Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.ijbiomac.2015.11.026 http://hdl.handle.net/11449/172299 |
Resumo: | Southern bean mosaic virus (SBMV) RNA purified from infected plants was used for cloning the viral genome-linked protein (VPg) and was subsequently expressed in Escherichia coli. Circular dichroism (CD), dynamic light scattering (DLS) and saturation transfer difference (STD) by nuclear magnetic resonance (NMR) measurements were employed to determine the degree of monodispersity and to investigate the conformational changes in the absence and presence of trifluoroethanol (TFE) which indicated increased helical content with increasing concentration of TFE. 8-Anilino-1-naphthalenesulfonic acid (ANS) was used as a probe to compare the unfolding regions of the protein before and after addition of TFE. The results indicated that although the TFE concentration influences VPg folding, it does not play a role in nucleotide binding and that the local solvent hydrophobicity causes significant conformational changes. |
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Repositório Institucional da UNESP |
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Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFEExpressionPurificationViral genome-linked proteinVPgSouthern bean mosaic virus (SBMV) RNA purified from infected plants was used for cloning the viral genome-linked protein (VPg) and was subsequently expressed in Escherichia coli. Circular dichroism (CD), dynamic light scattering (DLS) and saturation transfer difference (STD) by nuclear magnetic resonance (NMR) measurements were employed to determine the degree of monodispersity and to investigate the conformational changes in the absence and presence of trifluoroethanol (TFE) which indicated increased helical content with increasing concentration of TFE. 8-Anilino-1-naphthalenesulfonic acid (ANS) was used as a probe to compare the unfolding regions of the protein before and after addition of TFE. The results indicated that although the TFE concentration influences VPg folding, it does not play a role in nucleotide binding and that the local solvent hydrophobicity causes significant conformational changes.Multiuser Center for Biomolecular Innovation IBILCE/UNESPDepartment of Physics IBILCE/UNESPLaboratory for Structural Biology of Infection and Inflammation Hamburg UniversityMultiuser Center for Biomolecular Innovation IBILCE/UNESPDepartment of Physics IBILCE/UNESPUniversidade Estadual Paulista (Unesp)Hamburg UniversityMariutti, R. B. [UNESP]Caruso, I. P. [UNESP]Ullah, A. [UNESP]De Morais, F. R. [UNESP]Rehders, D.Arni, R. K. [UNESP]2018-12-11T16:59:35Z2018-12-11T16:59:35Z2016-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article178-184application/pdfhttp://dx.doi.org/10.1016/j.ijbiomac.2015.11.026International Journal of Biological Macromolecules, v. 83, p. 178-184.1879-00030141-8130http://hdl.handle.net/11449/17229910.1016/j.ijbiomac.2015.11.0262-s2.0-849497883832-s2.0-84949788383.pdf91625089789458870000-0003-2460-1145Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal of Biological Macromolecules0,917info:eu-repo/semantics/openAccess2023-10-06T06:09:32Zoai:repositorio.unesp.br:11449/172299Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:11:24.723214Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
title |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
spellingShingle |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE Mariutti, R. B. [UNESP] Expression Purification Viral genome-linked protein VPg |
title_short |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
title_full |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
title_fullStr |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
title_full_unstemmed |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
title_sort |
Functional expression, monodispersity and conformational changes in the SBMV virus viral VPg on binding TFE |
author |
Mariutti, R. B. [UNESP] |
author_facet |
Mariutti, R. B. [UNESP] Caruso, I. P. [UNESP] Ullah, A. [UNESP] De Morais, F. R. [UNESP] Rehders, D. Arni, R. K. [UNESP] |
author_role |
author |
author2 |
Caruso, I. P. [UNESP] Ullah, A. [UNESP] De Morais, F. R. [UNESP] Rehders, D. Arni, R. K. [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Hamburg University |
dc.contributor.author.fl_str_mv |
Mariutti, R. B. [UNESP] Caruso, I. P. [UNESP] Ullah, A. [UNESP] De Morais, F. R. [UNESP] Rehders, D. Arni, R. K. [UNESP] |
dc.subject.por.fl_str_mv |
Expression Purification Viral genome-linked protein VPg |
topic |
Expression Purification Viral genome-linked protein VPg |
description |
Southern bean mosaic virus (SBMV) RNA purified from infected plants was used for cloning the viral genome-linked protein (VPg) and was subsequently expressed in Escherichia coli. Circular dichroism (CD), dynamic light scattering (DLS) and saturation transfer difference (STD) by nuclear magnetic resonance (NMR) measurements were employed to determine the degree of monodispersity and to investigate the conformational changes in the absence and presence of trifluoroethanol (TFE) which indicated increased helical content with increasing concentration of TFE. 8-Anilino-1-naphthalenesulfonic acid (ANS) was used as a probe to compare the unfolding regions of the protein before and after addition of TFE. The results indicated that although the TFE concentration influences VPg folding, it does not play a role in nucleotide binding and that the local solvent hydrophobicity causes significant conformational changes. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-02-01 2018-12-11T16:59:35Z 2018-12-11T16:59:35Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.ijbiomac.2015.11.026 International Journal of Biological Macromolecules, v. 83, p. 178-184. 1879-0003 0141-8130 http://hdl.handle.net/11449/172299 10.1016/j.ijbiomac.2015.11.026 2-s2.0-84949788383 2-s2.0-84949788383.pdf 9162508978945887 0000-0003-2460-1145 |
url |
http://dx.doi.org/10.1016/j.ijbiomac.2015.11.026 http://hdl.handle.net/11449/172299 |
identifier_str_mv |
International Journal of Biological Macromolecules, v. 83, p. 178-184. 1879-0003 0141-8130 10.1016/j.ijbiomac.2015.11.026 2-s2.0-84949788383 2-s2.0-84949788383.pdf 9162508978945887 0000-0003-2460-1145 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
International Journal of Biological Macromolecules 0,917 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
178-184 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128329999450112 |