Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1038/s41598-022-13158-5 http://hdl.handle.net/11449/241665 |
Resumo: | Drought is the most detrimental abiotic stress to sugarcane production. Nevertheless, transcriptomic analyses remain scarce for field-grown plants. Here we performed comparative transcriptional profiling of two contrasting sugarcane genotypes, ‘IACSP97-7065’ (drought-sensitive) and ‘IACSP94-2094’ (drought-tolerant) grown in a drought-prone environment. Physiological parameters and expression profiles were analyzed at 42 (May) and 117 (August) days after the last rainfall. The first sampling was done under mild drought (soil water potential of −60 kPa), while the second one was under severe drought (soil water potential of −75 kPa). Microarray analysis revealed a total of 622 differentially expressed genes in both sugarcane genotypes under mild and severe drought stress, uncovering about 250 exclusive transcripts to ‘IACSP94-2094’ involved in oxidoreductase activity, transcriptional regulation, metabolism of amino acids, and translation. Interestingly, the enhanced antioxidant system of ‘IACSP94-2094’ may protect photosystem II from oxidative damage, which partially ensures stable photochemical activity even after 117 days of water shortage. Moreover, the tolerant genotype shows a more extensive set of responsive transcription factors, promoting the fine-tuning of drought-related molecular pathways. These results help elucidate the intrinsic molecular mechanisms of a drought-tolerant sugarcane genotype to cope with ever-changing environments, including prolonged water deficit, and may be useful for plant breeding programs. |
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Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditionsDrought is the most detrimental abiotic stress to sugarcane production. Nevertheless, transcriptomic analyses remain scarce for field-grown plants. Here we performed comparative transcriptional profiling of two contrasting sugarcane genotypes, ‘IACSP97-7065’ (drought-sensitive) and ‘IACSP94-2094’ (drought-tolerant) grown in a drought-prone environment. Physiological parameters and expression profiles were analyzed at 42 (May) and 117 (August) days after the last rainfall. The first sampling was done under mild drought (soil water potential of −60 kPa), while the second one was under severe drought (soil water potential of −75 kPa). Microarray analysis revealed a total of 622 differentially expressed genes in both sugarcane genotypes under mild and severe drought stress, uncovering about 250 exclusive transcripts to ‘IACSP94-2094’ involved in oxidoreductase activity, transcriptional regulation, metabolism of amino acids, and translation. Interestingly, the enhanced antioxidant system of ‘IACSP94-2094’ may protect photosystem II from oxidative damage, which partially ensures stable photochemical activity even after 117 days of water shortage. Moreover, the tolerant genotype shows a more extensive set of responsive transcription factors, promoting the fine-tuning of drought-related molecular pathways. These results help elucidate the intrinsic molecular mechanisms of a drought-tolerant sugarcane genotype to cope with ever-changing environments, including prolonged water deficit, and may be useful for plant breeding programs.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Instituto Agronômico (IAC) Centro de CanaPrograma de Pós-Graduação em Genética Faculdade de Medicina de Ribeirão Preto Universidade de São PauloCentro de Energia Nuclear na Agricultura (CENA) Universidade de São PauloLaboratory of Crop Physiology Department of Plant Biology Institute of Biology University of CampinasDepartamento de Bioquímica Instituto de Química Universidade de São PauloInstituto Agronômico (IAC) Centro de Ecofisiologia e BiofísicaFaculdade de Ciências Agrárias e Veterinárias Universidade Estadual Paulista Júlio de Mesquita FilhoDepartamento de Biologia Faculdade de Filosofia Ciências e Letras de Ribeirão Preto Universidade de São PauloJalles Machado Sugar MillFaculdade de Ciências Agrárias e Veterinárias Universidade Estadual Paulista Júlio de Mesquita FilhoCAPES: 001FAPESP: 08/06446-2FAPESP: 2008/52146-0FAPESP: 2008/57923-5FAPESP: 2021/13478-2CNPq: 552381/2007-1Centro de CanaUniversidade de São Paulo (USP)Universidade Estadual de Campinas (UNICAMP)Centro de Ecofisiologia e BiofísicaUniversidade Estadual Paulista (UNESP)Jalles Machado Sugar MillContiliani, Danyel Fernandesde Oliveira Nebó, João Felipe CarlosRibeiro, Rafael VasconcelosAndrade, Larissa MaraPeixoto Júnior, Rafael FáveroLembke, Carolina GimilianiMachado, Ricardo SilverioSilva, Daniel NunesBelloti, Marianade Souza, Gláucia MendesPerecin, Dilermando [UNESP]Pereira, Tiago Camposde Matos Pires, Regina CéliaFontoura, Patrícia RezendeLandell, Marcos G. A.Figueira, AntonioCreste, Silvana2023-03-01T21:15:47Z2023-03-01T21:15:47Z2022-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-022-13158-5Scientific Reports, v. 12, n. 1, 2022.2045-2322http://hdl.handle.net/11449/24166510.1038/s41598-022-13158-52-s2.0-85131137420Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2023-03-01T21:15:48Zoai:repositorio.unesp.br:11449/241665Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:43:19.876184Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
title |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
spellingShingle |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions Contiliani, Danyel Fernandes |
title_short |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
title_full |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
title_fullStr |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
title_full_unstemmed |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
title_sort |
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions |
author |
Contiliani, Danyel Fernandes |
author_facet |
Contiliani, Danyel Fernandes de Oliveira Nebó, João Felipe Carlos Ribeiro, Rafael Vasconcelos Andrade, Larissa Mara Peixoto Júnior, Rafael Fávero Lembke, Carolina Gimiliani Machado, Ricardo Silverio Silva, Daniel Nunes Belloti, Mariana de Souza, Gláucia Mendes Perecin, Dilermando [UNESP] Pereira, Tiago Campos de Matos Pires, Regina Célia Fontoura, Patrícia Rezende Landell, Marcos G. A. Figueira, Antonio Creste, Silvana |
author_role |
author |
author2 |
de Oliveira Nebó, João Felipe Carlos Ribeiro, Rafael Vasconcelos Andrade, Larissa Mara Peixoto Júnior, Rafael Fávero Lembke, Carolina Gimiliani Machado, Ricardo Silverio Silva, Daniel Nunes Belloti, Mariana de Souza, Gláucia Mendes Perecin, Dilermando [UNESP] Pereira, Tiago Campos de Matos Pires, Regina Célia Fontoura, Patrícia Rezende Landell, Marcos G. A. Figueira, Antonio Creste, Silvana |
author2_role |
author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Centro de Cana Universidade de São Paulo (USP) Universidade Estadual de Campinas (UNICAMP) Centro de Ecofisiologia e Biofísica Universidade Estadual Paulista (UNESP) Jalles Machado Sugar Mill |
dc.contributor.author.fl_str_mv |
Contiliani, Danyel Fernandes de Oliveira Nebó, João Felipe Carlos Ribeiro, Rafael Vasconcelos Andrade, Larissa Mara Peixoto Júnior, Rafael Fávero Lembke, Carolina Gimiliani Machado, Ricardo Silverio Silva, Daniel Nunes Belloti, Mariana de Souza, Gláucia Mendes Perecin, Dilermando [UNESP] Pereira, Tiago Campos de Matos Pires, Regina Célia Fontoura, Patrícia Rezende Landell, Marcos G. A. Figueira, Antonio Creste, Silvana |
description |
Drought is the most detrimental abiotic stress to sugarcane production. Nevertheless, transcriptomic analyses remain scarce for field-grown plants. Here we performed comparative transcriptional profiling of two contrasting sugarcane genotypes, ‘IACSP97-7065’ (drought-sensitive) and ‘IACSP94-2094’ (drought-tolerant) grown in a drought-prone environment. Physiological parameters and expression profiles were analyzed at 42 (May) and 117 (August) days after the last rainfall. The first sampling was done under mild drought (soil water potential of −60 kPa), while the second one was under severe drought (soil water potential of −75 kPa). Microarray analysis revealed a total of 622 differentially expressed genes in both sugarcane genotypes under mild and severe drought stress, uncovering about 250 exclusive transcripts to ‘IACSP94-2094’ involved in oxidoreductase activity, transcriptional regulation, metabolism of amino acids, and translation. Interestingly, the enhanced antioxidant system of ‘IACSP94-2094’ may protect photosystem II from oxidative damage, which partially ensures stable photochemical activity even after 117 days of water shortage. Moreover, the tolerant genotype shows a more extensive set of responsive transcription factors, promoting the fine-tuning of drought-related molecular pathways. These results help elucidate the intrinsic molecular mechanisms of a drought-tolerant sugarcane genotype to cope with ever-changing environments, including prolonged water deficit, and may be useful for plant breeding programs. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-12-01 2023-03-01T21:15:47Z 2023-03-01T21:15:47Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1038/s41598-022-13158-5 Scientific Reports, v. 12, n. 1, 2022. 2045-2322 http://hdl.handle.net/11449/241665 10.1038/s41598-022-13158-5 2-s2.0-85131137420 |
url |
http://dx.doi.org/10.1038/s41598-022-13158-5 http://hdl.handle.net/11449/241665 |
identifier_str_mv |
Scientific Reports, v. 12, n. 1, 2022. 2045-2322 10.1038/s41598-022-13158-5 2-s2.0-85131137420 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Scientific Reports |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129545920839680 |