Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate
Autor(a) principal: | |
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Data de Publicação: | 2003 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://www.geneticsmr.com//year2003/vol2-4/pdf/gmr0065.pdf http://hdl.handle.net/11449/67545 |
Resumo: | Pyrophosphate-dependent phosphofructokinase (PPi-PFK) has been detected in several types of plant cells, but the gene has not been reported in sugar cane. Using Citrux paradixi PPi-PFK gene (AF095520 and AF095521) sequences to search the sugar cane EST database, we have identified both the α and β subunits of this enzyme. The deduced amino acid sequences showed 76 and 80% similarity with the corresponding α and β subunits of C. paradisi. A high degree of similarity was also observed among the PFK β subunits when the alignment of the sugar cane sequences was compared to those of Ricinus communis and Solanum tuberosum, it appears that α and β are two distinct subunits; they were found at different concentrations in several sugar cane tissues. It remains to be determined if the different gene expression levels have some physiological importance and how they affect sucrose synthesis, export, and storage in vacuoles. A comparison between the amino acid sequences of β PFKs from a variety of organisms allowed us to identify the two critical Asp residues typical of this enzyme's activity site and the other binding sites; these residues are tightly conserved in all members of this protein family. Apparently, there are catalytic residues on the β subunit of the pyrophosphate-dependent enzyme. |
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Repositório Institucional da UNESP |
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Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphateATPPPi-PFKPyrophosphate phosphofructose 1-kinaseSucroseSucrose synthaseSugar canecomplementary DNAinorganic pyrophosphatasephosphotransferasepyrophosphate fructose 6 phosphate 1 phosphotransferasepyrophosphate-fructose 6-phosphate 1-phosphotransferasepyrophosphatepyrophosphate phosphofructose 1 kinasesucroseunclassified drugamino acid sequenceenzymologygeneticsmetabolismmolecular geneticssugarcanealpha chainbeta chaincarbohydrate synthesisDNA libraryenergy metabolismenzyme active siteenzyme bindingenzyme subunitexpressed sequence taggene expressiongene identificationgrapefruitnonhumanplant geneticsplant tissuepotatoRicinus communisspecies comparisontissue levelAmino Acid SequenceDNA, ComplementaryMolecular Sequence DataPhosphotransferasesPyrophosphatasesSaccharumArundinariaCitrus x paradisiSaccharum hybrid cultivarSolanumSolanum tuberosumPyrophosphate-dependent phosphofructokinase (PPi-PFK) has been detected in several types of plant cells, but the gene has not been reported in sugar cane. Using Citrux paradixi PPi-PFK gene (AF095520 and AF095521) sequences to search the sugar cane EST database, we have identified both the α and β subunits of this enzyme. The deduced amino acid sequences showed 76 and 80% similarity with the corresponding α and β subunits of C. paradisi. A high degree of similarity was also observed among the PFK β subunits when the alignment of the sugar cane sequences was compared to those of Ricinus communis and Solanum tuberosum, it appears that α and β are two distinct subunits; they were found at different concentrations in several sugar cane tissues. It remains to be determined if the different gene expression levels have some physiological importance and how they affect sucrose synthesis, export, and storage in vacuoles. A comparison between the amino acid sequences of β PFKs from a variety of organisms allowed us to identify the two critical Asp residues typical of this enzyme's activity site and the other binding sites; these residues are tightly conserved in all members of this protein family. Apparently, there are catalytic residues on the β subunit of the pyrophosphate-dependent enzyme.Departamento de Tecnologia Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPBrazilian Clone Collection Center Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPDepartamento de Producao Vegetal Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPDepto. de Biol. Apl. a Agropecuaria Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPDepartamento de Tecnologia Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPBrazilian Clone Collection Center Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPDepartamento de Producao Vegetal Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPDepto. de Biol. Apl. a Agropecuaria Fac. Cie. Agrarias/Vet. Jaboticabal UNESP, Jaboticabal, SPUniversidade Estadual Paulista (Unesp)Suzuki, J. [UNESP]Mutton, M. A. [UNESP]Ferro, M. I T [UNESP]Lemos, M. V F [UNESP]Pizauro, J. M. [UNESP]Mutton, M. J R [UNESP]Di Mauro, S. M Z [UNESP]2014-05-27T11:20:59Z2014-05-27T11:20:59Z2003-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article376-382application/pdfhttp://www.geneticsmr.com//year2003/vol2-4/pdf/gmr0065.pdfGenetics and Molecular Research, v. 2, n. 4, p. 376-382, 2003.1676-5680http://hdl.handle.net/11449/675452-s2.0-25424631072-s2.0-2542463107.pdf895114117257998571792730606247612663920223082171Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Research0,439info:eu-repo/semantics/openAccess2024-06-07T15:31:59Zoai:repositorio.unesp.br:11449/67545Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:06:19.485211Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
title |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
spellingShingle |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate Suzuki, J. [UNESP] ATP PPi-PFK Pyrophosphate phosphofructose 1-kinase Sucrose Sucrose synthase Sugar cane complementary DNA inorganic pyrophosphatase phosphotransferase pyrophosphate fructose 6 phosphate 1 phosphotransferase pyrophosphate-fructose 6-phosphate 1-phosphotransferase pyrophosphate pyrophosphate phosphofructose 1 kinase sucrose unclassified drug amino acid sequence enzymology genetics metabolism molecular genetics sugarcane alpha chain beta chain carbohydrate synthesis DNA library energy metabolism enzyme active site enzyme binding enzyme subunit expressed sequence tag gene expression gene identification grapefruit nonhuman plant genetics plant tissue potato Ricinus communis species comparison tissue level Amino Acid Sequence DNA, Complementary Molecular Sequence Data Phosphotransferases Pyrophosphatases Saccharum Arundinaria Citrus x paradisi Saccharum hybrid cultivar Solanum Solanum tuberosum |
title_short |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
title_full |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
title_fullStr |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
title_full_unstemmed |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
title_sort |
Putative pyrophosphate phosphofructose 1-kinase genes identified in sugarcane may be getting energy from pyrophosphate |
author |
Suzuki, J. [UNESP] |
author_facet |
Suzuki, J. [UNESP] Mutton, M. A. [UNESP] Ferro, M. I T [UNESP] Lemos, M. V F [UNESP] Pizauro, J. M. [UNESP] Mutton, M. J R [UNESP] Di Mauro, S. M Z [UNESP] |
author_role |
author |
author2 |
Mutton, M. A. [UNESP] Ferro, M. I T [UNESP] Lemos, M. V F [UNESP] Pizauro, J. M. [UNESP] Mutton, M. J R [UNESP] Di Mauro, S. M Z [UNESP] |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Suzuki, J. [UNESP] Mutton, M. A. [UNESP] Ferro, M. I T [UNESP] Lemos, M. V F [UNESP] Pizauro, J. M. [UNESP] Mutton, M. J R [UNESP] Di Mauro, S. M Z [UNESP] |
dc.subject.por.fl_str_mv |
ATP PPi-PFK Pyrophosphate phosphofructose 1-kinase Sucrose Sucrose synthase Sugar cane complementary DNA inorganic pyrophosphatase phosphotransferase pyrophosphate fructose 6 phosphate 1 phosphotransferase pyrophosphate-fructose 6-phosphate 1-phosphotransferase pyrophosphate pyrophosphate phosphofructose 1 kinase sucrose unclassified drug amino acid sequence enzymology genetics metabolism molecular genetics sugarcane alpha chain beta chain carbohydrate synthesis DNA library energy metabolism enzyme active site enzyme binding enzyme subunit expressed sequence tag gene expression gene identification grapefruit nonhuman plant genetics plant tissue potato Ricinus communis species comparison tissue level Amino Acid Sequence DNA, Complementary Molecular Sequence Data Phosphotransferases Pyrophosphatases Saccharum Arundinaria Citrus x paradisi Saccharum hybrid cultivar Solanum Solanum tuberosum |
topic |
ATP PPi-PFK Pyrophosphate phosphofructose 1-kinase Sucrose Sucrose synthase Sugar cane complementary DNA inorganic pyrophosphatase phosphotransferase pyrophosphate fructose 6 phosphate 1 phosphotransferase pyrophosphate-fructose 6-phosphate 1-phosphotransferase pyrophosphate pyrophosphate phosphofructose 1 kinase sucrose unclassified drug amino acid sequence enzymology genetics metabolism molecular genetics sugarcane alpha chain beta chain carbohydrate synthesis DNA library energy metabolism enzyme active site enzyme binding enzyme subunit expressed sequence tag gene expression gene identification grapefruit nonhuman plant genetics plant tissue potato Ricinus communis species comparison tissue level Amino Acid Sequence DNA, Complementary Molecular Sequence Data Phosphotransferases Pyrophosphatases Saccharum Arundinaria Citrus x paradisi Saccharum hybrid cultivar Solanum Solanum tuberosum |
description |
Pyrophosphate-dependent phosphofructokinase (PPi-PFK) has been detected in several types of plant cells, but the gene has not been reported in sugar cane. Using Citrux paradixi PPi-PFK gene (AF095520 and AF095521) sequences to search the sugar cane EST database, we have identified both the α and β subunits of this enzyme. The deduced amino acid sequences showed 76 and 80% similarity with the corresponding α and β subunits of C. paradisi. A high degree of similarity was also observed among the PFK β subunits when the alignment of the sugar cane sequences was compared to those of Ricinus communis and Solanum tuberosum, it appears that α and β are two distinct subunits; they were found at different concentrations in several sugar cane tissues. It remains to be determined if the different gene expression levels have some physiological importance and how they affect sucrose synthesis, export, and storage in vacuoles. A comparison between the amino acid sequences of β PFKs from a variety of organisms allowed us to identify the two critical Asp residues typical of this enzyme's activity site and the other binding sites; these residues are tightly conserved in all members of this protein family. Apparently, there are catalytic residues on the β subunit of the pyrophosphate-dependent enzyme. |
publishDate |
2003 |
dc.date.none.fl_str_mv |
2003-12-01 2014-05-27T11:20:59Z 2014-05-27T11:20:59Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://www.geneticsmr.com//year2003/vol2-4/pdf/gmr0065.pdf Genetics and Molecular Research, v. 2, n. 4, p. 376-382, 2003. 1676-5680 http://hdl.handle.net/11449/67545 2-s2.0-2542463107 2-s2.0-2542463107.pdf 8951141172579985 7179273060624761 2663920223082171 |
url |
http://www.geneticsmr.com//year2003/vol2-4/pdf/gmr0065.pdf http://hdl.handle.net/11449/67545 |
identifier_str_mv |
Genetics and Molecular Research, v. 2, n. 4, p. 376-382, 2003. 1676-5680 2-s2.0-2542463107 2-s2.0-2542463107.pdf 8951141172579985 7179273060624761 2663920223082171 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Research 0,439 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
376-382 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128894979538944 |