The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases

Detalhes bibliográficos
Autor(a) principal: Viviani, Vadim R. [UNESP]
Data de Publicação: 2008
Outros Autores: Silva Neto, Antonio J. [UNESP], Arnoldi, Frederico G. C. [UNESP], Barbosa, João A. R. G., Ohmiya, Yoshihiro
Tipo de documento: Artigo de conferência
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1111/j.1751-1097.2007.00209.x
http://hdl.handle.net/11449/70243
Resumo: Beetle luciferases emit a wide range of bioluminescence colors, ranging from green to red. Firefly luciferases can shift the spectrum to red in response to pH and temperature changes, whereas click beetle and railroadworm luciferases do not. Despite many studies on firefly luciferases, the origin of pH-sensitivity is far from being understood. Through comparative site-directed mutagenesis and modeling studies, using the pH-sensitive luciferases (Macrolampis and Cratomorphus distinctus fireflies) and the pH-insensitive luciferases (Pyrearinus termitilluminans, Phrixotrix viviani and Phrixotrix hirtus) cloned by our group, here we show that substitutions dramatically affecting bioluminescence colors in both groups of luciferases are clustered in the loop between residues 223-235 (Photinus pyralis sequence). The substitutions at positions 227, 228 and 229 (P. pyralis sequence) cause dramatic redshift and temporal shift in both groups of luciferases, indicating their involvement in labile interactions. Modeling studies showed that the residues Y227 and N229 are buried in the protein core, fixing the loop to other structural elements participating at the bottom of the luciferin binding site. Changes in pH and temperature (in firefly luciferases), as well as point mutations in this loop, may disrupt the interactions of these structural elements exposing the active site and modulating bioluminescence colors. © 2007 The Authors.
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spelling The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferasesluciferasesolventamino acid sequenceanimalbeetlebinding sitechemical structurechemistryconference paperenzymologygeneticsmetabolismmolecular geneticsnucleotide sequencepHprotein tertiary structuresensitivity and specificitysequence alignmentspectrofluorometryAmino Acid SequenceAnimalsBeetlesBinding SitesConserved SequenceHydrogen-Ion ConcentrationLuciferasesModels, MolecularMolecular Sequence DataProtein Structure, TertiarySensitivity and SpecificitySequence AlignmentSolventsSpectrometry, FluorescenceColeopteraCratomorphus distinctusElateridaeLampyridaePhotinus pyralisPyrearinus termitilluminansBeetle luciferases emit a wide range of bioluminescence colors, ranging from green to red. Firefly luciferases can shift the spectrum to red in response to pH and temperature changes, whereas click beetle and railroadworm luciferases do not. Despite many studies on firefly luciferases, the origin of pH-sensitivity is far from being understood. Through comparative site-directed mutagenesis and modeling studies, using the pH-sensitive luciferases (Macrolampis and Cratomorphus distinctus fireflies) and the pH-insensitive luciferases (Pyrearinus termitilluminans, Phrixotrix viviani and Phrixotrix hirtus) cloned by our group, here we show that substitutions dramatically affecting bioluminescence colors in both groups of luciferases are clustered in the loop between residues 223-235 (Photinus pyralis sequence). The substitutions at positions 227, 228 and 229 (P. pyralis sequence) cause dramatic redshift and temporal shift in both groups of luciferases, indicating their involvement in labile interactions. Modeling studies showed that the residues Y227 and N229 are buried in the protein core, fixing the loop to other structural elements participating at the bottom of the luciferin binding site. Changes in pH and temperature (in firefly luciferases), as well as point mutations in this loop, may disrupt the interactions of these structural elements exposing the active site and modulating bioluminescence colors. © 2007 The Authors.Laboratório de Biotecnologia e Bioluminescência Universidade de Sorocaba (UNISO) Campus de Sorocaba, Sorocaba, São PauloDepartamento de Biologia Celular e Molecular Instituto de Biociências Universidade Estadual de São Paulo (UNESP), Rio Claro, São PauloCentro de Biologia Molecular Estrutural Laboratório Nacional de Luz Síncrotron, Campinas, São PauloCell Dynamics Research Group National Institute of Advanced Science and Technology (AIST), OsakaDepartamento de Biologia Celular e Molecular Instituto de Biociências Universidade Estadual de São Paulo (UNESP), Rio Claro, São PauloUniversidade de Sorocaba (UNISO)Universidade Estadual Paulista (Unesp)Laboratório Nacional de Luz SíncrotronNational Institute of Advanced Science and Technology (AIST)Viviani, Vadim R. [UNESP]Silva Neto, Antonio J. [UNESP]Arnoldi, Frederico G. C. [UNESP]Barbosa, João A. R. G.Ohmiya, Yoshihiro2014-05-27T11:22:46Z2014-05-27T11:22:46Z2008-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObject138-144http://dx.doi.org/10.1111/j.1751-1097.2007.00209.xPhotochemistry and Photobiology, v. 84, n. 1, p. 138-144, 2008.0031-8655http://hdl.handle.net/11449/7024310.1111/j.1751-1097.2007.00209.x2-s2.0-37249039528Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPhotochemistry and Photobiology2.2140,591info:eu-repo/semantics/openAccess2021-10-23T21:41:41Zoai:repositorio.unesp.br:11449/70243Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:31:40.929525Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
title The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
spellingShingle The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
Viviani, Vadim R. [UNESP]
luciferase
solvent
amino acid sequence
animal
beetle
binding site
chemical structure
chemistry
conference paper
enzymology
genetics
metabolism
molecular genetics
nucleotide sequence
pH
protein tertiary structure
sensitivity and specificity
sequence alignment
spectrofluorometry
Amino Acid Sequence
Animals
Beetles
Binding Sites
Conserved Sequence
Hydrogen-Ion Concentration
Luciferases
Models, Molecular
Molecular Sequence Data
Protein Structure, Tertiary
Sensitivity and Specificity
Sequence Alignment
Solvents
Spectrometry, Fluorescence
Coleoptera
Cratomorphus distinctus
Elateridae
Lampyridae
Photinus pyralis
Pyrearinus termitilluminans
title_short The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
title_full The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
title_fullStr The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
title_full_unstemmed The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
title_sort The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
author Viviani, Vadim R. [UNESP]
author_facet Viviani, Vadim R. [UNESP]
Silva Neto, Antonio J. [UNESP]
Arnoldi, Frederico G. C. [UNESP]
Barbosa, João A. R. G.
Ohmiya, Yoshihiro
author_role author
author2 Silva Neto, Antonio J. [UNESP]
Arnoldi, Frederico G. C. [UNESP]
Barbosa, João A. R. G.
Ohmiya, Yoshihiro
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade de Sorocaba (UNISO)
Universidade Estadual Paulista (Unesp)
Laboratório Nacional de Luz Síncrotron
National Institute of Advanced Science and Technology (AIST)
dc.contributor.author.fl_str_mv Viviani, Vadim R. [UNESP]
Silva Neto, Antonio J. [UNESP]
Arnoldi, Frederico G. C. [UNESP]
Barbosa, João A. R. G.
Ohmiya, Yoshihiro
dc.subject.por.fl_str_mv luciferase
solvent
amino acid sequence
animal
beetle
binding site
chemical structure
chemistry
conference paper
enzymology
genetics
metabolism
molecular genetics
nucleotide sequence
pH
protein tertiary structure
sensitivity and specificity
sequence alignment
spectrofluorometry
Amino Acid Sequence
Animals
Beetles
Binding Sites
Conserved Sequence
Hydrogen-Ion Concentration
Luciferases
Models, Molecular
Molecular Sequence Data
Protein Structure, Tertiary
Sensitivity and Specificity
Sequence Alignment
Solvents
Spectrometry, Fluorescence
Coleoptera
Cratomorphus distinctus
Elateridae
Lampyridae
Photinus pyralis
Pyrearinus termitilluminans
topic luciferase
solvent
amino acid sequence
animal
beetle
binding site
chemical structure
chemistry
conference paper
enzymology
genetics
metabolism
molecular genetics
nucleotide sequence
pH
protein tertiary structure
sensitivity and specificity
sequence alignment
spectrofluorometry
Amino Acid Sequence
Animals
Beetles
Binding Sites
Conserved Sequence
Hydrogen-Ion Concentration
Luciferases
Models, Molecular
Molecular Sequence Data
Protein Structure, Tertiary
Sensitivity and Specificity
Sequence Alignment
Solvents
Spectrometry, Fluorescence
Coleoptera
Cratomorphus distinctus
Elateridae
Lampyridae
Photinus pyralis
Pyrearinus termitilluminans
description Beetle luciferases emit a wide range of bioluminescence colors, ranging from green to red. Firefly luciferases can shift the spectrum to red in response to pH and temperature changes, whereas click beetle and railroadworm luciferases do not. Despite many studies on firefly luciferases, the origin of pH-sensitivity is far from being understood. Through comparative site-directed mutagenesis and modeling studies, using the pH-sensitive luciferases (Macrolampis and Cratomorphus distinctus fireflies) and the pH-insensitive luciferases (Pyrearinus termitilluminans, Phrixotrix viviani and Phrixotrix hirtus) cloned by our group, here we show that substitutions dramatically affecting bioluminescence colors in both groups of luciferases are clustered in the loop between residues 223-235 (Photinus pyralis sequence). The substitutions at positions 227, 228 and 229 (P. pyralis sequence) cause dramatic redshift and temporal shift in both groups of luciferases, indicating their involvement in labile interactions. Modeling studies showed that the residues Y227 and N229 are buried in the protein core, fixing the loop to other structural elements participating at the bottom of the luciferin binding site. Changes in pH and temperature (in firefly luciferases), as well as point mutations in this loop, may disrupt the interactions of these structural elements exposing the active site and modulating bioluminescence colors. © 2007 The Authors.
publishDate 2008
dc.date.none.fl_str_mv 2008-01-01
2014-05-27T11:22:46Z
2014-05-27T11:22:46Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/conferenceObject
format conferenceObject
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1111/j.1751-1097.2007.00209.x
Photochemistry and Photobiology, v. 84, n. 1, p. 138-144, 2008.
0031-8655
http://hdl.handle.net/11449/70243
10.1111/j.1751-1097.2007.00209.x
2-s2.0-37249039528
url http://dx.doi.org/10.1111/j.1751-1097.2007.00209.x
http://hdl.handle.net/11449/70243
identifier_str_mv Photochemistry and Photobiology, v. 84, n. 1, p. 138-144, 2008.
0031-8655
10.1111/j.1751-1097.2007.00209.x
2-s2.0-37249039528
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Photochemistry and Photobiology
2.214
0,591
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 138-144
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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