Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation

Detalhes bibliográficos
Autor(a) principal: Badial, Peres Ramos [UNESP]
Data de Publicação: 2018
Outros Autores: Teixeira, Raffaella Bertoni Cavalcanti, Delfiol, Diego José Zanzarini, da Mota, Ligia Souza Lima Silveira [UNESP], Borges, Alexandre Secorun [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.mcp.2018.08.002
http://hdl.handle.net/11449/176702
Resumo: Overo lethal white foal syndrome (OLWFS) is a genetic disorder caused by a dinucleotide mutation in the endothelin receptor type B (EDNRB) gene leading to the death of affected foals shortly after birth. The use of rapid and reliable genetic testing is imperative for the early diagnosis of the mutation avoiding, therefore, either additional suffering or the production of affected animals. In the present study, we developed and validated a high-resolution melting (HRM) genotyping assay to detect the OLWFS causative mutation, and we also determined the frequency of heterozygotes among American Paint horses in Brazil. The HRM genotyping assay resulted in a high sensitivity, specificity, and positive and negative predictive values. The overall estimated frequency of heterozygotes was 21.6%; however, this frequency increased to 89.5% when considering only overo horses. The HRM assay optimized here was a reliable and suitable method for the detection of the dinucleotide mutation observed in the EDNRB gene resulting in a fast, accurate, and precise diagnostic tool. The causative gene mutation of OLWFS is present in heterozygosity in the American Paint Horse population in Brazil and is highly frequent among overo horses.
id UNSP_25467eaab868fb934424c18ed135d5cc
oai_identifier_str oai:repositorio.unesp.br:11449/176702
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimationEndothelin receptor type BFrequency of heterozygotesGenotypingHigh resolution melting analysisOvero lethal white foal syndromeOvero lethal white foal syndrome (OLWFS) is a genetic disorder caused by a dinucleotide mutation in the endothelin receptor type B (EDNRB) gene leading to the death of affected foals shortly after birth. The use of rapid and reliable genetic testing is imperative for the early diagnosis of the mutation avoiding, therefore, either additional suffering or the production of affected animals. In the present study, we developed and validated a high-resolution melting (HRM) genotyping assay to detect the OLWFS causative mutation, and we also determined the frequency of heterozygotes among American Paint horses in Brazil. The HRM genotyping assay resulted in a high sensitivity, specificity, and positive and negative predictive values. The overall estimated frequency of heterozygotes was 21.6%; however, this frequency increased to 89.5% when considering only overo horses. The HRM assay optimized here was a reliable and suitable method for the detection of the dinucleotide mutation observed in the EDNRB gene resulting in a fast, accurate, and precise diagnostic tool. The causative gene mutation of OLWFS is present in heterozygosity in the American Paint Horse population in Brazil and is highly frequent among overo horses.Department of Veterinary Clinical Science School of Veterinary Medicine and Animal Science UNESP - Univ Estadual PaulistaDepartment of Pathobiology and Population Medicine College of Veterinary Medicine Mississippi State University, 240 Wise Center DriveVeterinary Clinic and Surgery Department (DCCV) UFMG Veterinary College Universidade Federal de Minas Gerais UFMGFaculdade de Medicina Veterinária Universidade Federal de Uberlândia Campus UmuaramaDepartment of Genetics Institute of Biosciences UNESP - Univ Estadual PaulistaDepartment of Veterinary Clinical Science School of Veterinary Medicine and Animal Science UNESP - Univ Estadual PaulistaDepartment of Genetics Institute of Biosciences UNESP - Univ Estadual PaulistaUniversidade Estadual Paulista (Unesp)Mississippi State UniversityUniversidade Federal de Minas Gerais (UFMG)Universidade Federal de Uberlândia (UFU)Badial, Peres Ramos [UNESP]Teixeira, Raffaella Bertoni CavalcantiDelfiol, Diego José Zanzarinida Mota, Ligia Souza Lima Silveira [UNESP]Borges, Alexandre Secorun [UNESP]2018-12-11T17:22:08Z2018-12-11T17:22:08Z2018-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article52-56application/pdfhttp://dx.doi.org/10.1016/j.mcp.2018.08.002Molecular and Cellular Probes, v. 41, p. 52-56.1096-11940890-8508http://hdl.handle.net/11449/17670210.1016/j.mcp.2018.08.0022-s2.0-850513664452-s2.0-85051366445.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular and Cellular Probes0,6170,617info:eu-repo/semantics/openAccess2023-10-12T06:04:04Zoai:repositorio.unesp.br:11449/176702Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:40:31.823075Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
title Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
spellingShingle Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
Badial, Peres Ramos [UNESP]
Endothelin receptor type B
Frequency of heterozygotes
Genotyping
High resolution melting analysis
Overo lethal white foal syndrome
title_short Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
title_full Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
title_fullStr Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
title_full_unstemmed Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
title_sort Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
author Badial, Peres Ramos [UNESP]
author_facet Badial, Peres Ramos [UNESP]
Teixeira, Raffaella Bertoni Cavalcanti
Delfiol, Diego José Zanzarini
da Mota, Ligia Souza Lima Silveira [UNESP]
Borges, Alexandre Secorun [UNESP]
author_role author
author2 Teixeira, Raffaella Bertoni Cavalcanti
Delfiol, Diego José Zanzarini
da Mota, Ligia Souza Lima Silveira [UNESP]
Borges, Alexandre Secorun [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Mississippi State University
Universidade Federal de Minas Gerais (UFMG)
Universidade Federal de Uberlândia (UFU)
dc.contributor.author.fl_str_mv Badial, Peres Ramos [UNESP]
Teixeira, Raffaella Bertoni Cavalcanti
Delfiol, Diego José Zanzarini
da Mota, Ligia Souza Lima Silveira [UNESP]
Borges, Alexandre Secorun [UNESP]
dc.subject.por.fl_str_mv Endothelin receptor type B
Frequency of heterozygotes
Genotyping
High resolution melting analysis
Overo lethal white foal syndrome
topic Endothelin receptor type B
Frequency of heterozygotes
Genotyping
High resolution melting analysis
Overo lethal white foal syndrome
description Overo lethal white foal syndrome (OLWFS) is a genetic disorder caused by a dinucleotide mutation in the endothelin receptor type B (EDNRB) gene leading to the death of affected foals shortly after birth. The use of rapid and reliable genetic testing is imperative for the early diagnosis of the mutation avoiding, therefore, either additional suffering or the production of affected animals. In the present study, we developed and validated a high-resolution melting (HRM) genotyping assay to detect the OLWFS causative mutation, and we also determined the frequency of heterozygotes among American Paint horses in Brazil. The HRM genotyping assay resulted in a high sensitivity, specificity, and positive and negative predictive values. The overall estimated frequency of heterozygotes was 21.6%; however, this frequency increased to 89.5% when considering only overo horses. The HRM assay optimized here was a reliable and suitable method for the detection of the dinucleotide mutation observed in the EDNRB gene resulting in a fast, accurate, and precise diagnostic tool. The causative gene mutation of OLWFS is present in heterozygosity in the American Paint Horse population in Brazil and is highly frequent among overo horses.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-11T17:22:08Z
2018-12-11T17:22:08Z
2018-10-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.mcp.2018.08.002
Molecular and Cellular Probes, v. 41, p. 52-56.
1096-1194
0890-8508
http://hdl.handle.net/11449/176702
10.1016/j.mcp.2018.08.002
2-s2.0-85051366445
2-s2.0-85051366445.pdf
url http://dx.doi.org/10.1016/j.mcp.2018.08.002
http://hdl.handle.net/11449/176702
identifier_str_mv Molecular and Cellular Probes, v. 41, p. 52-56.
1096-1194
0890-8508
10.1016/j.mcp.2018.08.002
2-s2.0-85051366445
2-s2.0-85051366445.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Molecular and Cellular Probes
0,617
0,617
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 52-56
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808128398493483008