The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy

Detalhes bibliográficos
Autor(a) principal: Calanca, Naiade [UNESP]
Data de Publicação: 2019
Outros Autores: Paschoal, Ana Paula [UNESP], Munhoz, Érika Prando [UNESP], Galindo, Layla Testa [UNESP], Barbosa, Barbara Mitsuyasu [UNESP], Caldeira, José Roberto Fígaro, Oliveira, Rogério Antonio [UNESP], Cavalli, Luciane Regina, Rogatto, Silvia Regina, Rainho, Cláudia Aparecida [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/15592294.2019.1615355
http://hdl.handle.net/11449/190427
Resumo: Alternative protein-coding transcripts of the RASSF1 gene have been associated with dual functions in human cancer: while RASSF1C isoform has oncogenic properties, RASSF1A is a tumour suppressor frequently silenced by hypermethylation. Recently, the antisense long non-coding RNA RASSF1 (ANRASSF1) was implicated in a locus-specific mechanism for the RASSF1A epigenetic repression mediated by PRC2 (Polycomb Repressive Complex 2). Here, we evaluated the methylation patterns of the promoter regions of RASSF1A and RASSF1C and the expression levels of these RASSF1 transcripts in breast cancer and breast cancer cell lines. As expected, RASSF1C remained unmethylated and RASSF1A was hypermethylated at high frequencies in 75 primary breast cancers, and also in a panel of three mammary epithelial cells (MEC) and 10 breast cancer cell lines (BCC). Although RASSF1C was expressed in all cell lines, only two of them expressed the transcript RASSF1A. ANRASSF1 expression levels were increased in six BCCs. In vitro induced demethylation with 5-Aza-2ʹ-deoxicytydine (5-Aza-dC) resulted in up-regulation of RASSF1A and an inverse correlation with ANRASSF1 relative abundance in BCCs. However, increased levels of both transcripts were observed in two MECs (184A1 and MCF10A) after treatment with 5-Aza-dC. Overall, these findings indicate that ANRASSF1 is differentially expressed in MECs and BCCs. The lncRNA ANRASSF1 provides new perspectives as a therapeutic target for locus-specific regulation of RASSF1A.
id UNSP_1e8739667cce91b443391b2e8a37447b
oai_identifier_str oai:repositorio.unesp.br:11449/190427
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapyDNA methylationlncRNAlocus-specific epigenetic repressionRASSF1-AS1RASSF1ARASSF1CAlternative protein-coding transcripts of the RASSF1 gene have been associated with dual functions in human cancer: while RASSF1C isoform has oncogenic properties, RASSF1A is a tumour suppressor frequently silenced by hypermethylation. Recently, the antisense long non-coding RNA RASSF1 (ANRASSF1) was implicated in a locus-specific mechanism for the RASSF1A epigenetic repression mediated by PRC2 (Polycomb Repressive Complex 2). Here, we evaluated the methylation patterns of the promoter regions of RASSF1A and RASSF1C and the expression levels of these RASSF1 transcripts in breast cancer and breast cancer cell lines. As expected, RASSF1C remained unmethylated and RASSF1A was hypermethylated at high frequencies in 75 primary breast cancers, and also in a panel of three mammary epithelial cells (MEC) and 10 breast cancer cell lines (BCC). Although RASSF1C was expressed in all cell lines, only two of them expressed the transcript RASSF1A. ANRASSF1 expression levels were increased in six BCCs. In vitro induced demethylation with 5-Aza-2ʹ-deoxicytydine (5-Aza-dC) resulted in up-regulation of RASSF1A and an inverse correlation with ANRASSF1 relative abundance in BCCs. However, increased levels of both transcripts were observed in two MECs (184A1 and MCF10A) after treatment with 5-Aza-dC. Overall, these findings indicate that ANRASSF1 is differentially expressed in MECs and BCCs. The lncRNA ANRASSF1 provides new perspectives as a therapeutic target for locus-specific regulation of RASSF1A.Department of Genetics Institute of Biosciences São Paulo State University (Unesp)Department of Senology Amaral Carvalho HospitalDepartment of Biostatistics Institute of Biosciences São Paulo State University (Unesp)Department of Oncology Georgetown University Medical CenterFaculdades Pequeno Préncipe e Instituto de Pesquisa Pelé Pequeno PríncipeDepartment of Clinical Genetics University Hospital Institute of Regional Health Research University of Southern Denmark VejleDepartment of Genetics Institute of Biosciences São Paulo State University (Unesp)Department of Biostatistics Institute of Biosciences São Paulo State University (Unesp)Universidade Estadual Paulista (Unesp)Amaral Carvalho HospitalGeorgetown University Medical CenterFaculdades Pequeno Préncipe e Instituto de Pesquisa Pelé Pequeno PríncipeUniversity of Southern Denmark VejleCalanca, Naiade [UNESP]Paschoal, Ana Paula [UNESP]Munhoz, Érika Prando [UNESP]Galindo, Layla Testa [UNESP]Barbosa, Barbara Mitsuyasu [UNESP]Caldeira, José Roberto FígaroOliveira, Rogério Antonio [UNESP]Cavalli, Luciane ReginaRogatto, Silvia ReginaRainho, Cláudia Aparecida [UNESP]2019-10-06T17:12:53Z2019-10-06T17:12:53Z2019-08-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article741-750http://dx.doi.org/10.1080/15592294.2019.1615355Epigenetics, v. 14, n. 8, p. 741-750, 2019.1559-23081559-2294http://hdl.handle.net/11449/19042710.1080/15592294.2019.16153552-s2.0-8506765174588148235451595040000-0002-0285-1162Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengEpigeneticsinfo:eu-repo/semantics/openAccess2021-10-22T22:17:23Zoai:repositorio.unesp.br:11449/190427Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-22T22:17:23Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
title The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
spellingShingle The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
Calanca, Naiade [UNESP]
DNA methylation
lncRNA
locus-specific epigenetic repression
RASSF1-AS1
RASSF1A
RASSF1C
title_short The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
title_full The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
title_fullStr The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
title_full_unstemmed The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
title_sort The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
author Calanca, Naiade [UNESP]
author_facet Calanca, Naiade [UNESP]
Paschoal, Ana Paula [UNESP]
Munhoz, Érika Prando [UNESP]
Galindo, Layla Testa [UNESP]
Barbosa, Barbara Mitsuyasu [UNESP]
Caldeira, José Roberto Fígaro
Oliveira, Rogério Antonio [UNESP]
Cavalli, Luciane Regina
Rogatto, Silvia Regina
Rainho, Cláudia Aparecida [UNESP]
author_role author
author2 Paschoal, Ana Paula [UNESP]
Munhoz, Érika Prando [UNESP]
Galindo, Layla Testa [UNESP]
Barbosa, Barbara Mitsuyasu [UNESP]
Caldeira, José Roberto Fígaro
Oliveira, Rogério Antonio [UNESP]
Cavalli, Luciane Regina
Rogatto, Silvia Regina
Rainho, Cláudia Aparecida [UNESP]
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Amaral Carvalho Hospital
Georgetown University Medical Center
Faculdades Pequeno Préncipe e Instituto de Pesquisa Pelé Pequeno Príncipe
University of Southern Denmark Vejle
dc.contributor.author.fl_str_mv Calanca, Naiade [UNESP]
Paschoal, Ana Paula [UNESP]
Munhoz, Érika Prando [UNESP]
Galindo, Layla Testa [UNESP]
Barbosa, Barbara Mitsuyasu [UNESP]
Caldeira, José Roberto Fígaro
Oliveira, Rogério Antonio [UNESP]
Cavalli, Luciane Regina
Rogatto, Silvia Regina
Rainho, Cláudia Aparecida [UNESP]
dc.subject.por.fl_str_mv DNA methylation
lncRNA
locus-specific epigenetic repression
RASSF1-AS1
RASSF1A
RASSF1C
topic DNA methylation
lncRNA
locus-specific epigenetic repression
RASSF1-AS1
RASSF1A
RASSF1C
description Alternative protein-coding transcripts of the RASSF1 gene have been associated with dual functions in human cancer: while RASSF1C isoform has oncogenic properties, RASSF1A is a tumour suppressor frequently silenced by hypermethylation. Recently, the antisense long non-coding RNA RASSF1 (ANRASSF1) was implicated in a locus-specific mechanism for the RASSF1A epigenetic repression mediated by PRC2 (Polycomb Repressive Complex 2). Here, we evaluated the methylation patterns of the promoter regions of RASSF1A and RASSF1C and the expression levels of these RASSF1 transcripts in breast cancer and breast cancer cell lines. As expected, RASSF1C remained unmethylated and RASSF1A was hypermethylated at high frequencies in 75 primary breast cancers, and also in a panel of three mammary epithelial cells (MEC) and 10 breast cancer cell lines (BCC). Although RASSF1C was expressed in all cell lines, only two of them expressed the transcript RASSF1A. ANRASSF1 expression levels were increased in six BCCs. In vitro induced demethylation with 5-Aza-2ʹ-deoxicytydine (5-Aza-dC) resulted in up-regulation of RASSF1A and an inverse correlation with ANRASSF1 relative abundance in BCCs. However, increased levels of both transcripts were observed in two MECs (184A1 and MCF10A) after treatment with 5-Aza-dC. Overall, these findings indicate that ANRASSF1 is differentially expressed in MECs and BCCs. The lncRNA ANRASSF1 provides new perspectives as a therapeutic target for locus-specific regulation of RASSF1A.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T17:12:53Z
2019-10-06T17:12:53Z
2019-08-03
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/15592294.2019.1615355
Epigenetics, v. 14, n. 8, p. 741-750, 2019.
1559-2308
1559-2294
http://hdl.handle.net/11449/190427
10.1080/15592294.2019.1615355
2-s2.0-85067651745
8814823545159504
0000-0002-0285-1162
url http://dx.doi.org/10.1080/15592294.2019.1615355
http://hdl.handle.net/11449/190427
identifier_str_mv Epigenetics, v. 14, n. 8, p. 741-750, 2019.
1559-2308
1559-2294
10.1080/15592294.2019.1615355
2-s2.0-85067651745
8814823545159504
0000-0002-0285-1162
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Epigenetics
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 741-750
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1799965482909958144