Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1111/mec.15330 http://hdl.handle.net/11449/198407 |
Resumo: | Environmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree. |
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Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae)Avicennia germinans (Black Mangrove)drought-toleranceecological genomicsnextRADRNA-Seqtropical treeEnvironmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Center for Hierarchical Manufacturing, National Science FoundationNational Academy of Sciences, Republic of KoreaDepartment of Plant Biology Institute of Biology University of Campinas (Unicamp)Institute of Biosciences São Paulo State University (Unesp)Department of Biological Sciences Louisiana State University (LSU) LouisianaSão Paulo Agency for Agribusiness Technology (APTA)Institute of Biosciences São Paulo State University (Unesp)FAPESP: 2011/52072-0FAPESP: 2013/08086-1FAPESP: 2013/26793-7FAPESP: 2014/22821-9CNPq: 309661/2014-5CNPq: 448286/2014-9CAPES: 88882.160095/2013-01CAPES: 88887.177158/2018-00CAPES: 99999.008084/2015-07Center for Hierarchical Manufacturing, National Science Foundation: MCB 1616827National Academy of Sciences, Republic of Korea: PJ01317301Universidade Estadual de Campinas (UNICAMP)Universidade Estadual Paulista (Unesp)LouisianaSão Paulo Agency for Agribusiness Technology (APTA)Cruz, Mariana VargasMori, Gustavo Maruyama [UNESP]Oh, Dong-HaDassanayake, MaheshiZucchi, Maria ImaculadaOliveira, Rafael SilvaSouza, Anete Pereira de2020-12-12T01:12:01Z2020-12-12T01:12:01Z2020-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article344-362http://dx.doi.org/10.1111/mec.15330Molecular Ecology, v. 29, n. 2, p. 344-362, 2020.1365-294X0962-1083http://hdl.handle.net/11449/19840710.1111/mec.153302-s2.0-85077903696Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular Ecologyinfo:eu-repo/semantics/openAccess2021-10-23T11:03:03Zoai:repositorio.unesp.br:11449/198407Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:00:22.302933Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
title |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
spellingShingle |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) Cruz, Mariana Vargas Avicennia germinans (Black Mangrove) drought-tolerance ecological genomics nextRAD RNA-Seq tropical tree |
title_short |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
title_full |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
title_fullStr |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
title_full_unstemmed |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
title_sort |
Molecular responses to freshwater limitation in the mangrove tree Avicennia germinans (Acanthaceae) |
author |
Cruz, Mariana Vargas |
author_facet |
Cruz, Mariana Vargas Mori, Gustavo Maruyama [UNESP] Oh, Dong-Ha Dassanayake, Maheshi Zucchi, Maria Imaculada Oliveira, Rafael Silva Souza, Anete Pereira de |
author_role |
author |
author2 |
Mori, Gustavo Maruyama [UNESP] Oh, Dong-Ha Dassanayake, Maheshi Zucchi, Maria Imaculada Oliveira, Rafael Silva Souza, Anete Pereira de |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual de Campinas (UNICAMP) Universidade Estadual Paulista (Unesp) Louisiana São Paulo Agency for Agribusiness Technology (APTA) |
dc.contributor.author.fl_str_mv |
Cruz, Mariana Vargas Mori, Gustavo Maruyama [UNESP] Oh, Dong-Ha Dassanayake, Maheshi Zucchi, Maria Imaculada Oliveira, Rafael Silva Souza, Anete Pereira de |
dc.subject.por.fl_str_mv |
Avicennia germinans (Black Mangrove) drought-tolerance ecological genomics nextRAD RNA-Seq tropical tree |
topic |
Avicennia germinans (Black Mangrove) drought-tolerance ecological genomics nextRAD RNA-Seq tropical tree |
description |
Environmental variation along the geographical space can shape populations by natural selection. In the context of global warming and changing precipitation regimes, it is crucial to understand the role of environmental heterogeneity in tropical trees adaptation, given their disproportional contribution to water and carbon biogeochemical cycles. Here, we investigated how heterogeneity in freshwater availability along tropical wetlands has influenced molecular variations of the black mangrove (Avicennia germinans). A total of 57 trees were sampled at seven sites differing markedly in precipitation regime and riverine freshwater inputs. Using 2,297 genome-wide single nucleotide polymorphic markers, we found signatures of natural selection by the association between variations in allele frequencies and environmental variables, including the precipitation of the warmest quarter and the annual precipitation. Additionally, we found candidate loci for selection based on statistical deviations from neutral expectations of interpopulation differentiation. Most candidate loci within transcribed sequences were functionally associated with central aspects of drought tolerance or plant response to drought. Moreover, our results suggest the occurrence of the rapid evolution of a population, probably in response to sudden and persistent limitations in plant access to soil water, following a road construction in 1974. Observations supporting rapid evolution included the reduction in tree size and changes in allele frequencies and in transcript expression associated with increased drought tolerance through the accumulation of osmoprotectants and antioxidants, biosynthesis of cuticles, protection against protein degradation, stomatal closure, photorespiration and photosynthesis. We describe a major role of spatial heterogeneity in freshwater availability in the specialization of this typically tropical tree. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-12T01:12:01Z 2020-12-12T01:12:01Z 2020-01-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1111/mec.15330 Molecular Ecology, v. 29, n. 2, p. 344-362, 2020. 1365-294X 0962-1083 http://hdl.handle.net/11449/198407 10.1111/mec.15330 2-s2.0-85077903696 |
url |
http://dx.doi.org/10.1111/mec.15330 http://hdl.handle.net/11449/198407 |
identifier_str_mv |
Molecular Ecology, v. 29, n. 2, p. 344-362, 2020. 1365-294X 0962-1083 10.1111/mec.15330 2-s2.0-85077903696 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Molecular Ecology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
344-362 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129481064316928 |