Study of water and dimethylformamide interaction by computer simulation
Autor(a) principal: | |
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Data de Publicação: | 1999 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://www.znaturforsch.com/aa/v54a/c54a.htm http://hdl.handle.net/11449/65715 |
Resumo: | Monte Carlo simulations of water-dimethylformamide (DMF) mixtures were performed in the isothermal and isobaric ensemble at 298.15 K and 1 atm. The intermolecular interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term. The TIP4P model was used for simulating water molecules, and a six-site model previously optimised by us was used to represent DMF. The potential energy for the water-DMF interaction was obtained via standard geometric combining rules using the original potential parameters for the pure liquids. The radial distribution functions calculated for water-DMF mixtures show well characterised hydrogen bonds between the oxygen site of DMF and hydrogen of water. A structureless correlation curve was observed for the interaction between the hydrogen site of the carbonyl group and the oxygen site of water. Hydration effects on the stabilisation of the DMF molecule in aqueous solution have been investigated using statistical perturbation theory. The results show that energetic changes involved in the hydration process are not strong enough to stabilise another configuration of DMF than the planar one. |
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Repositório Institucional da UNESP |
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Study of water and dimethylformamide interaction by computer simulationHydration of PeptidesMonte Carlo SimulationSolvent EffectsStatistical Perturbation TheoryMonte Carlo simulations of water-dimethylformamide (DMF) mixtures were performed in the isothermal and isobaric ensemble at 298.15 K and 1 atm. The intermolecular interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term. The TIP4P model was used for simulating water molecules, and a six-site model previously optimised by us was used to represent DMF. The potential energy for the water-DMF interaction was obtained via standard geometric combining rules using the original potential parameters for the pure liquids. The radial distribution functions calculated for water-DMF mixtures show well characterised hydrogen bonds between the oxygen site of DMF and hydrogen of water. A structureless correlation curve was observed for the interaction between the hydrogen site of the carbonyl group and the oxygen site of water. Hydration effects on the stabilisation of the DMF molecule in aqueous solution have been investigated using statistical perturbation theory. The results show that energetic changes involved in the hydration process are not strong enough to stabilise another configuration of DMF than the planar one.Depto. de Fis. e Química Faculdade Engenharia Ilha Solteira UNESP, CP 31, 15385-000 - Ilha Solteira-SPDepto. Quim. Univ. Fed. de S. Carlos, CP 676, 13565-905 São Carlos-SPDepto. de Fis. e Química Faculdade Engenharia Ilha Solteira UNESP, CP 31, 15385-000 - Ilha Solteira-SPUniversidade Estadual Paulista (Unesp)Universidade Federal de São Carlos (UFSCar)Cordeiro, João Manuel Marques [UNESP]Freitas, Luiz Carlos Gomide2014-05-27T11:19:42Z2014-05-27T11:19:42Z1999-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article110-116application/pdfhttp://www.znaturforsch.com/aa/v54a/c54a.htmZeitschrift fur Naturforschung - Section A Journal of Physical Sciences, v. 54, n. 2, p. 110-116, 1999.0932-0784http://hdl.handle.net/11449/65715WOS:0000790936000042-s2.0-00024542312-s2.0-0002454231.pdf5208396607953739Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengZeitschrift fur Naturforschung - Section A Journal of Physical Sciences1.4140,403info:eu-repo/semantics/openAccess2024-07-10T14:07:12Zoai:repositorio.unesp.br:11449/65715Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:24:49.256646Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Study of water and dimethylformamide interaction by computer simulation |
title |
Study of water and dimethylformamide interaction by computer simulation |
spellingShingle |
Study of water and dimethylformamide interaction by computer simulation Cordeiro, João Manuel Marques [UNESP] Hydration of Peptides Monte Carlo Simulation Solvent Effects Statistical Perturbation Theory |
title_short |
Study of water and dimethylformamide interaction by computer simulation |
title_full |
Study of water and dimethylformamide interaction by computer simulation |
title_fullStr |
Study of water and dimethylformamide interaction by computer simulation |
title_full_unstemmed |
Study of water and dimethylformamide interaction by computer simulation |
title_sort |
Study of water and dimethylformamide interaction by computer simulation |
author |
Cordeiro, João Manuel Marques [UNESP] |
author_facet |
Cordeiro, João Manuel Marques [UNESP] Freitas, Luiz Carlos Gomide |
author_role |
author |
author2 |
Freitas, Luiz Carlos Gomide |
author2_role |
author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Federal de São Carlos (UFSCar) |
dc.contributor.author.fl_str_mv |
Cordeiro, João Manuel Marques [UNESP] Freitas, Luiz Carlos Gomide |
dc.subject.por.fl_str_mv |
Hydration of Peptides Monte Carlo Simulation Solvent Effects Statistical Perturbation Theory |
topic |
Hydration of Peptides Monte Carlo Simulation Solvent Effects Statistical Perturbation Theory |
description |
Monte Carlo simulations of water-dimethylformamide (DMF) mixtures were performed in the isothermal and isobaric ensemble at 298.15 K and 1 atm. The intermolecular interaction energy was calculated using the classical 6-12 Lennard-Jones pairwise potential plus a Coulomb term. The TIP4P model was used for simulating water molecules, and a six-site model previously optimised by us was used to represent DMF. The potential energy for the water-DMF interaction was obtained via standard geometric combining rules using the original potential parameters for the pure liquids. The radial distribution functions calculated for water-DMF mixtures show well characterised hydrogen bonds between the oxygen site of DMF and hydrogen of water. A structureless correlation curve was observed for the interaction between the hydrogen site of the carbonyl group and the oxygen site of water. Hydration effects on the stabilisation of the DMF molecule in aqueous solution have been investigated using statistical perturbation theory. The results show that energetic changes involved in the hydration process are not strong enough to stabilise another configuration of DMF than the planar one. |
publishDate |
1999 |
dc.date.none.fl_str_mv |
1999-02-01 2014-05-27T11:19:42Z 2014-05-27T11:19:42Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.znaturforsch.com/aa/v54a/c54a.htm Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences, v. 54, n. 2, p. 110-116, 1999. 0932-0784 http://hdl.handle.net/11449/65715 WOS:000079093600004 2-s2.0-0002454231 2-s2.0-0002454231.pdf 5208396607953739 |
url |
http://www.znaturforsch.com/aa/v54a/c54a.htm http://hdl.handle.net/11449/65715 |
identifier_str_mv |
Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences, v. 54, n. 2, p. 110-116, 1999. 0932-0784 WOS:000079093600004 2-s2.0-0002454231 2-s2.0-0002454231.pdf 5208396607953739 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Zeitschrift fur Naturforschung - Section A Journal of Physical Sciences 1.414 0,403 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
110-116 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128357264523264 |