Classification of colorectal cancer based on the association of multidimensional and multiresolution features
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.eswa.2018.11.034 http://hdl.handle.net/11449/188431 |
Resumo: | Colorectal cancer is one of the most common types of cancer according to worldwide incidences statistics. The correct diagnosis of this lesion leads to the indication of the most adequate treatments for cancer-affected patients. The diagnosis is made through the visual analysis of tissue samples by pathologists. However, this analysis is susceptible to intra- and inter-pathologists variability in addition to being a complex and time-consuming task. To deal with these challenges, image processing methods are developed for application on histological images obtained through the digitization of the tissue samples. To do so, feature extraction and classification techniques are investigated to aid pathologists and make it possible a faster and more objective diagnosis definition. Therefore, in this work, we propose a method that associates multidimensional fractal techniques, curvelet transforms and Haralick descriptors for the study and pattern recognition of colorectal cancer, which not yet explored in the Literature. The proposed method considered a feature selection approach and different classification techniques for evaluating associations, such as decision tree, random forest, support vector machine, naive Bayes, k* and a polynomial method. This strategy allowed for more precise interpretations regarding the best associations for the separation of groups concerning histological images of colorectal cancer. The proposal was tested on colorectal images from two distinct datasets commonly investigated in the Literature. The best result was reached with features based mainly on lacunarity and percolation obtained from curvelet sub-images, using a polynomial classifier. The tests were evaluated by applying the 10-fold cross-validation method and the result was 0.994 of AUC, which is a relevant contribution to the Literature of pattern recognition of colorectal cancer. The obtained performance with a detailed analysis involving different types of features and classifiers are important contributions for pathologists, specialists interested in the study of this cancer and histological image processing researchers, which aim to develop the clinically applicable computational techniques. |
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Classification of colorectal cancer based on the association of multidimensional and multiresolution featuresColorectal cancerCurvelet transformsFeature associationsFractal techniquesHaralick descriptorsMultiresolution featuresColorectal cancer is one of the most common types of cancer according to worldwide incidences statistics. The correct diagnosis of this lesion leads to the indication of the most adequate treatments for cancer-affected patients. The diagnosis is made through the visual analysis of tissue samples by pathologists. However, this analysis is susceptible to intra- and inter-pathologists variability in addition to being a complex and time-consuming task. To deal with these challenges, image processing methods are developed for application on histological images obtained through the digitization of the tissue samples. To do so, feature extraction and classification techniques are investigated to aid pathologists and make it possible a faster and more objective diagnosis definition. Therefore, in this work, we propose a method that associates multidimensional fractal techniques, curvelet transforms and Haralick descriptors for the study and pattern recognition of colorectal cancer, which not yet explored in the Literature. The proposed method considered a feature selection approach and different classification techniques for evaluating associations, such as decision tree, random forest, support vector machine, naive Bayes, k* and a polynomial method. This strategy allowed for more precise interpretations regarding the best associations for the separation of groups concerning histological images of colorectal cancer. The proposal was tested on colorectal images from two distinct datasets commonly investigated in the Literature. The best result was reached with features based mainly on lacunarity and percolation obtained from curvelet sub-images, using a polynomial classifier. The tests were evaluated by applying the 10-fold cross-validation method and the result was 0.994 of AUC, which is a relevant contribution to the Literature of pattern recognition of colorectal cancer. The obtained performance with a detailed analysis involving different types of features and classifiers are important contributions for pathologists, specialists interested in the study of this cancer and histological image processing researchers, which aim to develop the clinically applicable computational techniques.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Department of Computer Science and Statistics (DCCE) São Paulo State University (UNESP), Rua Cristóvão Colombo, 2265, São José do Rio PretoFaculty of Computation (FACOM) - Federal University of Uberlândia (UFU), Avenida João Neves de Ávila 2121, Bl.BFederal Institute of Triangulo Mineiro (IFTM), Rua Belarmino Vilela Junqueira S/NCenter of Mathematics Computing and Cognition Federal University of ABC (UFABC), Avenida dos Estados, 5001, Santo AndréDepartment of Computer Science and Statistics (DCCE) São Paulo State University (UNESP), Rua Cristóvão Colombo, 2265, São José do Rio PretoCAPES: 33004153073P9CNPq: 427114/2016-0FAPEMIG: APQ-00578-18Universidade Estadual Paulista (Unesp)Universidade Federal de Uberlândia (UFU)Federal Institute of Triangulo Mineiro (IFTM)Universidade Federal do ABC (UFABC)Ribeiro, Matheus Gonçalves [UNESP]Neves, Leandro Alves [UNESP]do Nascimento, Marcelo ZanchettaRoberto, Guilherme FreireMartins, Alessandro SantanaAzevedo Tosta, Thaína Aparecida2019-10-06T16:07:51Z2019-10-06T16:07:51Z2019-04-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article262-278http://dx.doi.org/10.1016/j.eswa.2018.11.034Expert Systems with Applications, v. 120, p. 262-278.0957-4174http://hdl.handle.net/11449/18843110.1016/j.eswa.2018.11.0342-s2.0-85057547451Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengExpert Systems with Applicationsinfo:eu-repo/semantics/openAccess2021-10-22T21:16:02Zoai:repositorio.unesp.br:11449/188431Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:36:53.801017Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
title |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
spellingShingle |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features Ribeiro, Matheus Gonçalves [UNESP] Colorectal cancer Curvelet transforms Feature associations Fractal techniques Haralick descriptors Multiresolution features |
title_short |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
title_full |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
title_fullStr |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
title_full_unstemmed |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
title_sort |
Classification of colorectal cancer based on the association of multidimensional and multiresolution features |
author |
Ribeiro, Matheus Gonçalves [UNESP] |
author_facet |
Ribeiro, Matheus Gonçalves [UNESP] Neves, Leandro Alves [UNESP] do Nascimento, Marcelo Zanchetta Roberto, Guilherme Freire Martins, Alessandro Santana Azevedo Tosta, Thaína Aparecida |
author_role |
author |
author2 |
Neves, Leandro Alves [UNESP] do Nascimento, Marcelo Zanchetta Roberto, Guilherme Freire Martins, Alessandro Santana Azevedo Tosta, Thaína Aparecida |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Federal de Uberlândia (UFU) Federal Institute of Triangulo Mineiro (IFTM) Universidade Federal do ABC (UFABC) |
dc.contributor.author.fl_str_mv |
Ribeiro, Matheus Gonçalves [UNESP] Neves, Leandro Alves [UNESP] do Nascimento, Marcelo Zanchetta Roberto, Guilherme Freire Martins, Alessandro Santana Azevedo Tosta, Thaína Aparecida |
dc.subject.por.fl_str_mv |
Colorectal cancer Curvelet transforms Feature associations Fractal techniques Haralick descriptors Multiresolution features |
topic |
Colorectal cancer Curvelet transforms Feature associations Fractal techniques Haralick descriptors Multiresolution features |
description |
Colorectal cancer is one of the most common types of cancer according to worldwide incidences statistics. The correct diagnosis of this lesion leads to the indication of the most adequate treatments for cancer-affected patients. The diagnosis is made through the visual analysis of tissue samples by pathologists. However, this analysis is susceptible to intra- and inter-pathologists variability in addition to being a complex and time-consuming task. To deal with these challenges, image processing methods are developed for application on histological images obtained through the digitization of the tissue samples. To do so, feature extraction and classification techniques are investigated to aid pathologists and make it possible a faster and more objective diagnosis definition. Therefore, in this work, we propose a method that associates multidimensional fractal techniques, curvelet transforms and Haralick descriptors for the study and pattern recognition of colorectal cancer, which not yet explored in the Literature. The proposed method considered a feature selection approach and different classification techniques for evaluating associations, such as decision tree, random forest, support vector machine, naive Bayes, k* and a polynomial method. This strategy allowed for more precise interpretations regarding the best associations for the separation of groups concerning histological images of colorectal cancer. The proposal was tested on colorectal images from two distinct datasets commonly investigated in the Literature. The best result was reached with features based mainly on lacunarity and percolation obtained from curvelet sub-images, using a polynomial classifier. The tests were evaluated by applying the 10-fold cross-validation method and the result was 0.994 of AUC, which is a relevant contribution to the Literature of pattern recognition of colorectal cancer. The obtained performance with a detailed analysis involving different types of features and classifiers are important contributions for pathologists, specialists interested in the study of this cancer and histological image processing researchers, which aim to develop the clinically applicable computational techniques. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T16:07:51Z 2019-10-06T16:07:51Z 2019-04-15 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.eswa.2018.11.034 Expert Systems with Applications, v. 120, p. 262-278. 0957-4174 http://hdl.handle.net/11449/188431 10.1016/j.eswa.2018.11.034 2-s2.0-85057547451 |
url |
http://dx.doi.org/10.1016/j.eswa.2018.11.034 http://hdl.handle.net/11449/188431 |
identifier_str_mv |
Expert Systems with Applications, v. 120, p. 262-278. 0957-4174 10.1016/j.eswa.2018.11.034 2-s2.0-85057547451 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Expert Systems with Applications |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
262-278 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129227525980160 |