Classification of colorectal cancer based on the association of multidimensional and multiresolution features

Detalhes bibliográficos
Autor(a) principal: Ribeiro, Matheus Gonçalves [UNESP]
Data de Publicação: 2019
Outros Autores: Neves, Leandro Alves [UNESP], do Nascimento, Marcelo Zanchetta, Roberto, Guilherme Freire, Martins, Alessandro Santana, Azevedo Tosta, Thaína Aparecida
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.eswa.2018.11.034
http://hdl.handle.net/11449/188431
Resumo: Colorectal cancer is one of the most common types of cancer according to worldwide incidences statistics. The correct diagnosis of this lesion leads to the indication of the most adequate treatments for cancer-affected patients. The diagnosis is made through the visual analysis of tissue samples by pathologists. However, this analysis is susceptible to intra- and inter-pathologists variability in addition to being a complex and time-consuming task. To deal with these challenges, image processing methods are developed for application on histological images obtained through the digitization of the tissue samples. To do so, feature extraction and classification techniques are investigated to aid pathologists and make it possible a faster and more objective diagnosis definition. Therefore, in this work, we propose a method that associates multidimensional fractal techniques, curvelet transforms and Haralick descriptors for the study and pattern recognition of colorectal cancer, which not yet explored in the Literature. The proposed method considered a feature selection approach and different classification techniques for evaluating associations, such as decision tree, random forest, support vector machine, naive Bayes, k* and a polynomial method. This strategy allowed for more precise interpretations regarding the best associations for the separation of groups concerning histological images of colorectal cancer. The proposal was tested on colorectal images from two distinct datasets commonly investigated in the Literature. The best result was reached with features based mainly on lacunarity and percolation obtained from curvelet sub-images, using a polynomial classifier. The tests were evaluated by applying the 10-fold cross-validation method and the result was 0.994 of AUC, which is a relevant contribution to the Literature of pattern recognition of colorectal cancer. The obtained performance with a detailed analysis involving different types of features and classifiers are important contributions for pathologists, specialists interested in the study of this cancer and histological image processing researchers, which aim to develop the clinically applicable computational techniques.
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spelling Classification of colorectal cancer based on the association of multidimensional and multiresolution featuresColorectal cancerCurvelet transformsFeature associationsFractal techniquesHaralick descriptorsMultiresolution featuresColorectal cancer is one of the most common types of cancer according to worldwide incidences statistics. The correct diagnosis of this lesion leads to the indication of the most adequate treatments for cancer-affected patients. The diagnosis is made through the visual analysis of tissue samples by pathologists. However, this analysis is susceptible to intra- and inter-pathologists variability in addition to being a complex and time-consuming task. To deal with these challenges, image processing methods are developed for application on histological images obtained through the digitization of the tissue samples. To do so, feature extraction and classification techniques are investigated to aid pathologists and make it possible a faster and more objective diagnosis definition. Therefore, in this work, we propose a method that associates multidimensional fractal techniques, curvelet transforms and Haralick descriptors for the study and pattern recognition of colorectal cancer, which not yet explored in the Literature. The proposed method considered a feature selection approach and different classification techniques for evaluating associations, such as decision tree, random forest, support vector machine, naive Bayes, k* and a polynomial method. This strategy allowed for more precise interpretations regarding the best associations for the separation of groups concerning histological images of colorectal cancer. The proposal was tested on colorectal images from two distinct datasets commonly investigated in the Literature. The best result was reached with features based mainly on lacunarity and percolation obtained from curvelet sub-images, using a polynomial classifier. The tests were evaluated by applying the 10-fold cross-validation method and the result was 0.994 of AUC, which is a relevant contribution to the Literature of pattern recognition of colorectal cancer. The obtained performance with a detailed analysis involving different types of features and classifiers are important contributions for pathologists, specialists interested in the study of this cancer and histological image processing researchers, which aim to develop the clinically applicable computational techniques.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Department of Computer Science and Statistics (DCCE) São Paulo State University (UNESP), Rua Cristóvão Colombo, 2265, São José do Rio PretoFaculty of Computation (FACOM) - Federal University of Uberlândia (UFU), Avenida João Neves de Ávila 2121, Bl.BFederal Institute of Triangulo Mineiro (IFTM), Rua Belarmino Vilela Junqueira S/NCenter of Mathematics Computing and Cognition Federal University of ABC (UFABC), Avenida dos Estados, 5001, Santo AndréDepartment of Computer Science and Statistics (DCCE) São Paulo State University (UNESP), Rua Cristóvão Colombo, 2265, São José do Rio PretoCAPES: 33004153073P9CNPq: 427114/2016-0FAPEMIG: APQ-00578-18Universidade Estadual Paulista (Unesp)Universidade Federal de Uberlândia (UFU)Federal Institute of Triangulo Mineiro (IFTM)Universidade Federal do ABC (UFABC)Ribeiro, Matheus Gonçalves [UNESP]Neves, Leandro Alves [UNESP]do Nascimento, Marcelo ZanchettaRoberto, Guilherme FreireMartins, Alessandro SantanaAzevedo Tosta, Thaína Aparecida2019-10-06T16:07:51Z2019-10-06T16:07:51Z2019-04-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article262-278http://dx.doi.org/10.1016/j.eswa.2018.11.034Expert Systems with Applications, v. 120, p. 262-278.0957-4174http://hdl.handle.net/11449/18843110.1016/j.eswa.2018.11.0342-s2.0-85057547451Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengExpert Systems with Applicationsinfo:eu-repo/semantics/openAccess2021-10-22T21:16:02Zoai:repositorio.unesp.br:11449/188431Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:36:53.801017Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Classification of colorectal cancer based on the association of multidimensional and multiresolution features
title Classification of colorectal cancer based on the association of multidimensional and multiresolution features
spellingShingle Classification of colorectal cancer based on the association of multidimensional and multiresolution features
Ribeiro, Matheus Gonçalves [UNESP]
Colorectal cancer
Curvelet transforms
Feature associations
Fractal techniques
Haralick descriptors
Multiresolution features
title_short Classification of colorectal cancer based on the association of multidimensional and multiresolution features
title_full Classification of colorectal cancer based on the association of multidimensional and multiresolution features
title_fullStr Classification of colorectal cancer based on the association of multidimensional and multiresolution features
title_full_unstemmed Classification of colorectal cancer based on the association of multidimensional and multiresolution features
title_sort Classification of colorectal cancer based on the association of multidimensional and multiresolution features
author Ribeiro, Matheus Gonçalves [UNESP]
author_facet Ribeiro, Matheus Gonçalves [UNESP]
Neves, Leandro Alves [UNESP]
do Nascimento, Marcelo Zanchetta
Roberto, Guilherme Freire
Martins, Alessandro Santana
Azevedo Tosta, Thaína Aparecida
author_role author
author2 Neves, Leandro Alves [UNESP]
do Nascimento, Marcelo Zanchetta
Roberto, Guilherme Freire
Martins, Alessandro Santana
Azevedo Tosta, Thaína Aparecida
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Federal de Uberlândia (UFU)
Federal Institute of Triangulo Mineiro (IFTM)
Universidade Federal do ABC (UFABC)
dc.contributor.author.fl_str_mv Ribeiro, Matheus Gonçalves [UNESP]
Neves, Leandro Alves [UNESP]
do Nascimento, Marcelo Zanchetta
Roberto, Guilherme Freire
Martins, Alessandro Santana
Azevedo Tosta, Thaína Aparecida
dc.subject.por.fl_str_mv Colorectal cancer
Curvelet transforms
Feature associations
Fractal techniques
Haralick descriptors
Multiresolution features
topic Colorectal cancer
Curvelet transforms
Feature associations
Fractal techniques
Haralick descriptors
Multiresolution features
description Colorectal cancer is one of the most common types of cancer according to worldwide incidences statistics. The correct diagnosis of this lesion leads to the indication of the most adequate treatments for cancer-affected patients. The diagnosis is made through the visual analysis of tissue samples by pathologists. However, this analysis is susceptible to intra- and inter-pathologists variability in addition to being a complex and time-consuming task. To deal with these challenges, image processing methods are developed for application on histological images obtained through the digitization of the tissue samples. To do so, feature extraction and classification techniques are investigated to aid pathologists and make it possible a faster and more objective diagnosis definition. Therefore, in this work, we propose a method that associates multidimensional fractal techniques, curvelet transforms and Haralick descriptors for the study and pattern recognition of colorectal cancer, which not yet explored in the Literature. The proposed method considered a feature selection approach and different classification techniques for evaluating associations, such as decision tree, random forest, support vector machine, naive Bayes, k* and a polynomial method. This strategy allowed for more precise interpretations regarding the best associations for the separation of groups concerning histological images of colorectal cancer. The proposal was tested on colorectal images from two distinct datasets commonly investigated in the Literature. The best result was reached with features based mainly on lacunarity and percolation obtained from curvelet sub-images, using a polynomial classifier. The tests were evaluated by applying the 10-fold cross-validation method and the result was 0.994 of AUC, which is a relevant contribution to the Literature of pattern recognition of colorectal cancer. The obtained performance with a detailed analysis involving different types of features and classifiers are important contributions for pathologists, specialists interested in the study of this cancer and histological image processing researchers, which aim to develop the clinically applicable computational techniques.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T16:07:51Z
2019-10-06T16:07:51Z
2019-04-15
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.eswa.2018.11.034
Expert Systems with Applications, v. 120, p. 262-278.
0957-4174
http://hdl.handle.net/11449/188431
10.1016/j.eswa.2018.11.034
2-s2.0-85057547451
url http://dx.doi.org/10.1016/j.eswa.2018.11.034
http://hdl.handle.net/11449/188431
identifier_str_mv Expert Systems with Applications, v. 120, p. 262-278.
0957-4174
10.1016/j.eswa.2018.11.034
2-s2.0-85057547451
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Expert Systems with Applications
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 262-278
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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