Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions

Detalhes bibliográficos
Autor(a) principal: Contiliani, Danyel Fernandes
Data de Publicação: 2022
Outros Autores: de Oliveira Nebó, João Felipe Carlos, Ribeiro, Rafael Vasconcelos, Andrade, Larissa Mara, Peixoto Júnior, Rafael Fávero, Lembke, Carolina Gimiliani, Machado, Ricardo Silverio, Silva, Daniel Nunes, Belloti, Mariana, de Souza, Gláucia Mendes, Perecin, Dilermando [UNESP], Pereira, Tiago Campos, de Matos Pires, Regina Célia, Fontoura, Patrícia Rezende, Landell, Marcos G. A., Figueira, Antonio, Creste, Silvana
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-022-13158-5
http://hdl.handle.net/11449/241665
Resumo: Drought is the most detrimental abiotic stress to sugarcane production. Nevertheless, transcriptomic analyses remain scarce for field-grown plants. Here we performed comparative transcriptional profiling of two contrasting sugarcane genotypes, ‘IACSP97-7065’ (drought-sensitive) and ‘IACSP94-2094’ (drought-tolerant) grown in a drought-prone environment. Physiological parameters and expression profiles were analyzed at 42 (May) and 117 (August) days after the last rainfall. The first sampling was done under mild drought (soil water potential of −60 kPa), while the second one was under severe drought (soil water potential of −75 kPa). Microarray analysis revealed a total of 622 differentially expressed genes in both sugarcane genotypes under mild and severe drought stress, uncovering about 250 exclusive transcripts to ‘IACSP94-2094’ involved in oxidoreductase activity, transcriptional regulation, metabolism of amino acids, and translation. Interestingly, the enhanced antioxidant system of ‘IACSP94-2094’ may protect photosystem II from oxidative damage, which partially ensures stable photochemical activity even after 117 days of water shortage. Moreover, the tolerant genotype shows a more extensive set of responsive transcription factors, promoting the fine-tuning of drought-related molecular pathways. These results help elucidate the intrinsic molecular mechanisms of a drought-tolerant sugarcane genotype to cope with ever-changing environments, including prolonged water deficit, and may be useful for plant breeding programs.
id UNSP_240c8a86018ae2c9db11eb0432a30ab7
oai_identifier_str oai:repositorio.unesp.br:11449/241665
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditionsDrought is the most detrimental abiotic stress to sugarcane production. Nevertheless, transcriptomic analyses remain scarce for field-grown plants. Here we performed comparative transcriptional profiling of two contrasting sugarcane genotypes, ‘IACSP97-7065’ (drought-sensitive) and ‘IACSP94-2094’ (drought-tolerant) grown in a drought-prone environment. Physiological parameters and expression profiles were analyzed at 42 (May) and 117 (August) days after the last rainfall. The first sampling was done under mild drought (soil water potential of −60 kPa), while the second one was under severe drought (soil water potential of −75 kPa). Microarray analysis revealed a total of 622 differentially expressed genes in both sugarcane genotypes under mild and severe drought stress, uncovering about 250 exclusive transcripts to ‘IACSP94-2094’ involved in oxidoreductase activity, transcriptional regulation, metabolism of amino acids, and translation. Interestingly, the enhanced antioxidant system of ‘IACSP94-2094’ may protect photosystem II from oxidative damage, which partially ensures stable photochemical activity even after 117 days of water shortage. Moreover, the tolerant genotype shows a more extensive set of responsive transcription factors, promoting the fine-tuning of drought-related molecular pathways. These results help elucidate the intrinsic molecular mechanisms of a drought-tolerant sugarcane genotype to cope with ever-changing environments, including prolonged water deficit, and may be useful for plant breeding programs.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Instituto Agronômico (IAC) Centro de CanaPrograma de Pós-Graduação em Genética Faculdade de Medicina de Ribeirão Preto Universidade de São PauloCentro de Energia Nuclear na Agricultura (CENA) Universidade de São PauloLaboratory of Crop Physiology Department of Plant Biology Institute of Biology University of CampinasDepartamento de Bioquímica Instituto de Química Universidade de São PauloInstituto Agronômico (IAC) Centro de Ecofisiologia e BiofísicaFaculdade de Ciências Agrárias e Veterinárias Universidade Estadual Paulista Júlio de Mesquita FilhoDepartamento de Biologia Faculdade de Filosofia Ciências e Letras de Ribeirão Preto Universidade de São PauloJalles Machado Sugar MillFaculdade de Ciências Agrárias e Veterinárias Universidade Estadual Paulista Júlio de Mesquita FilhoCAPES: 001FAPESP: 08/06446-2FAPESP: 2008/52146-0FAPESP: 2008/57923-5FAPESP: 2021/13478-2CNPq: 552381/2007-1Centro de CanaUniversidade de São Paulo (USP)Universidade Estadual de Campinas (UNICAMP)Centro de Ecofisiologia e BiofísicaUniversidade Estadual Paulista (UNESP)Jalles Machado Sugar MillContiliani, Danyel Fernandesde Oliveira Nebó, João Felipe CarlosRibeiro, Rafael VasconcelosAndrade, Larissa MaraPeixoto Júnior, Rafael FáveroLembke, Carolina GimilianiMachado, Ricardo SilverioSilva, Daniel NunesBelloti, Marianade Souza, Gláucia MendesPerecin, Dilermando [UNESP]Pereira, Tiago Camposde Matos Pires, Regina CéliaFontoura, Patrícia RezendeLandell, Marcos G. A.Figueira, AntonioCreste, Silvana2023-03-01T21:15:47Z2023-03-01T21:15:47Z2022-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-022-13158-5Scientific Reports, v. 12, n. 1, 2022.2045-2322http://hdl.handle.net/11449/24166510.1038/s41598-022-13158-52-s2.0-85131137420Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2023-03-01T21:15:48Zoai:repositorio.unesp.br:11449/241665Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:43:19.876184Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
title Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
spellingShingle Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
Contiliani, Danyel Fernandes
title_short Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
title_full Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
title_fullStr Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
title_full_unstemmed Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
title_sort Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
author Contiliani, Danyel Fernandes
author_facet Contiliani, Danyel Fernandes
de Oliveira Nebó, João Felipe Carlos
Ribeiro, Rafael Vasconcelos
Andrade, Larissa Mara
Peixoto Júnior, Rafael Fávero
Lembke, Carolina Gimiliani
Machado, Ricardo Silverio
Silva, Daniel Nunes
Belloti, Mariana
de Souza, Gláucia Mendes
Perecin, Dilermando [UNESP]
Pereira, Tiago Campos
de Matos Pires, Regina Célia
Fontoura, Patrícia Rezende
Landell, Marcos G. A.
Figueira, Antonio
Creste, Silvana
author_role author
author2 de Oliveira Nebó, João Felipe Carlos
Ribeiro, Rafael Vasconcelos
Andrade, Larissa Mara
Peixoto Júnior, Rafael Fávero
Lembke, Carolina Gimiliani
Machado, Ricardo Silverio
Silva, Daniel Nunes
Belloti, Mariana
de Souza, Gláucia Mendes
Perecin, Dilermando [UNESP]
Pereira, Tiago Campos
de Matos Pires, Regina Célia
Fontoura, Patrícia Rezende
Landell, Marcos G. A.
Figueira, Antonio
Creste, Silvana
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Centro de Cana
Universidade de São Paulo (USP)
Universidade Estadual de Campinas (UNICAMP)
Centro de Ecofisiologia e Biofísica
Universidade Estadual Paulista (UNESP)
Jalles Machado Sugar Mill
dc.contributor.author.fl_str_mv Contiliani, Danyel Fernandes
de Oliveira Nebó, João Felipe Carlos
Ribeiro, Rafael Vasconcelos
Andrade, Larissa Mara
Peixoto Júnior, Rafael Fávero
Lembke, Carolina Gimiliani
Machado, Ricardo Silverio
Silva, Daniel Nunes
Belloti, Mariana
de Souza, Gláucia Mendes
Perecin, Dilermando [UNESP]
Pereira, Tiago Campos
de Matos Pires, Regina Célia
Fontoura, Patrícia Rezende
Landell, Marcos G. A.
Figueira, Antonio
Creste, Silvana
description Drought is the most detrimental abiotic stress to sugarcane production. Nevertheless, transcriptomic analyses remain scarce for field-grown plants. Here we performed comparative transcriptional profiling of two contrasting sugarcane genotypes, ‘IACSP97-7065’ (drought-sensitive) and ‘IACSP94-2094’ (drought-tolerant) grown in a drought-prone environment. Physiological parameters and expression profiles were analyzed at 42 (May) and 117 (August) days after the last rainfall. The first sampling was done under mild drought (soil water potential of −60 kPa), while the second one was under severe drought (soil water potential of −75 kPa). Microarray analysis revealed a total of 622 differentially expressed genes in both sugarcane genotypes under mild and severe drought stress, uncovering about 250 exclusive transcripts to ‘IACSP94-2094’ involved in oxidoreductase activity, transcriptional regulation, metabolism of amino acids, and translation. Interestingly, the enhanced antioxidant system of ‘IACSP94-2094’ may protect photosystem II from oxidative damage, which partially ensures stable photochemical activity even after 117 days of water shortage. Moreover, the tolerant genotype shows a more extensive set of responsive transcription factors, promoting the fine-tuning of drought-related molecular pathways. These results help elucidate the intrinsic molecular mechanisms of a drought-tolerant sugarcane genotype to cope with ever-changing environments, including prolonged water deficit, and may be useful for plant breeding programs.
publishDate 2022
dc.date.none.fl_str_mv 2022-12-01
2023-03-01T21:15:47Z
2023-03-01T21:15:47Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-022-13158-5
Scientific Reports, v. 12, n. 1, 2022.
2045-2322
http://hdl.handle.net/11449/241665
10.1038/s41598-022-13158-5
2-s2.0-85131137420
url http://dx.doi.org/10.1038/s41598-022-13158-5
http://hdl.handle.net/11449/241665
identifier_str_mv Scientific Reports, v. 12, n. 1, 2022.
2045-2322
10.1038/s41598-022-13158-5
2-s2.0-85131137420
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129545920839680