Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.3390/cells10123574 http://hdl.handle.net/11449/233905 |
Resumo: | Interspecific hybridization may lead to sterility and/or inviability through differential expression of genes and transposable elements (TEs). In Drosophila, studies have reported massive TE mobilization in hybrids from interspecific crosses of species presenting high divergence times. However, few studies have examined the consequences of TE mobilization upon hybridization in recently diverged species, such as Drosophila arizonae and D. mojavensis. We have sequenced transcriptomes of D. arizonae and the subspecies D. m. wrigleyi and their reciprocal hybrids, as well as piRNAs, to analyze the impact of genomic stress on TE regulation. Our results revealed that the differential expression in both gonadal tissues of parental species was similar. Globally, ovaries and testes showed few deregulated TEs compared with both parental lines. Analyses of small RNA data showed that in ovaries, the TE upregulation is likely due to divergence of copies inherited from parental genomes and lack of piRNAs mapping to them. Nevertheless, in testes, the divergent expression of genes associated with chromatin state and piRNA pathway potentially indicates that TE differential expression is related to the divergence of regulatory genes that play a role in modulating transcriptional and post-transcriptional mechanisms. |
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Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyiExpressionHybridsRepleta groupTransposable elementsInterspecific hybridization may lead to sterility and/or inviability through differential expression of genes and transposable elements (TEs). In Drosophila, studies have reported massive TE mobilization in hybrids from interspecific crosses of species presenting high divergence times. However, few studies have examined the consequences of TE mobilization upon hybridization in recently diverged species, such as Drosophila arizonae and D. mojavensis. We have sequenced transcriptomes of D. arizonae and the subspecies D. m. wrigleyi and their reciprocal hybrids, as well as piRNAs, to analyze the impact of genomic stress on TE regulation. Our results revealed that the differential expression in both gonadal tissues of parental species was similar. Globally, ovaries and testes showed few deregulated TEs compared with both parental lines. Analyses of small RNA data showed that in ovaries, the TE upregulation is likely due to divergence of copies inherited from parental genomes and lack of piRNAs mapping to them. Nevertheless, in testes, the divergent expression of genes associated with chromatin state and piRNA pathway potentially indicates that TE differential expression is related to the divergence of regulatory genes that play a role in modulating transcriptional and post-transcriptional mechanisms.Agence Nationale de la RechercheConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Institute of Biosciences Humanities and Exact Sciences São Paulo State University (Unesp), SPLaboratoire de Biométrie et Biologie Evolutive Université de Lyon Université Lyon 1 CNRS UMR 5558Institut Universitaire de France (IUF)Institute of Biosciences Humanities and Exact Sciences São Paulo State University (Unesp), SPAgence Nationale de la Recherche: 14-CE19-0016CNPq: 141413/2016-6FAPESP: 2016/19271-2CNPq: 303455/2017-9Universidade Estadual Paulista (UNESP)UMR 5558Institut Universitaire de France (IUF)Banho, Cecília Artico [UNESP]Oliveira, Daniel Siqueira [UNESP]Haudry, AnnabelleFablet, MarieVieira, CristinaCarareto, Claudia Marcia Aparecida [UNESP]2022-05-01T11:23:37Z2022-05-01T11:23:37Z2021-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/cells10123574Cells, v. 10, n. 12, 2021.2073-4409http://hdl.handle.net/11449/23390510.3390/cells101235742-s2.0-85121307248Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCellsinfo:eu-repo/semantics/openAccess2022-05-01T11:23:37Zoai:repositorio.unesp.br:11449/233905Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:00:52.194150Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
title |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
spellingShingle |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi Banho, Cecília Artico [UNESP] Expression Hybrids Repleta group Transposable elements |
title_short |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
title_full |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
title_fullStr |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
title_full_unstemmed |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
title_sort |
Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi |
author |
Banho, Cecília Artico [UNESP] |
author_facet |
Banho, Cecília Artico [UNESP] Oliveira, Daniel Siqueira [UNESP] Haudry, Annabelle Fablet, Marie Vieira, Cristina Carareto, Claudia Marcia Aparecida [UNESP] |
author_role |
author |
author2 |
Oliveira, Daniel Siqueira [UNESP] Haudry, Annabelle Fablet, Marie Vieira, Cristina Carareto, Claudia Marcia Aparecida [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) UMR 5558 Institut Universitaire de France (IUF) |
dc.contributor.author.fl_str_mv |
Banho, Cecília Artico [UNESP] Oliveira, Daniel Siqueira [UNESP] Haudry, Annabelle Fablet, Marie Vieira, Cristina Carareto, Claudia Marcia Aparecida [UNESP] |
dc.subject.por.fl_str_mv |
Expression Hybrids Repleta group Transposable elements |
topic |
Expression Hybrids Repleta group Transposable elements |
description |
Interspecific hybridization may lead to sterility and/or inviability through differential expression of genes and transposable elements (TEs). In Drosophila, studies have reported massive TE mobilization in hybrids from interspecific crosses of species presenting high divergence times. However, few studies have examined the consequences of TE mobilization upon hybridization in recently diverged species, such as Drosophila arizonae and D. mojavensis. We have sequenced transcriptomes of D. arizonae and the subspecies D. m. wrigleyi and their reciprocal hybrids, as well as piRNAs, to analyze the impact of genomic stress on TE regulation. Our results revealed that the differential expression in both gonadal tissues of parental species was similar. Globally, ovaries and testes showed few deregulated TEs compared with both parental lines. Analyses of small RNA data showed that in ovaries, the TE upregulation is likely due to divergence of copies inherited from parental genomes and lack of piRNAs mapping to them. Nevertheless, in testes, the divergent expression of genes associated with chromatin state and piRNA pathway potentially indicates that TE differential expression is related to the divergence of regulatory genes that play a role in modulating transcriptional and post-transcriptional mechanisms. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-12-01 2022-05-01T11:23:37Z 2022-05-01T11:23:37Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3390/cells10123574 Cells, v. 10, n. 12, 2021. 2073-4409 http://hdl.handle.net/11449/233905 10.3390/cells10123574 2-s2.0-85121307248 |
url |
http://dx.doi.org/10.3390/cells10123574 http://hdl.handle.net/11449/233905 |
identifier_str_mv |
Cells, v. 10, n. 12, 2021. 2073-4409 10.3390/cells10123574 2-s2.0-85121307248 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Cells |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129383389462528 |