Study of water and dimethylformamide interaction by computer simulation

Detalhes bibliográficos
Autor(a) principal: Cordeiro, João Manuel Marques [UNESP]
Data de Publicação: 1999
Outros Autores: Freitas, Luiz Carlos Gomide
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://www.znaturforsch.com/aa/v54a/c54a.htm
http://hdl.handle.net/11449/65715
Resumo: Monte Carlo simulations of water-dimethylformamide (DMF) mixtures were performed in the isothermal and isobaric ensemble at 298.15 K and 1 atm. The intermolecular interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term. The TIP4P model was used for simulating water molecules, and a six-site model previously optimised by us was used to represent DMF. The potential energy for the water-DMF interaction was obtained via standard geometric combining rules using the original potential parameters for the pure liquids. The radial distribution functions calculated for water-DMF mixtures show well characterised hydrogen bonds between the oxygen site of DMF and hydrogen of water. A structureless correlation curve was observed for the interaction between the hydrogen site of the carbonyl group and the oxygen site of water. Hydration effects on the stabilisation of the DMF molecule in aqueous solution have been investigated using statistical perturbation theory. The results show that energetic changes involved in the hydration process are not strong enough to stabilise another configuration of DMF than the planar one.
id UNSP_1891f0fee7c006a7744c0feea9fb4035
oai_identifier_str oai:repositorio.unesp.br:11449/65715
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Study of water and dimethylformamide interaction by computer simulationHydration of PeptidesMonte Carlo SimulationSolvent EffectsStatistical Perturbation TheoryMonte Carlo simulations of water-dimethylformamide (DMF) mixtures were performed in the isothermal and isobaric ensemble at 298.15 K and 1 atm. The intermolecular interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term. The TIP4P model was used for simulating water molecules, and a six-site model previously optimised by us was used to represent DMF. The potential energy for the water-DMF interaction was obtained via standard geometric combining rules using the original potential parameters for the pure liquids. The radial distribution functions calculated for water-DMF mixtures show well characterised hydrogen bonds between the oxygen site of DMF and hydrogen of water. A structureless correlation curve was observed for the interaction between the hydrogen site of the carbonyl group and the oxygen site of water. Hydration effects on the stabilisation of the DMF molecule in aqueous solution have been investigated using statistical perturbation theory. The results show that energetic changes involved in the hydration process are not strong enough to stabilise another configuration of DMF than the planar one.Depto. de Fis. e Química Faculdade Engenharia Ilha Solteira UNESP, CP 31, 15385-000 - Ilha Solteira-SPDepto. Quim. Univ. Fed. de S. Carlos, CP 676, 13565-905 São Carlos-SPDepto. de Fis. e Química Faculdade Engenharia Ilha Solteira UNESP, CP 31, 15385-000 - Ilha Solteira-SPUniversidade Estadual Paulista (Unesp)Universidade Federal de São Carlos (UFSCar)Cordeiro, João Manuel Marques [UNESP]Freitas, Luiz Carlos Gomide2014-05-27T11:19:42Z2014-05-27T11:19:42Z1999-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article110-116application/pdfhttp://www.znaturforsch.com/aa/v54a/c54a.htmZeitschrift fur Naturforschung - Section A Journal of Physical Sciences, v. 54, n. 2, p. 110-116, 1999.0932-0784http://hdl.handle.net/11449/65715WOS:0000790936000042-s2.0-00024542312-s2.0-0002454231.pdf5208396607953739Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengZeitschrift fur Naturforschung - Section A Journal of Physical Sciences1.4140,403info:eu-repo/semantics/openAccess2024-07-10T14:07:12Zoai:repositorio.unesp.br:11449/65715Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:24:49.256646Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Study of water and dimethylformamide interaction by computer simulation
title Study of water and dimethylformamide interaction by computer simulation
spellingShingle Study of water and dimethylformamide interaction by computer simulation
Cordeiro, João Manuel Marques [UNESP]
Hydration of Peptides
Monte Carlo Simulation
Solvent Effects
Statistical Perturbation Theory
title_short Study of water and dimethylformamide interaction by computer simulation
title_full Study of water and dimethylformamide interaction by computer simulation
title_fullStr Study of water and dimethylformamide interaction by computer simulation
title_full_unstemmed Study of water and dimethylformamide interaction by computer simulation
title_sort Study of water and dimethylformamide interaction by computer simulation
author Cordeiro, João Manuel Marques [UNESP]
author_facet Cordeiro, João Manuel Marques [UNESP]
Freitas, Luiz Carlos Gomide
author_role author
author2 Freitas, Luiz Carlos Gomide
author2_role author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Federal de São Carlos (UFSCar)
dc.contributor.author.fl_str_mv Cordeiro, João Manuel Marques [UNESP]
Freitas, Luiz Carlos Gomide
dc.subject.por.fl_str_mv Hydration of Peptides
Monte Carlo Simulation
Solvent Effects
Statistical Perturbation Theory
topic Hydration of Peptides
Monte Carlo Simulation
Solvent Effects
Statistical Perturbation Theory
description Monte Carlo simulations of water-dimethylformamide (DMF) mixtures were performed in the isothermal and isobaric ensemble at 298.15 K and 1 atm. The intermolecular interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term. The TIP4P model was used for simulating water molecules, and a six-site model previously optimised by us was used to represent DMF. The potential energy for the water-DMF interaction was obtained via standard geometric combining rules using the original potential parameters for the pure liquids. The radial distribution functions calculated for water-DMF mixtures show well characterised hydrogen bonds between the oxygen site of DMF and hydrogen of water. A structureless correlation curve was observed for the interaction between the hydrogen site of the carbonyl group and the oxygen site of water. Hydration effects on the stabilisation of the DMF molecule in aqueous solution have been investigated using statistical perturbation theory. The results show that energetic changes involved in the hydration process are not strong enough to stabilise another configuration of DMF than the planar one.
publishDate 1999
dc.date.none.fl_str_mv 1999-02-01
2014-05-27T11:19:42Z
2014-05-27T11:19:42Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.znaturforsch.com/aa/v54a/c54a.htm
Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences, v. 54, n. 2, p. 110-116, 1999.
0932-0784
http://hdl.handle.net/11449/65715
WOS:000079093600004
2-s2.0-0002454231
2-s2.0-0002454231.pdf
5208396607953739
url http://www.znaturforsch.com/aa/v54a/c54a.htm
http://hdl.handle.net/11449/65715
identifier_str_mv Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences, v. 54, n. 2, p. 110-116, 1999.
0932-0784
WOS:000079093600004
2-s2.0-0002454231
2-s2.0-0002454231.pdf
5208396607953739
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences
1.414
0,403
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 110-116
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808128357264523264