Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome

Detalhes bibliográficos
Autor(a) principal: Trava, Bruna Memari [UNESP]
Data de Publicação: 2021
Outros Autores: Mateus, Rogério Pincela, Machado, Luciana Paes de Barros, Madi-Ravazzi, Lilian [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.6620/ZS.2021.60-46
http://hdl.handle.net/11449/222547
Resumo: Drosophila sturtevanti is a widely distributed Neotropical species. In South America, it is abundant and adapted to different phytophysiognomies of the Atlantic Forest biome. Reproductive, chromosomal and enzymatic studies have indicated the existence of a differentiation among D. sturtevanti populations. In this work, the level of genetic diversity and the population genetic structure were analyzed using four population groupings. One hundred and twenty-six D. sturtevanti males collected from nine forest fragments were analyzed for 11 species-specific microsatellite loci. A total of 109 alleles, ranging from 2 to 16 alleles per locus, were detected. The highest mean observed heterozygosity-HO was estimated in samples from the largest collection areas, and the lowest HO was from a population where fire events are common. A low molecular variation, around 3% among populations and negative among groups, an absence of genetic and geographic correlations and a moderate genetic differentiation-FST = 0.0663-indicated that D. sturtevanti is not strongly structured. Besides no overall genetic and geographic distance correlation, the pair of closest geographically populations Matão and Nova Granada showed the lower differentiation through FST, DC and a Neighbor Joining tree. Ribeirão da Ilha-RDI, an isolated insular population, was the most differentiated according to FST, DC and a cluster-based Bayesian analysis. The isolation of RDI that resulted in significant divergence could be ancient, because of sea level regressions/ transgressions, or more recently via founder effect/genetic drift by anthropic action carrying D. sturtevanti hosts from continent to island. This work is important for understanding the genetic variability distribution of a Neotropical forest-dwelling Drosophila species using for the first time, a wide population distribution approach.
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spelling Moderate population structure in drosophila sturtevanti from the south american atlantic forest biomeForest fragmentationGenetic diversityPopulation differentiationSaltans groupSimple sequence repeatsDrosophila sturtevanti is a widely distributed Neotropical species. In South America, it is abundant and adapted to different phytophysiognomies of the Atlantic Forest biome. Reproductive, chromosomal and enzymatic studies have indicated the existence of a differentiation among D. sturtevanti populations. In this work, the level of genetic diversity and the population genetic structure were analyzed using four population groupings. One hundred and twenty-six D. sturtevanti males collected from nine forest fragments were analyzed for 11 species-specific microsatellite loci. A total of 109 alleles, ranging from 2 to 16 alleles per locus, were detected. The highest mean observed heterozygosity-HO was estimated in samples from the largest collection areas, and the lowest HO was from a population where fire events are common. A low molecular variation, around 3% among populations and negative among groups, an absence of genetic and geographic correlations and a moderate genetic differentiation-FST = 0.0663-indicated that D. sturtevanti is not strongly structured. Besides no overall genetic and geographic distance correlation, the pair of closest geographically populations Matão and Nova Granada showed the lower differentiation through FST, DC and a Neighbor Joining tree. Ribeirão da Ilha-RDI, an isolated insular population, was the most differentiated according to FST, DC and a cluster-based Bayesian analysis. The isolation of RDI that resulted in significant divergence could be ancient, because of sea level regressions/ transgressions, or more recently via founder effect/genetic drift by anthropic action carrying D. sturtevanti hosts from continent to island. This work is important for understanding the genetic variability distribution of a Neotropical forest-dwelling Drosophila species using for the first time, a wide population distribution approach.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Instituto de Biociências Letras e Ciências Exatas Universidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP), Cristóvão Colombo Street, 2265 – Jardim NazarethUniversidade Estadual do Centro-Oeste (UNICENTRO), Campus CEDETEG, Élio Antonio Dalla Vecchia Alley, 838, Vila CarliInstituto de Biociências Letras e Ciências Exatas Universidade Estadual Paulista “Júlio de Mesquita Filho” (UNESP), Cristóvão Colombo Street, 2265 – Jardim NazarethFAPESP: 2014/14059-0FAPESP: 2015/17579-7FAPESP: 2017/05344-0Universidade Estadual Paulista (UNESP)Universidade Estadual do Centro-Oeste (UNICENTRO)Trava, Bruna Memari [UNESP]Mateus, Rogério PincelaMachado, Luciana Paes de BarrosMadi-Ravazzi, Lilian [UNESP]2022-04-28T19:45:22Z2022-04-28T19:45:22Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.6620/ZS.2021.60-46Zoological Studies, v. 60.1810-522X1021-5506http://hdl.handle.net/11449/22254710.6620/ZS.2021.60-462-s2.0-85116232561Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengZoological Studiesinfo:eu-repo/semantics/openAccess2022-04-28T19:45:22Zoai:repositorio.unesp.br:11449/222547Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:41:55.724942Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
title Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
spellingShingle Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
Trava, Bruna Memari [UNESP]
Forest fragmentation
Genetic diversity
Population differentiation
Saltans group
Simple sequence repeats
title_short Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
title_full Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
title_fullStr Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
title_full_unstemmed Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
title_sort Moderate population structure in drosophila sturtevanti from the south american atlantic forest biome
author Trava, Bruna Memari [UNESP]
author_facet Trava, Bruna Memari [UNESP]
Mateus, Rogério Pincela
Machado, Luciana Paes de Barros
Madi-Ravazzi, Lilian [UNESP]
author_role author
author2 Mateus, Rogério Pincela
Machado, Luciana Paes de Barros
Madi-Ravazzi, Lilian [UNESP]
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Universidade Estadual do Centro-Oeste (UNICENTRO)
dc.contributor.author.fl_str_mv Trava, Bruna Memari [UNESP]
Mateus, Rogério Pincela
Machado, Luciana Paes de Barros
Madi-Ravazzi, Lilian [UNESP]
dc.subject.por.fl_str_mv Forest fragmentation
Genetic diversity
Population differentiation
Saltans group
Simple sequence repeats
topic Forest fragmentation
Genetic diversity
Population differentiation
Saltans group
Simple sequence repeats
description Drosophila sturtevanti is a widely distributed Neotropical species. In South America, it is abundant and adapted to different phytophysiognomies of the Atlantic Forest biome. Reproductive, chromosomal and enzymatic studies have indicated the existence of a differentiation among D. sturtevanti populations. In this work, the level of genetic diversity and the population genetic structure were analyzed using four population groupings. One hundred and twenty-six D. sturtevanti males collected from nine forest fragments were analyzed for 11 species-specific microsatellite loci. A total of 109 alleles, ranging from 2 to 16 alleles per locus, were detected. The highest mean observed heterozygosity-HO was estimated in samples from the largest collection areas, and the lowest HO was from a population where fire events are common. A low molecular variation, around 3% among populations and negative among groups, an absence of genetic and geographic correlations and a moderate genetic differentiation-FST = 0.0663-indicated that D. sturtevanti is not strongly structured. Besides no overall genetic and geographic distance correlation, the pair of closest geographically populations Matão and Nova Granada showed the lower differentiation through FST, DC and a Neighbor Joining tree. Ribeirão da Ilha-RDI, an isolated insular population, was the most differentiated according to FST, DC and a cluster-based Bayesian analysis. The isolation of RDI that resulted in significant divergence could be ancient, because of sea level regressions/ transgressions, or more recently via founder effect/genetic drift by anthropic action carrying D. sturtevanti hosts from continent to island. This work is important for understanding the genetic variability distribution of a Neotropical forest-dwelling Drosophila species using for the first time, a wide population distribution approach.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
2022-04-28T19:45:22Z
2022-04-28T19:45:22Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.6620/ZS.2021.60-46
Zoological Studies, v. 60.
1810-522X
1021-5506
http://hdl.handle.net/11449/222547
10.6620/ZS.2021.60-46
2-s2.0-85116232561
url http://dx.doi.org/10.6620/ZS.2021.60-46
http://hdl.handle.net/11449/222547
identifier_str_mv Zoological Studies, v. 60.
1810-522X
1021-5506
10.6620/ZS.2021.60-46
2-s2.0-85116232561
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Zoological Studies
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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