The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1515/johh-2017-0049 http://hdl.handle.net/11449/160085 |
Resumo: | HPx is a multicomponent reactive transport model which uses HYDRUS as the flow and transport solver and PHREEQC-3 as the biogeochemical solver. Some recent adaptations have significantly increased the flexibility of the software for different environmental and engineering applications. This paper gives an overview of the most significant changes of HPx, such as coupling transport properties to geochemical state variables, gas diffusion, and transport in two and three dimensions. OpenMP allows for parallel computing using shared memory. Enhancements for scripting may eventually simplify input definitions and create possibilities for defining templates for generic (sub) problems. We included a discussion of root solute uptake and colloid-affected solute transport to show that most or all of the comprehensive features of HYDRUS can be extended with geochemical information. Finally, an example is used to demonstrate how HPx, and similar reactive transport models, can be helpful in implementing different factors relevant for soil organic matter dynamics in soils. HPx offers a unique framework to couple spatial-temporal variations in water contents, temperatures, and water fluxes, with dissolved organic matter and CO2 transport, as well as bioturbation processes. |
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The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applicationsHYDRUSHPxNumerical modelingReactive transportOrganic matterBioturbationHPx is a multicomponent reactive transport model which uses HYDRUS as the flow and transport solver and PHREEQC-3 as the biogeochemical solver. Some recent adaptations have significantly increased the flexibility of the software for different environmental and engineering applications. This paper gives an overview of the most significant changes of HPx, such as coupling transport properties to geochemical state variables, gas diffusion, and transport in two and three dimensions. OpenMP allows for parallel computing using shared memory. Enhancements for scripting may eventually simplify input definitions and create possibilities for defining templates for generic (sub) problems. We included a discussion of root solute uptake and colloid-affected solute transport to show that most or all of the comprehensive features of HYDRUS can be extended with geochemical information. Finally, an example is used to demonstrate how HPx, and similar reactive transport models, can be helpful in implementing different factors relevant for soil organic matter dynamics in soils. HPx offers a unique framework to couple spatial-temporal variations in water contents, temperatures, and water fluxes, with dissolved organic matter and CO2 transport, as well as bioturbation processes.Nucl Res Ctr, Engineered & Geosyst Anal Unit, B-2400 Mol, BelgiumUniv Calif Riverside, Dept Environm Sci, Riverside, CA 92521 USACSIRO, Urrbrae, SA 5064, AustraliaSao Paulo State Univ, CEA, Ctr Environm Studies, BR-13506900 Rio Claro, SP, BrazilUniv Fed Rio de Janeiro, Dept Nucl Engn, BR-21945970 Rio De Janeiro, RJ, BrazilSao Paulo State Univ, CEA, Ctr Environm Studies, BR-13506900 Rio Claro, SP, BrazilVeda, Slovak Acad SciencesNucl Res CtrUniv Calif RiversideCSIROUniversidade Estadual Paulista (Unesp)Universidade Federal do Rio de Janeiro (UFRJ)Jacques, DiederikSimunek, JiriMallants, Dirkvan Genuchten, Martinus Th. [UNESP]2018-11-26T15:47:26Z2018-11-26T15:47:26Z2018-06-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article211-226application/pdfhttp://dx.doi.org/10.1515/johh-2017-0049Journal Of Hydrology And Hydromechanics. Bratislava: Veda, Slovak Acad Sciences, v. 66, n. 2, p. 211-226, 2018.0042-790Xhttp://hdl.handle.net/11449/16008510.1515/johh-2017-0049WOS:000424672300010WOS000424672300010.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of Hydrology And Hydromechanicsinfo:eu-repo/semantics/openAccess2023-10-21T06:10:24Zoai:repositorio.unesp.br:11449/160085Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:33:34.272408Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
title |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
spellingShingle |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications Jacques, Diederik HYDRUS HPx Numerical modeling Reactive transport Organic matter Bioturbation |
title_short |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
title_full |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
title_fullStr |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
title_full_unstemmed |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
title_sort |
The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications |
author |
Jacques, Diederik |
author_facet |
Jacques, Diederik Simunek, Jiri Mallants, Dirk van Genuchten, Martinus Th. [UNESP] |
author_role |
author |
author2 |
Simunek, Jiri Mallants, Dirk van Genuchten, Martinus Th. [UNESP] |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Nucl Res Ctr Univ Calif Riverside CSIRO Universidade Estadual Paulista (Unesp) Universidade Federal do Rio de Janeiro (UFRJ) |
dc.contributor.author.fl_str_mv |
Jacques, Diederik Simunek, Jiri Mallants, Dirk van Genuchten, Martinus Th. [UNESP] |
dc.subject.por.fl_str_mv |
HYDRUS HPx Numerical modeling Reactive transport Organic matter Bioturbation |
topic |
HYDRUS HPx Numerical modeling Reactive transport Organic matter Bioturbation |
description |
HPx is a multicomponent reactive transport model which uses HYDRUS as the flow and transport solver and PHREEQC-3 as the biogeochemical solver. Some recent adaptations have significantly increased the flexibility of the software for different environmental and engineering applications. This paper gives an overview of the most significant changes of HPx, such as coupling transport properties to geochemical state variables, gas diffusion, and transport in two and three dimensions. OpenMP allows for parallel computing using shared memory. Enhancements for scripting may eventually simplify input definitions and create possibilities for defining templates for generic (sub) problems. We included a discussion of root solute uptake and colloid-affected solute transport to show that most or all of the comprehensive features of HYDRUS can be extended with geochemical information. Finally, an example is used to demonstrate how HPx, and similar reactive transport models, can be helpful in implementing different factors relevant for soil organic matter dynamics in soils. HPx offers a unique framework to couple spatial-temporal variations in water contents, temperatures, and water fluxes, with dissolved organic matter and CO2 transport, as well as bioturbation processes. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-11-26T15:47:26Z 2018-11-26T15:47:26Z 2018-06-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1515/johh-2017-0049 Journal Of Hydrology And Hydromechanics. Bratislava: Veda, Slovak Acad Sciences, v. 66, n. 2, p. 211-226, 2018. 0042-790X http://hdl.handle.net/11449/160085 10.1515/johh-2017-0049 WOS:000424672300010 WOS000424672300010.pdf |
url |
http://dx.doi.org/10.1515/johh-2017-0049 http://hdl.handle.net/11449/160085 |
identifier_str_mv |
Journal Of Hydrology And Hydromechanics. Bratislava: Veda, Slovak Acad Sciences, v. 66, n. 2, p. 211-226, 2018. 0042-790X 10.1515/johh-2017-0049 WOS:000424672300010 WOS000424672300010.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal Of Hydrology And Hydromechanics |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
211-226 application/pdf |
dc.publisher.none.fl_str_mv |
Veda, Slovak Acad Sciences |
publisher.none.fl_str_mv |
Veda, Slovak Acad Sciences |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128531009372160 |