Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus

Detalhes bibliográficos
Autor(a) principal: Kirchhof, Sebastian
Data de Publicação: 2021
Outros Autores: Lyra, Mariana L. [UNESP], Rodriguez, Ariel, Ineich, Ivan, Mueller, Johannes, Roedel, Mark-Oliver, Trape, Jean-Francois, Vences, Miguel, Boissinot, Stephane
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-021-83422-7
http://hdl.handle.net/11449/209244
Resumo: Climate has a large impact on diversity and evolution of the world's biota. The Eocene-Oligocene transition from tropical climate to cooler, drier environments was accompanied by global species turnover. A large number of Old World lacertid lizard lineages have diversified after the Eocene-Oligocene boundary. One of the most speciose reptile genera in the arid Palearctic, Acanthodactylus, contains two sub-Saharan species with unresolved phylogenetic relationship and unknown climatic preferences. We here aim to understand how and when adaptation to arid conditions occurred in Acanthodactylus and when tropical habitats where entered. Using whole mitogenomes from fresh and archival DNA and published sequences we recovered a well-supported Acanthodactylus phylogeny and underpinned the timing of diversification with environmental niche analyses of the sub-Saharan species A. guineensis and A. boueti in comparison to all arid Acanthodactylus. We found that A. guineensis represents an old lineage that splits from a basal node in the Western clade, and A. boueti is a derived lineage and probably not its sister. Their long branches characterize them-and especially A. guineensis-as lineages that may have persisted for a long time without further diversification or have undergone multiple extinctions. Environmental niche models verified the occurrence of A. guineensis and A. boueti in hot humid environments different from the other 42 arid Acanthodactylus species. While A. guineensis probably remained in tropical habitat from periods prior to the Eocene-Oligocene boundary, A. boueti entered tropical environments independently at a later period. Our results provide an important baseline for studying adaptation and the transition from humid to arid environments in Lacertidae.
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spelling Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus AcanthodactylusClimate has a large impact on diversity and evolution of the world's biota. The Eocene-Oligocene transition from tropical climate to cooler, drier environments was accompanied by global species turnover. A large number of Old World lacertid lizard lineages have diversified after the Eocene-Oligocene boundary. One of the most speciose reptile genera in the arid Palearctic, Acanthodactylus, contains two sub-Saharan species with unresolved phylogenetic relationship and unknown climatic preferences. We here aim to understand how and when adaptation to arid conditions occurred in Acanthodactylus and when tropical habitats where entered. Using whole mitogenomes from fresh and archival DNA and published sequences we recovered a well-supported Acanthodactylus phylogeny and underpinned the timing of diversification with environmental niche analyses of the sub-Saharan species A. guineensis and A. boueti in comparison to all arid Acanthodactylus. We found that A. guineensis represents an old lineage that splits from a basal node in the Western clade, and A. boueti is a derived lineage and probably not its sister. Their long branches characterize them-and especially A. guineensis-as lineages that may have persisted for a long time without further diversification or have undergone multiple extinctions. Environmental niche models verified the occurrence of A. guineensis and A. boueti in hot humid environments different from the other 42 arid Acanthodactylus species. While A. guineensis probably remained in tropical habitat from periods prior to the Eocene-Oligocene boundary, A. boueti entered tropical environments independently at a later period. Our results provide an important baseline for studying adaptation and the transition from humid to arid environments in Lacertidae.Deutsche ForschungsgemeinschaftFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)MfN Taxonomy FundNYUADNYUAD Research InstituteNew York Univ Abu Dhabi, Abu Dhabi, Saadiyat Island, U Arab EmiratesUniv Estadual Paulista, Dept Biodiversidade, Inst Biociencias, BR-13506900 Rio Claro, SP, BrazilUniv Vet Med Hannover, Inst Zool, Bunteweg 17, D-30559 Hannover, GermanyUniv Antilles, Sorbonne Univ, Inst Systemat Evolut Biodivers ISYEB, Museum Natl Hist Nat,CNRS,Ecole Prat Hautes Etud, CP 30,57 Rue Cuvier, F-75005 Paris, FranceLeibniz Inst Evolut & Biodivers Sci, Museum Nat Kunde, Invalidenstr 43, D-10115 Berlin, GermanyIRD, UMR MIVEGEC, Lab Paludol & Zool Med, BP 1386, Dakar, SenegalTech Univ Carolo Wilhelmina Braunschweig, Zool Inst, Mendelssohnstr 4, D-38106 Braunschweig, GermanyUniv Estadual Paulista, Dept Biodiversidade, Inst Biociencias, BR-13506900 Rio Claro, SP, BrazilDeutsche Forschungsgemeinschaft: VE 247/11-1/MU 1760/9-1FAPESP: 2017/26162-8NYUAD: AD180NYUAD Research Institute: G1205ANature ResearchNew York Univ Abu DhabiUniversidade Estadual Paulista (Unesp)Univ Vet Med HannoverUniv AntillesLeibniz Inst Evolut & Biodivers SciIRDTech Univ Carolo Wilhelmina BraunschweigKirchhof, SebastianLyra, Mariana L. [UNESP]Rodriguez, ArielIneich, IvanMueller, JohannesRoedel, Mark-OliverTrape, Jean-FrancoisVences, MiguelBoissinot, Stephane2021-06-25T11:53:54Z2021-06-25T11:53:54Z2021-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article15http://dx.doi.org/10.1038/s41598-021-83422-7Scientific Reports. Berlin: Nature Research, v. 11, n. 1, 15 p., 2021.2045-2322http://hdl.handle.net/11449/20924410.1038/s41598-021-83422-7WOS:000625351100005Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2021-10-23T19:23:40Zoai:repositorio.unesp.br:11449/209244Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T16:16:28.907693Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
title Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
spellingShingle Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
Kirchhof, Sebastian
title_short Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
title_full Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
title_fullStr Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
title_full_unstemmed Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
title_sort Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophile lizard genus Acanthodactylus
author Kirchhof, Sebastian
author_facet Kirchhof, Sebastian
Lyra, Mariana L. [UNESP]
Rodriguez, Ariel
Ineich, Ivan
Mueller, Johannes
Roedel, Mark-Oliver
Trape, Jean-Francois
Vences, Miguel
Boissinot, Stephane
author_role author
author2 Lyra, Mariana L. [UNESP]
Rodriguez, Ariel
Ineich, Ivan
Mueller, Johannes
Roedel, Mark-Oliver
Trape, Jean-Francois
Vences, Miguel
Boissinot, Stephane
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv New York Univ Abu Dhabi
Universidade Estadual Paulista (Unesp)
Univ Vet Med Hannover
Univ Antilles
Leibniz Inst Evolut & Biodivers Sci
IRD
Tech Univ Carolo Wilhelmina Braunschweig
dc.contributor.author.fl_str_mv Kirchhof, Sebastian
Lyra, Mariana L. [UNESP]
Rodriguez, Ariel
Ineich, Ivan
Mueller, Johannes
Roedel, Mark-Oliver
Trape, Jean-Francois
Vences, Miguel
Boissinot, Stephane
description Climate has a large impact on diversity and evolution of the world's biota. The Eocene-Oligocene transition from tropical climate to cooler, drier environments was accompanied by global species turnover. A large number of Old World lacertid lizard lineages have diversified after the Eocene-Oligocene boundary. One of the most speciose reptile genera in the arid Palearctic, Acanthodactylus, contains two sub-Saharan species with unresolved phylogenetic relationship and unknown climatic preferences. We here aim to understand how and when adaptation to arid conditions occurred in Acanthodactylus and when tropical habitats where entered. Using whole mitogenomes from fresh and archival DNA and published sequences we recovered a well-supported Acanthodactylus phylogeny and underpinned the timing of diversification with environmental niche analyses of the sub-Saharan species A. guineensis and A. boueti in comparison to all arid Acanthodactylus. We found that A. guineensis represents an old lineage that splits from a basal node in the Western clade, and A. boueti is a derived lineage and probably not its sister. Their long branches characterize them-and especially A. guineensis-as lineages that may have persisted for a long time without further diversification or have undergone multiple extinctions. Environmental niche models verified the occurrence of A. guineensis and A. boueti in hot humid environments different from the other 42 arid Acanthodactylus species. While A. guineensis probably remained in tropical habitat from periods prior to the Eocene-Oligocene boundary, A. boueti entered tropical environments independently at a later period. Our results provide an important baseline for studying adaptation and the transition from humid to arid environments in Lacertidae.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25T11:53:54Z
2021-06-25T11:53:54Z
2021-03-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-021-83422-7
Scientific Reports. Berlin: Nature Research, v. 11, n. 1, 15 p., 2021.
2045-2322
http://hdl.handle.net/11449/209244
10.1038/s41598-021-83422-7
WOS:000625351100005
url http://dx.doi.org/10.1038/s41598-021-83422-7
http://hdl.handle.net/11449/209244
identifier_str_mv Scientific Reports. Berlin: Nature Research, v. 11, n. 1, 15 p., 2021.
2045-2322
10.1038/s41598-021-83422-7
WOS:000625351100005
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv 15
dc.publisher.none.fl_str_mv Nature Research
publisher.none.fl_str_mv Nature Research
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
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repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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