Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi

Detalhes bibliográficos
Autor(a) principal: Banho, Cecília Artico [UNESP]
Data de Publicação: 2021
Outros Autores: Oliveira, Daniel Siqueira [UNESP], Haudry, Annabelle, Fablet, Marie, Vieira, Cristina, Carareto, Claudia Marcia Aparecida [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/cells10123574
http://hdl.handle.net/11449/233905
Resumo: Interspecific hybridization may lead to sterility and/or inviability through differential expression of genes and transposable elements (TEs). In Drosophila, studies have reported massive TE mobilization in hybrids from interspecific crosses of species presenting high divergence times. However, few studies have examined the consequences of TE mobilization upon hybridization in recently diverged species, such as Drosophila arizonae and D. mojavensis. We have sequenced transcriptomes of D. arizonae and the subspecies D. m. wrigleyi and their reciprocal hybrids, as well as piRNAs, to analyze the impact of genomic stress on TE regulation. Our results revealed that the differential expression in both gonadal tissues of parental species was similar. Globally, ovaries and testes showed few deregulated TEs compared with both parental lines. Analyses of small RNA data showed that in ovaries, the TE upregulation is likely due to divergence of copies inherited from parental genomes and lack of piRNAs mapping to them. Nevertheless, in testes, the divergent expression of genes associated with chromatin state and piRNA pathway potentially indicates that TE differential expression is related to the divergence of regulatory genes that play a role in modulating transcriptional and post-transcriptional mechanisms.
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spelling Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyiExpressionHybridsRepleta groupTransposable elementsInterspecific hybridization may lead to sterility and/or inviability through differential expression of genes and transposable elements (TEs). In Drosophila, studies have reported massive TE mobilization in hybrids from interspecific crosses of species presenting high divergence times. However, few studies have examined the consequences of TE mobilization upon hybridization in recently diverged species, such as Drosophila arizonae and D. mojavensis. We have sequenced transcriptomes of D. arizonae and the subspecies D. m. wrigleyi and their reciprocal hybrids, as well as piRNAs, to analyze the impact of genomic stress on TE regulation. Our results revealed that the differential expression in both gonadal tissues of parental species was similar. Globally, ovaries and testes showed few deregulated TEs compared with both parental lines. Analyses of small RNA data showed that in ovaries, the TE upregulation is likely due to divergence of copies inherited from parental genomes and lack of piRNAs mapping to them. Nevertheless, in testes, the divergent expression of genes associated with chromatin state and piRNA pathway potentially indicates that TE differential expression is related to the divergence of regulatory genes that play a role in modulating transcriptional and post-transcriptional mechanisms.Agence Nationale de la RechercheConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Institute of Biosciences Humanities and Exact Sciences São Paulo State University (Unesp), SPLaboratoire de Biométrie et Biologie Evolutive Université de Lyon Université Lyon 1 CNRS UMR 5558Institut Universitaire de France (IUF)Institute of Biosciences Humanities and Exact Sciences São Paulo State University (Unesp), SPAgence Nationale de la Recherche: 14-CE19-0016CNPq: 141413/2016-6FAPESP: 2016/19271-2CNPq: 303455/2017-9Universidade Estadual Paulista (UNESP)UMR 5558Institut Universitaire de France (IUF)Banho, Cecília Artico [UNESP]Oliveira, Daniel Siqueira [UNESP]Haudry, AnnabelleFablet, MarieVieira, CristinaCarareto, Claudia Marcia Aparecida [UNESP]2022-05-01T11:23:37Z2022-05-01T11:23:37Z2021-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/cells10123574Cells, v. 10, n. 12, 2021.2073-4409http://hdl.handle.net/11449/23390510.3390/cells101235742-s2.0-85121307248Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCellsinfo:eu-repo/semantics/openAccess2022-05-01T11:23:37Zoai:repositorio.unesp.br:11449/233905Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:00:52.194150Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
title Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
spellingShingle Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
Banho, Cecília Artico [UNESP]
Expression
Hybrids
Repleta group
Transposable elements
title_short Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
title_full Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
title_fullStr Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
title_full_unstemmed Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
title_sort Transposable element expression and regulation profile in gonads of interspecific hybrids of drosophila arizonae and drosophila mojavensis wrigleyi
author Banho, Cecília Artico [UNESP]
author_facet Banho, Cecília Artico [UNESP]
Oliveira, Daniel Siqueira [UNESP]
Haudry, Annabelle
Fablet, Marie
Vieira, Cristina
Carareto, Claudia Marcia Aparecida [UNESP]
author_role author
author2 Oliveira, Daniel Siqueira [UNESP]
Haudry, Annabelle
Fablet, Marie
Vieira, Cristina
Carareto, Claudia Marcia Aparecida [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
UMR 5558
Institut Universitaire de France (IUF)
dc.contributor.author.fl_str_mv Banho, Cecília Artico [UNESP]
Oliveira, Daniel Siqueira [UNESP]
Haudry, Annabelle
Fablet, Marie
Vieira, Cristina
Carareto, Claudia Marcia Aparecida [UNESP]
dc.subject.por.fl_str_mv Expression
Hybrids
Repleta group
Transposable elements
topic Expression
Hybrids
Repleta group
Transposable elements
description Interspecific hybridization may lead to sterility and/or inviability through differential expression of genes and transposable elements (TEs). In Drosophila, studies have reported massive TE mobilization in hybrids from interspecific crosses of species presenting high divergence times. However, few studies have examined the consequences of TE mobilization upon hybridization in recently diverged species, such as Drosophila arizonae and D. mojavensis. We have sequenced transcriptomes of D. arizonae and the subspecies D. m. wrigleyi and their reciprocal hybrids, as well as piRNAs, to analyze the impact of genomic stress on TE regulation. Our results revealed that the differential expression in both gonadal tissues of parental species was similar. Globally, ovaries and testes showed few deregulated TEs compared with both parental lines. Analyses of small RNA data showed that in ovaries, the TE upregulation is likely due to divergence of copies inherited from parental genomes and lack of piRNAs mapping to them. Nevertheless, in testes, the divergent expression of genes associated with chromatin state and piRNA pathway potentially indicates that TE differential expression is related to the divergence of regulatory genes that play a role in modulating transcriptional and post-transcriptional mechanisms.
publishDate 2021
dc.date.none.fl_str_mv 2021-12-01
2022-05-01T11:23:37Z
2022-05-01T11:23:37Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/cells10123574
Cells, v. 10, n. 12, 2021.
2073-4409
http://hdl.handle.net/11449/233905
10.3390/cells10123574
2-s2.0-85121307248
url http://dx.doi.org/10.3390/cells10123574
http://hdl.handle.net/11449/233905
identifier_str_mv Cells, v. 10, n. 12, 2021.
2073-4409
10.3390/cells10123574
2-s2.0-85121307248
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Cells
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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