, the mutants containing substitutions at or in the vicinity of the hypusine modification site displayed nonviable or temperature-sensitive phenotypes and were defective in hypusine modification. Interestingly, two of the temperature-sensitive strains produced stable mutant eIF5A proteins - eIF5A(K56A) and eIF5A(Q22H,L93F)- and showed defects in protein synthesis at the restrictive temperature. Our data revealed important structural features of eIF5A that are required for its vital role in cell viability and underscored an essential function of eIF5A in the translation step of gene expression.
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spelling Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesiseIF5Ahypusinemutational analysisstructural modelingtranslationEukaryotic translation initiation factor 5A (eIF5A) is a protein that is highly conserved and essential for cell viability. This factor is the only protein known to contain the unique and essential amino acid residue hypusine. This work focused on the structural and functional characterization of Saccharomyces cerevisiae eIF5A. The tertiary structure of yeast eIF5A was modeled based on the structure of its Leishmania mexicana homologue and this model was used to predict the structural localization of new site-directed and randomly generated mutations. Most of the 40 new mutants exhibited phenotypes that resulted from eIF-5A protein-folding defects. Our data provided evidence that the C-terminal alpha-helix present in yeast eIF5A is an essential structural element, whereas the eIF5A N-terminal 10 amino acid extension not present in archaeal eIF5A homologs, is not. Moreover, the mutants containing substitutions at or in the vicinity of the hypusine modification site displayed nonviable or temperature-sensitive phenotypes and were defective in hypusine modification. Interestingly, two of the temperature-sensitive strains produced stable mutant eIF5A proteins - eIF5A(K56A) and eIF5A(Q22H,L93F)- and showed defects in protein synthesis at the restrictive temperature. Our data revealed important structural features of eIF5A that are required for its vital role in cell viability and underscored an essential function of eIF5A in the translation step of gene expression.Univ Estadual Paulista, Fac Ciencias Farmaceut, Dept Biol Sci, Sch Pharmaceut Sci, BR-14801902 São Paulo, BrazilNatl Inst Dent & Craniofacial Res, Oral & Pharyngeal Canc Branch, NIH, Bethesda, MD USAUniv São Paulo, Inst Phys, Dept Phys & Informat, Ctr Struct Mol Biotechnol, BR-05508 São Paulo, BrazilUniv Estadual Paulista, Fac Ciencias Farmaceut, Dept Biol Sci, Sch Pharmaceut Sci, BR-14801902 São Paulo, BrazilBlackwell PublishingUniversidade Estadual Paulista (Unesp)Natl Inst Dent & Craniofacial ResUniversidade de São Paulo (USP)Dias, Camila A. O.Cano, Veridiana S. P.Rangel, Suzana M.Apponi, Luciano H.Frigieri, Mariana C.Muniz, Joao R. C.Garcia, WaniusPark, Myung H.Garratt, Richard C.Zanelli, Cleslei Fernando [UNESP]Valentini, Sandro Roberto [UNESP]2014-05-20T13:24:16Z2014-05-20T13:24:16Z2008-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1874-1888http://dx.doi.org/10.1111/j.1742-4658.2008.06345.xFebs Journal. Oxford: Blackwell Publishing, v. 275, n. 8, p. 1874-1888, 2008.1742-464Xhttp://hdl.handle.net/11449/747810.1111/j.1742-4658.2008.06345.xWOS:000254499500025533325035504981415256654089001950000-0001-7831-1149Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengFEBS Journal4.530info:eu-repo/semantics/openAccess2024-06-24T13:07:51Zoai:repositorio.unesp.br:11449/7478Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-06-24T13:07:51Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
title Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
spellingShingle Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
Dias, Camila A. O.
eIF5A
hypusine
mutational analysis
structural modeling
translation
title_short Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
title_full Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
title_fullStr Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
title_full_unstemmed Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
title_sort Structural modeling and mutational analysis of yeast eukaryotic translation initiation factor 5A reveal new critical residues and reinforce its involvement in protein synthesis
author Dias, Camila A. O.
author_facet Dias, Camila A. O.
Cano, Veridiana S. P.
Rangel, Suzana M.
Apponi, Luciano H.
Frigieri, Mariana C.
Muniz, Joao R. C.
Garcia, Wanius
Park, Myung H.
Garratt, Richard C.
Zanelli, Cleslei Fernando [UNESP]
Valentini, Sandro Roberto [UNESP]
author_role author
author2 Cano, Veridiana S. P.
Rangel, Suzana M.
Apponi, Luciano H.
Frigieri, Mariana C.
Muniz, Joao R. C.
Garcia, Wanius
Park, Myung H.
Garratt, Richard C.
Zanelli, Cleslei Fernando [UNESP]
Valentini, Sandro Roberto [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Natl Inst Dent & Craniofacial Res
Universidade de São Paulo (USP)
dc.contributor.author.fl_str_mv Dias, Camila A. O.
Cano, Veridiana S. P.
Rangel, Suzana M.
Apponi, Luciano H.
Frigieri, Mariana C.
Muniz, Joao R. C.
Garcia, Wanius
Park, Myung H.
Garratt, Richard C.
Zanelli, Cleslei Fernando [UNESP]
Valentini, Sandro Roberto [UNESP]
dc.subject.por.fl_str_mv eIF5A
hypusine
mutational analysis
structural modeling
translation
topic eIF5A
hypusine
mutational analysis
structural modeling
translation
description Eukaryotic translation initiation factor 5A (eIF5A) is a protein that is highly conserved and essential for cell viability. This factor is the only protein known to contain the unique and essential amino acid residue hypusine. This work focused on the structural and functional characterization of Saccharomyces cerevisiae eIF5A. The tertiary structure of yeast eIF5A was modeled based on the structure of its Leishmania mexicana homologue and this model was used to predict the structural localization of new site-directed and randomly generated mutations. Most of the 40 new mutants exhibited phenotypes that resulted from eIF-5A protein-folding defects. Our data provided evidence that the C-terminal alpha-helix present in yeast eIF5A is an essential structural element, whereas the eIF5A N-terminal 10 amino acid extension not present in archaeal eIF5A homologs, is not. Moreover, the mutants containing substitutions at or in the vicinity of the hypusine modification site displayed nonviable or temperature-sensitive phenotypes and were defective in hypusine modification. Interestingly, two of the temperature-sensitive strains produced stable mutant eIF5A proteins - eIF5A(K56A) and eIF5A(Q22H,L93F)- and showed defects in protein synthesis at the restrictive temperature. Our data revealed important structural features of eIF5A that are required for its vital role in cell viability and underscored an essential function of eIF5A in the translation step of gene expression.
publishDate 2008
dc.date.none.fl_str_mv 2008-04-01
2014-05-20T13:24:16Z
2014-05-20T13:24:16Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1111/j.1742-4658.2008.06345.x
Febs Journal. Oxford: Blackwell Publishing, v. 275, n. 8, p. 1874-1888, 2008.
1742-464X
http://hdl.handle.net/11449/7478
10.1111/j.1742-4658.2008.06345.x
WOS:000254499500025
5333250355049814
1525665408900195
0000-0001-7831-1149
url http://dx.doi.org/10.1111/j.1742-4658.2008.06345.x
http://hdl.handle.net/11449/7478
identifier_str_mv Febs Journal. Oxford: Blackwell Publishing, v. 275, n. 8, p. 1874-1888, 2008.
1742-464X
10.1111/j.1742-4658.2008.06345.x
WOS:000254499500025
5333250355049814
1525665408900195
0000-0001-7831-1149
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv FEBS Journal
4.530
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1874-1888
dc.publisher.none.fl_str_mv Blackwell Publishing
publisher.none.fl_str_mv Blackwell Publishing
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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