The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1080/15592294.2019.1615355 http://hdl.handle.net/11449/190427 |
Resumo: | Alternative protein-coding transcripts of the RASSF1 gene have been associated with dual functions in human cancer: while RASSF1C isoform has oncogenic properties, RASSF1A is a tumour suppressor frequently silenced by hypermethylation. Recently, the antisense long non-coding RNA RASSF1 (ANRASSF1) was implicated in a locus-specific mechanism for the RASSF1A epigenetic repression mediated by PRC2 (Polycomb Repressive Complex 2). Here, we evaluated the methylation patterns of the promoter regions of RASSF1A and RASSF1C and the expression levels of these RASSF1 transcripts in breast cancer and breast cancer cell lines. As expected, RASSF1C remained unmethylated and RASSF1A was hypermethylated at high frequencies in 75 primary breast cancers, and also in a panel of three mammary epithelial cells (MEC) and 10 breast cancer cell lines (BCC). Although RASSF1C was expressed in all cell lines, only two of them expressed the transcript RASSF1A. ANRASSF1 expression levels were increased in six BCCs. In vitro induced demethylation with 5-Aza-2ʹ-deoxicytydine (5-Aza-dC) resulted in up-regulation of RASSF1A and an inverse correlation with ANRASSF1 relative abundance in BCCs. However, increased levels of both transcripts were observed in two MECs (184A1 and MCF10A) after treatment with 5-Aza-dC. Overall, these findings indicate that ANRASSF1 is differentially expressed in MECs and BCCs. The lncRNA ANRASSF1 provides new perspectives as a therapeutic target for locus-specific regulation of RASSF1A. |
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The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapyDNA methylationlncRNAlocus-specific epigenetic repressionRASSF1-AS1RASSF1ARASSF1CAlternative protein-coding transcripts of the RASSF1 gene have been associated with dual functions in human cancer: while RASSF1C isoform has oncogenic properties, RASSF1A is a tumour suppressor frequently silenced by hypermethylation. Recently, the antisense long non-coding RNA RASSF1 (ANRASSF1) was implicated in a locus-specific mechanism for the RASSF1A epigenetic repression mediated by PRC2 (Polycomb Repressive Complex 2). Here, we evaluated the methylation patterns of the promoter regions of RASSF1A and RASSF1C and the expression levels of these RASSF1 transcripts in breast cancer and breast cancer cell lines. As expected, RASSF1C remained unmethylated and RASSF1A was hypermethylated at high frequencies in 75 primary breast cancers, and also in a panel of three mammary epithelial cells (MEC) and 10 breast cancer cell lines (BCC). Although RASSF1C was expressed in all cell lines, only two of them expressed the transcript RASSF1A. ANRASSF1 expression levels were increased in six BCCs. In vitro induced demethylation with 5-Aza-2ʹ-deoxicytydine (5-Aza-dC) resulted in up-regulation of RASSF1A and an inverse correlation with ANRASSF1 relative abundance in BCCs. However, increased levels of both transcripts were observed in two MECs (184A1 and MCF10A) after treatment with 5-Aza-dC. Overall, these findings indicate that ANRASSF1 is differentially expressed in MECs and BCCs. The lncRNA ANRASSF1 provides new perspectives as a therapeutic target for locus-specific regulation of RASSF1A.Department of Genetics Institute of Biosciences São Paulo State University (Unesp)Department of Senology Amaral Carvalho HospitalDepartment of Biostatistics Institute of Biosciences São Paulo State University (Unesp)Department of Oncology Georgetown University Medical CenterFaculdades Pequeno Préncipe e Instituto de Pesquisa Pelé Pequeno PríncipeDepartment of Clinical Genetics University Hospital Institute of Regional Health Research University of Southern Denmark VejleDepartment of Genetics Institute of Biosciences São Paulo State University (Unesp)Department of Biostatistics Institute of Biosciences São Paulo State University (Unesp)Universidade Estadual Paulista (Unesp)Amaral Carvalho HospitalGeorgetown University Medical CenterFaculdades Pequeno Préncipe e Instituto de Pesquisa Pelé Pequeno PríncipeUniversity of Southern Denmark VejleCalanca, Naiade [UNESP]Paschoal, Ana Paula [UNESP]Munhoz, Érika Prando [UNESP]Galindo, Layla Testa [UNESP]Barbosa, Barbara Mitsuyasu [UNESP]Caldeira, José Roberto FígaroOliveira, Rogério Antonio [UNESP]Cavalli, Luciane ReginaRogatto, Silvia ReginaRainho, Cláudia Aparecida [UNESP]2019-10-06T17:12:53Z2019-10-06T17:12:53Z2019-08-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article741-750http://dx.doi.org/10.1080/15592294.2019.1615355Epigenetics, v. 14, n. 8, p. 741-750, 2019.1559-23081559-2294http://hdl.handle.net/11449/19042710.1080/15592294.2019.16153552-s2.0-8506765174588148235451595040000-0002-0285-1162Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengEpigeneticsinfo:eu-repo/semantics/openAccess2021-10-22T22:17:23Zoai:repositorio.unesp.br:11449/190427Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:53:01.470527Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
title |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
spellingShingle |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy Calanca, Naiade [UNESP] DNA methylation lncRNA locus-specific epigenetic repression RASSF1-AS1 RASSF1A RASSF1C |
title_short |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
title_full |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
title_fullStr |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
title_full_unstemmed |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
title_sort |
The long non-coding RNA ANRASSF1 in the regulation of alternative protein-coding transcripts RASSF1A and RASSF1C in human breast cancer cells: implications to epigenetic therapy |
author |
Calanca, Naiade [UNESP] |
author_facet |
Calanca, Naiade [UNESP] Paschoal, Ana Paula [UNESP] Munhoz, Érika Prando [UNESP] Galindo, Layla Testa [UNESP] Barbosa, Barbara Mitsuyasu [UNESP] Caldeira, José Roberto Fígaro Oliveira, Rogério Antonio [UNESP] Cavalli, Luciane Regina Rogatto, Silvia Regina Rainho, Cláudia Aparecida [UNESP] |
author_role |
author |
author2 |
Paschoal, Ana Paula [UNESP] Munhoz, Érika Prando [UNESP] Galindo, Layla Testa [UNESP] Barbosa, Barbara Mitsuyasu [UNESP] Caldeira, José Roberto Fígaro Oliveira, Rogério Antonio [UNESP] Cavalli, Luciane Regina Rogatto, Silvia Regina Rainho, Cláudia Aparecida [UNESP] |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Amaral Carvalho Hospital Georgetown University Medical Center Faculdades Pequeno Préncipe e Instituto de Pesquisa Pelé Pequeno Príncipe University of Southern Denmark Vejle |
dc.contributor.author.fl_str_mv |
Calanca, Naiade [UNESP] Paschoal, Ana Paula [UNESP] Munhoz, Érika Prando [UNESP] Galindo, Layla Testa [UNESP] Barbosa, Barbara Mitsuyasu [UNESP] Caldeira, José Roberto Fígaro Oliveira, Rogério Antonio [UNESP] Cavalli, Luciane Regina Rogatto, Silvia Regina Rainho, Cláudia Aparecida [UNESP] |
dc.subject.por.fl_str_mv |
DNA methylation lncRNA locus-specific epigenetic repression RASSF1-AS1 RASSF1A RASSF1C |
topic |
DNA methylation lncRNA locus-specific epigenetic repression RASSF1-AS1 RASSF1A RASSF1C |
description |
Alternative protein-coding transcripts of the RASSF1 gene have been associated with dual functions in human cancer: while RASSF1C isoform has oncogenic properties, RASSF1A is a tumour suppressor frequently silenced by hypermethylation. Recently, the antisense long non-coding RNA RASSF1 (ANRASSF1) was implicated in a locus-specific mechanism for the RASSF1A epigenetic repression mediated by PRC2 (Polycomb Repressive Complex 2). Here, we evaluated the methylation patterns of the promoter regions of RASSF1A and RASSF1C and the expression levels of these RASSF1 transcripts in breast cancer and breast cancer cell lines. As expected, RASSF1C remained unmethylated and RASSF1A was hypermethylated at high frequencies in 75 primary breast cancers, and also in a panel of three mammary epithelial cells (MEC) and 10 breast cancer cell lines (BCC). Although RASSF1C was expressed in all cell lines, only two of them expressed the transcript RASSF1A. ANRASSF1 expression levels were increased in six BCCs. In vitro induced demethylation with 5-Aza-2ʹ-deoxicytydine (5-Aza-dC) resulted in up-regulation of RASSF1A and an inverse correlation with ANRASSF1 relative abundance in BCCs. However, increased levels of both transcripts were observed in two MECs (184A1 and MCF10A) after treatment with 5-Aza-dC. Overall, these findings indicate that ANRASSF1 is differentially expressed in MECs and BCCs. The lncRNA ANRASSF1 provides new perspectives as a therapeutic target for locus-specific regulation of RASSF1A. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T17:12:53Z 2019-10-06T17:12:53Z 2019-08-03 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1080/15592294.2019.1615355 Epigenetics, v. 14, n. 8, p. 741-750, 2019. 1559-2308 1559-2294 http://hdl.handle.net/11449/190427 10.1080/15592294.2019.1615355 2-s2.0-85067651745 8814823545159504 0000-0002-0285-1162 |
url |
http://dx.doi.org/10.1080/15592294.2019.1615355 http://hdl.handle.net/11449/190427 |
identifier_str_mv |
Epigenetics, v. 14, n. 8, p. 741-750, 2019. 1559-2308 1559-2294 10.1080/15592294.2019.1615355 2-s2.0-85067651745 8814823545159504 0000-0002-0285-1162 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Epigenetics |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
741-750 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129369725468672 |