Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.mcp.2018.08.002 http://hdl.handle.net/11449/176702 |
Resumo: | Overo lethal white foal syndrome (OLWFS) is a genetic disorder caused by a dinucleotide mutation in the endothelin receptor type B (EDNRB) gene leading to the death of affected foals shortly after birth. The use of rapid and reliable genetic testing is imperative for the early diagnosis of the mutation avoiding, therefore, either additional suffering or the production of affected animals. In the present study, we developed and validated a high-resolution melting (HRM) genotyping assay to detect the OLWFS causative mutation, and we also determined the frequency of heterozygotes among American Paint horses in Brazil. The HRM genotyping assay resulted in a high sensitivity, specificity, and positive and negative predictive values. The overall estimated frequency of heterozygotes was 21.6%; however, this frequency increased to 89.5% when considering only overo horses. The HRM assay optimized here was a reliable and suitable method for the detection of the dinucleotide mutation observed in the EDNRB gene resulting in a fast, accurate, and precise diagnostic tool. The causative gene mutation of OLWFS is present in heterozygosity in the American Paint Horse population in Brazil and is highly frequent among overo horses. |
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Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimationEndothelin receptor type BFrequency of heterozygotesGenotypingHigh resolution melting analysisOvero lethal white foal syndromeOvero lethal white foal syndrome (OLWFS) is a genetic disorder caused by a dinucleotide mutation in the endothelin receptor type B (EDNRB) gene leading to the death of affected foals shortly after birth. The use of rapid and reliable genetic testing is imperative for the early diagnosis of the mutation avoiding, therefore, either additional suffering or the production of affected animals. In the present study, we developed and validated a high-resolution melting (HRM) genotyping assay to detect the OLWFS causative mutation, and we also determined the frequency of heterozygotes among American Paint horses in Brazil. The HRM genotyping assay resulted in a high sensitivity, specificity, and positive and negative predictive values. The overall estimated frequency of heterozygotes was 21.6%; however, this frequency increased to 89.5% when considering only overo horses. The HRM assay optimized here was a reliable and suitable method for the detection of the dinucleotide mutation observed in the EDNRB gene resulting in a fast, accurate, and precise diagnostic tool. The causative gene mutation of OLWFS is present in heterozygosity in the American Paint Horse population in Brazil and is highly frequent among overo horses.Department of Veterinary Clinical Science School of Veterinary Medicine and Animal Science UNESP - Univ Estadual PaulistaDepartment of Pathobiology and Population Medicine College of Veterinary Medicine Mississippi State University, 240 Wise Center DriveVeterinary Clinic and Surgery Department (DCCV) UFMG Veterinary College Universidade Federal de Minas Gerais UFMGFaculdade de Medicina Veterinária Universidade Federal de Uberlândia Campus UmuaramaDepartment of Genetics Institute of Biosciences UNESP - Univ Estadual PaulistaDepartment of Veterinary Clinical Science School of Veterinary Medicine and Animal Science UNESP - Univ Estadual PaulistaDepartment of Genetics Institute of Biosciences UNESP - Univ Estadual PaulistaUniversidade Estadual Paulista (Unesp)Mississippi State UniversityUniversidade Federal de Minas Gerais (UFMG)Universidade Federal de Uberlândia (UFU)Badial, Peres Ramos [UNESP]Teixeira, Raffaella Bertoni CavalcantiDelfiol, Diego José Zanzarinida Mota, Ligia Souza Lima Silveira [UNESP]Borges, Alexandre Secorun [UNESP]2018-12-11T17:22:08Z2018-12-11T17:22:08Z2018-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article52-56application/pdfhttp://dx.doi.org/10.1016/j.mcp.2018.08.002Molecular and Cellular Probes, v. 41, p. 52-56.1096-11940890-8508http://hdl.handle.net/11449/17670210.1016/j.mcp.2018.08.0022-s2.0-850513664452-s2.0-85051366445.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular and Cellular Probes0,6170,617info:eu-repo/semantics/openAccess2023-10-12T06:04:04Zoai:repositorio.unesp.br:11449/176702Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:40:31.823075Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
title |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
spellingShingle |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation Badial, Peres Ramos [UNESP] Endothelin receptor type B Frequency of heterozygotes Genotyping High resolution melting analysis Overo lethal white foal syndrome |
title_short |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
title_full |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
title_fullStr |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
title_full_unstemmed |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
title_sort |
Validation of high-resolution melting analysis as a diagnostic tool for endothelin receptor B mutation in American Paint horses and allele frequency estimation |
author |
Badial, Peres Ramos [UNESP] |
author_facet |
Badial, Peres Ramos [UNESP] Teixeira, Raffaella Bertoni Cavalcanti Delfiol, Diego José Zanzarini da Mota, Ligia Souza Lima Silveira [UNESP] Borges, Alexandre Secorun [UNESP] |
author_role |
author |
author2 |
Teixeira, Raffaella Bertoni Cavalcanti Delfiol, Diego José Zanzarini da Mota, Ligia Souza Lima Silveira [UNESP] Borges, Alexandre Secorun [UNESP] |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Mississippi State University Universidade Federal de Minas Gerais (UFMG) Universidade Federal de Uberlândia (UFU) |
dc.contributor.author.fl_str_mv |
Badial, Peres Ramos [UNESP] Teixeira, Raffaella Bertoni Cavalcanti Delfiol, Diego José Zanzarini da Mota, Ligia Souza Lima Silveira [UNESP] Borges, Alexandre Secorun [UNESP] |
dc.subject.por.fl_str_mv |
Endothelin receptor type B Frequency of heterozygotes Genotyping High resolution melting analysis Overo lethal white foal syndrome |
topic |
Endothelin receptor type B Frequency of heterozygotes Genotyping High resolution melting analysis Overo lethal white foal syndrome |
description |
Overo lethal white foal syndrome (OLWFS) is a genetic disorder caused by a dinucleotide mutation in the endothelin receptor type B (EDNRB) gene leading to the death of affected foals shortly after birth. The use of rapid and reliable genetic testing is imperative for the early diagnosis of the mutation avoiding, therefore, either additional suffering or the production of affected animals. In the present study, we developed and validated a high-resolution melting (HRM) genotyping assay to detect the OLWFS causative mutation, and we also determined the frequency of heterozygotes among American Paint horses in Brazil. The HRM genotyping assay resulted in a high sensitivity, specificity, and positive and negative predictive values. The overall estimated frequency of heterozygotes was 21.6%; however, this frequency increased to 89.5% when considering only overo horses. The HRM assay optimized here was a reliable and suitable method for the detection of the dinucleotide mutation observed in the EDNRB gene resulting in a fast, accurate, and precise diagnostic tool. The causative gene mutation of OLWFS is present in heterozygosity in the American Paint Horse population in Brazil and is highly frequent among overo horses. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-12-11T17:22:08Z 2018-12-11T17:22:08Z 2018-10-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.mcp.2018.08.002 Molecular and Cellular Probes, v. 41, p. 52-56. 1096-1194 0890-8508 http://hdl.handle.net/11449/176702 10.1016/j.mcp.2018.08.002 2-s2.0-85051366445 2-s2.0-85051366445.pdf |
url |
http://dx.doi.org/10.1016/j.mcp.2018.08.002 http://hdl.handle.net/11449/176702 |
identifier_str_mv |
Molecular and Cellular Probes, v. 41, p. 52-56. 1096-1194 0890-8508 10.1016/j.mcp.2018.08.002 2-s2.0-85051366445 2-s2.0-85051366445.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Molecular and Cellular Probes 0,617 0,617 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
52-56 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128398493483008 |