EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae

Detalhes bibliográficos
Autor(a) principal: Jacobus, Ana P. [UNESP]
Data de Publicação: 2022
Outros Autores: Barreto, Joneclei A. [UNESP], De Bem, Lucas S. [UNESP], Menegon, Yasmine A. [UNESP], Fier, Ícaro, Bueno, João G. R., Dos Santos, Leandro V., Gross, Jeferson [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1021/acssynbio.2c00348
http://hdl.handle.net/11449/246154
Resumo: Most CRISPR/Cas9 applications in yeast rely on a plasmid-based expression of Cas9 and its guide RNA (gRNA) containing a 20-nucleotides (nts) spacer tailored to each genomic target. The lengthy assembly of this customized gRNA requires at least 3-5 days for its precloning in Escherichia coli, purification, validation, and cotransformation with Cas9 into a yeast strain. Here, we constructed a series of 12 EasyGuide plasmids to simplify CRISPR/Cas9 applications in Saccharomyces cerevisiae. The new vectors provide templates for generating PCR fragments that can assemble up to six functional gRNAs directly into yeasts via homologous recombination between the 20-nts spacers. By dispensing precloning in E. coli, yeast in vivo gRNA assembly significantly reduces the CRISPR/Cas9 experimental workload. A highly efficient yeast genome editing procedure, involving PCR amplification of gRNAs and donors, followed by their transformation into a Cas9-expressing strain, can be easily accomplished through a quick protocol.
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spelling EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiaeCRISPR/Cas9EasyGuide plasmidsgenome editinggRNA cloningin vivo cloningSaccharomyces cerevisiaeMost CRISPR/Cas9 applications in yeast rely on a plasmid-based expression of Cas9 and its guide RNA (gRNA) containing a 20-nucleotides (nts) spacer tailored to each genomic target. The lengthy assembly of this customized gRNA requires at least 3-5 days for its precloning in Escherichia coli, purification, validation, and cotransformation with Cas9 into a yeast strain. Here, we constructed a series of 12 EasyGuide plasmids to simplify CRISPR/Cas9 applications in Saccharomyces cerevisiae. The new vectors provide templates for generating PCR fragments that can assemble up to six functional gRNAs directly into yeasts via homologous recombination between the 20-nts spacers. By dispensing precloning in E. coli, yeast in vivo gRNA assembly significantly reduces the CRISPR/Cas9 experimental workload. A highly efficient yeast genome editing procedure, involving PCR amplification of gRNAs and donors, followed by their transformation into a Cas9-expressing strain, can be easily accomplished through a quick protocol.Institute for Bioenergy Research Sao Paulo State University, São PauloPh.D. Program in Bioenergy Sao Paulo State University, São PauloGenetics and Molecular Biology Graduate Program Institute of Biology University of CampinasSENAI Innovation Institute for BiotechnologyInstitute for Bioenergy Research Sao Paulo State University, São PauloPh.D. Program in Bioenergy Sao Paulo State University, São PauloUniversidade Estadual Paulista (UNESP)Universidade Estadual de Campinas (UNICAMP)Innovation Institute for BiotechnologyJacobus, Ana P. [UNESP]Barreto, Joneclei A. [UNESP]De Bem, Lucas S. [UNESP]Menegon, Yasmine A. [UNESP]Fier, ÍcaroBueno, João G. R.Dos Santos, Leandro V.Gross, Jeferson [UNESP]2023-07-29T12:33:13Z2023-07-29T12:33:13Z2022-11-18info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article3886-3891http://dx.doi.org/10.1021/acssynbio.2c00348ACS Synthetic Biology, v. 11, n. 11, p. 3886-3891, 2022.2161-5063http://hdl.handle.net/11449/24615410.1021/acssynbio.2c003482-s2.0-85140578486Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengACS Synthetic Biologyinfo:eu-repo/semantics/openAccess2023-07-29T12:33:13Zoai:repositorio.unesp.br:11449/246154Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-07-29T12:33:13Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
title EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
spellingShingle EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
Jacobus, Ana P. [UNESP]
CRISPR/Cas9
EasyGuide plasmids
genome editing
gRNA cloning
in vivo cloning
Saccharomyces cerevisiae
title_short EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
title_full EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
title_fullStr EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
title_full_unstemmed EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
title_sort EasyGuide Plasmids Support in Vivo Assembly of gRNAs for CRISPR/Cas9 Applications in Saccharomyces cerevisiae
author Jacobus, Ana P. [UNESP]
author_facet Jacobus, Ana P. [UNESP]
Barreto, Joneclei A. [UNESP]
De Bem, Lucas S. [UNESP]
Menegon, Yasmine A. [UNESP]
Fier, Ícaro
Bueno, João G. R.
Dos Santos, Leandro V.
Gross, Jeferson [UNESP]
author_role author
author2 Barreto, Joneclei A. [UNESP]
De Bem, Lucas S. [UNESP]
Menegon, Yasmine A. [UNESP]
Fier, Ícaro
Bueno, João G. R.
Dos Santos, Leandro V.
Gross, Jeferson [UNESP]
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Universidade Estadual de Campinas (UNICAMP)
Innovation Institute for Biotechnology
dc.contributor.author.fl_str_mv Jacobus, Ana P. [UNESP]
Barreto, Joneclei A. [UNESP]
De Bem, Lucas S. [UNESP]
Menegon, Yasmine A. [UNESP]
Fier, Ícaro
Bueno, João G. R.
Dos Santos, Leandro V.
Gross, Jeferson [UNESP]
dc.subject.por.fl_str_mv CRISPR/Cas9
EasyGuide plasmids
genome editing
gRNA cloning
in vivo cloning
Saccharomyces cerevisiae
topic CRISPR/Cas9
EasyGuide plasmids
genome editing
gRNA cloning
in vivo cloning
Saccharomyces cerevisiae
description Most CRISPR/Cas9 applications in yeast rely on a plasmid-based expression of Cas9 and its guide RNA (gRNA) containing a 20-nucleotides (nts) spacer tailored to each genomic target. The lengthy assembly of this customized gRNA requires at least 3-5 days for its precloning in Escherichia coli, purification, validation, and cotransformation with Cas9 into a yeast strain. Here, we constructed a series of 12 EasyGuide plasmids to simplify CRISPR/Cas9 applications in Saccharomyces cerevisiae. The new vectors provide templates for generating PCR fragments that can assemble up to six functional gRNAs directly into yeasts via homologous recombination between the 20-nts spacers. By dispensing precloning in E. coli, yeast in vivo gRNA assembly significantly reduces the CRISPR/Cas9 experimental workload. A highly efficient yeast genome editing procedure, involving PCR amplification of gRNAs and donors, followed by their transformation into a Cas9-expressing strain, can be easily accomplished through a quick protocol.
publishDate 2022
dc.date.none.fl_str_mv 2022-11-18
2023-07-29T12:33:13Z
2023-07-29T12:33:13Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1021/acssynbio.2c00348
ACS Synthetic Biology, v. 11, n. 11, p. 3886-3891, 2022.
2161-5063
http://hdl.handle.net/11449/246154
10.1021/acssynbio.2c00348
2-s2.0-85140578486
url http://dx.doi.org/10.1021/acssynbio.2c00348
http://hdl.handle.net/11449/246154
identifier_str_mv ACS Synthetic Biology, v. 11, n. 11, p. 3886-3891, 2022.
2161-5063
10.1021/acssynbio.2c00348
2-s2.0-85140578486
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv ACS Synthetic Biology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 3886-3891
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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