Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.6620/ZS.2021.60-46 http://hdl.handle.net/11449/222547 |
Resumo: | Drosophila sturtevanti is a widely distributed Neotropical species. In South America, it is abundant and adapted to different phytophysiognomies of the Atlantic Forest biome. Reproductive, chromosomal and enzymatic studies have indicated the existence of a differentiation among D. sturtevanti populations. In this work, the level of genetic diversity and the population genetic structure were analyzed using four population groupings. One hundred and twenty-six D. sturtevanti males collected from nine forest fragments were analyzed for 11 species-specific microsatellite loci. A total of 109 alleles, ranging from 2 to 16 alleles per locus, were detected. The highest mean observed heterozygosity-HO was estimated in samples from the largest collection areas, and the lowest HO was from a population where fire events are common. A low molecular variation, around 3% among populations and negative among groups, an absence of genetic and geographic correlations and a moderate genetic differentiation-FST = 0.0663-indicated that D. sturtevanti is not strongly structured. Besides no overall genetic and geographic distance correlation, the pair of closest geographically populations Matão and Nova Granada showed the lower differentiation through FST, DC and a Neighbor Joining tree. Ribeirão da Ilha-RDI, an isolated insular population, was the most differentiated according to FST, DC and a cluster-based Bayesian analysis. The isolation of RDI that resulted in significant divergence could be ancient, because of sea level regressions/ transgressions, or more recently via founder effect/genetic drift by anthropic action carrying D. sturtevanti hosts from continent to island. This work is important for understanding the genetic variability distribution of a Neotropical forest-dwelling Drosophila species using for the first time, a wide population distribution approach. |
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Repositório Institucional da UNESP |
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Moderate population structure in drosophila sturtevanti from the south american atlantic forest biomeForest fragmentationGenetic diversityPopulation differentiationSaltans groupSimple sequence repeatsDrosophila sturtevanti is a widely distributed Neotropical species. In South America, it is abundant and adapted to different phytophysiognomies of the Atlantic Forest biome. Reproductive, chromosomal and enzymatic studies have indicated the existence of a differentiation among D. sturtevanti populations. In this work, the level of genetic diversity and the population genetic structure were analyzed using four population groupings. One hundred and twenty-six D. sturtevanti males collected from nine forest fragments were analyzed for 11 species-specific microsatellite loci. A total of 109 alleles, ranging from 2 to 16 alleles per locus, were detected. The highest mean observed heterozygosity-HO was estimated in samples from the largest collection areas, and the lowest HO was from a population where fire events are common. A low molecular variation, around 3% among populations and negative among groups, an absence of genetic and geographic correlations and a moderate genetic differentiation-FST = 0.0663-indicated that D. sturtevanti is not strongly structured. Besides no overall genetic and geographic distance correlation, the pair of closest geographically populations Matão and Nova Granada showed the lower differentiation through FST, DC and a Neighbor Joining tree. Ribeirão da Ilha-RDI, an isolated insular population, was the most differentiated according to FST, DC and a cluster-based Bayesian analysis. The isolation of RDI that resulted in significant divergence could be ancient, because of sea level regressions/ transgressions, or more recently via founder effect/genetic drift by anthropic action carrying D. sturtevanti hosts from continent to island. This work is important for understanding the genetic variability distribution of a Neotropical forest-dwelling Drosophila species using for the first time, a wide population distribution approach.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Instituto de Biociências Letras e Ciências Exatas Universidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP), Cristóvão Colombo Street, 2265 – Jardim NazarethUniversidade Estadual do Centro-Oeste (UNICENTRO), Campus CEDETEG, Élio Antonio Dalla Vecchia Alley, 838, Vila CarliInstituto de Biociências Letras e Ciências Exatas Universidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP), Cristóvão Colombo Street, 2265 – Jardim NazarethFAPESP: 2014/14059-0FAPESP: 2015/17579-7FAPESP: 2017/05344-0Universidade Estadual Paulista (UNESP)Universidade Estadual do Centro-Oeste (UNICENTRO)Trava, Bruna Memari [UNESP]Mateus, Rogério PincelaMachado, Luciana Paes de BarrosMadi-Ravazzi, Lilian [UNESP]2022-04-28T19:45:22Z2022-04-28T19:45:22Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.6620/ZS.2021.60-46Zoological Studies, v. 60.1810-522X1021-5506http://hdl.handle.net/11449/22254710.6620/ZS.2021.60-462-s2.0-85116232561Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengZoological Studiesinfo:eu-repo/semantics/openAccess2022-04-28T19:45:22Zoai:repositorio.unesp.br:11449/222547Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:41:55.724942Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
title |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
spellingShingle |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome Trava, Bruna Memari [UNESP] Forest fragmentation Genetic diversity Population differentiation Saltans group Simple sequence repeats |
title_short |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
title_full |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
title_fullStr |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
title_full_unstemmed |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
title_sort |
Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome |
author |
Trava, Bruna Memari [UNESP] |
author_facet |
Trava, Bruna Memari [UNESP] Mateus, Rogério Pincela Machado, Luciana Paes de Barros Madi-Ravazzi, Lilian [UNESP] |
author_role |
author |
author2 |
Mateus, Rogério Pincela Machado, Luciana Paes de Barros Madi-Ravazzi, Lilian [UNESP] |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) Universidade Estadual do Centro-Oeste (UNICENTRO) |
dc.contributor.author.fl_str_mv |
Trava, Bruna Memari [UNESP] Mateus, Rogério Pincela Machado, Luciana Paes de Barros Madi-Ravazzi, Lilian [UNESP] |
dc.subject.por.fl_str_mv |
Forest fragmentation Genetic diversity Population differentiation Saltans group Simple sequence repeats |
topic |
Forest fragmentation Genetic diversity Population differentiation Saltans group Simple sequence repeats |
description |
Drosophila sturtevanti is a widely distributed Neotropical species. In South America, it is abundant and adapted to different phytophysiognomies of the Atlantic Forest biome. Reproductive, chromosomal and enzymatic studies have indicated the existence of a differentiation among D. sturtevanti populations. In this work, the level of genetic diversity and the population genetic structure were analyzed using four population groupings. One hundred and twenty-six D. sturtevanti males collected from nine forest fragments were analyzed for 11 species-specific microsatellite loci. A total of 109 alleles, ranging from 2 to 16 alleles per locus, were detected. The highest mean observed heterozygosity-HO was estimated in samples from the largest collection areas, and the lowest HO was from a population where fire events are common. A low molecular variation, around 3% among populations and negative among groups, an absence of genetic and geographic correlations and a moderate genetic differentiation-FST = 0.0663-indicated that D. sturtevanti is not strongly structured. Besides no overall genetic and geographic distance correlation, the pair of closest geographically populations Matão and Nova Granada showed the lower differentiation through FST, DC and a Neighbor Joining tree. Ribeirão da Ilha-RDI, an isolated insular population, was the most differentiated according to FST, DC and a cluster-based Bayesian analysis. The isolation of RDI that resulted in significant divergence could be ancient, because of sea level regressions/ transgressions, or more recently via founder effect/genetic drift by anthropic action carrying D. sturtevanti hosts from continent to island. This work is important for understanding the genetic variability distribution of a Neotropical forest-dwelling Drosophila species using for the first time, a wide population distribution approach. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-01-01 2022-04-28T19:45:22Z 2022-04-28T19:45:22Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.6620/ZS.2021.60-46 Zoological Studies, v. 60. 1810-522X 1021-5506 http://hdl.handle.net/11449/222547 10.6620/ZS.2021.60-46 2-s2.0-85116232561 |
url |
http://dx.doi.org/10.6620/ZS.2021.60-46 http://hdl.handle.net/11449/222547 |
identifier_str_mv |
Zoological Studies, v. 60. 1810-522X 1021-5506 10.6620/ZS.2021.60-46 2-s2.0-85116232561 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Zoological Studies |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129236262715392 |