The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , , |
Tipo de documento: | Artigo de conferência |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1111/j.1751-1097.2007.00209.x http://hdl.handle.net/11449/70243 |
Resumo: | Beetle luciferases emit a wide range of bioluminescence colors, ranging from green to red. Firefly luciferases can shift the spectrum to red in response to pH and temperature changes, whereas click beetle and railroadworm luciferases do not. Despite many studies on firefly luciferases, the origin of pH-sensitivity is far from being understood. Through comparative site-directed mutagenesis and modeling studies, using the pH-sensitive luciferases (Macrolampis and Cratomorphus distinctus fireflies) and the pH-insensitive luciferases (Pyrearinus termitilluminans, Phrixotrix viviani and Phrixotrix hirtus) cloned by our group, here we show that substitutions dramatically affecting bioluminescence colors in both groups of luciferases are clustered in the loop between residues 223-235 (Photinus pyralis sequence). The substitutions at positions 227, 228 and 229 (P. pyralis sequence) cause dramatic redshift and temporal shift in both groups of luciferases, indicating their involvement in labile interactions. Modeling studies showed that the residues Y227 and N229 are buried in the protein core, fixing the loop to other structural elements participating at the bottom of the luciferin binding site. Changes in pH and temperature (in firefly luciferases), as well as point mutations in this loop, may disrupt the interactions of these structural elements exposing the active site and modulating bioluminescence colors. © 2007 The Authors. |
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The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferasesluciferasesolventamino acid sequenceanimalbeetlebinding sitechemical structurechemistryconference paperenzymologygeneticsmetabolismmolecular geneticsnucleotide sequencepHprotein tertiary structuresensitivity and specificitysequence alignmentspectrofluorometryAmino Acid SequenceAnimalsBeetlesBinding SitesConserved SequenceHydrogen-Ion ConcentrationLuciferasesModels, MolecularMolecular Sequence DataProtein Structure, TertiarySensitivity and SpecificitySequence AlignmentSolventsSpectrometry, FluorescenceColeopteraCratomorphus distinctusElateridaeLampyridaePhotinus pyralisPyrearinus termitilluminansBeetle luciferases emit a wide range of bioluminescence colors, ranging from green to red. Firefly luciferases can shift the spectrum to red in response to pH and temperature changes, whereas click beetle and railroadworm luciferases do not. Despite many studies on firefly luciferases, the origin of pH-sensitivity is far from being understood. Through comparative site-directed mutagenesis and modeling studies, using the pH-sensitive luciferases (Macrolampis and Cratomorphus distinctus fireflies) and the pH-insensitive luciferases (Pyrearinus termitilluminans, Phrixotrix viviani and Phrixotrix hirtus) cloned by our group, here we show that substitutions dramatically affecting bioluminescence colors in both groups of luciferases are clustered in the loop between residues 223-235 (Photinus pyralis sequence). The substitutions at positions 227, 228 and 229 (P. pyralis sequence) cause dramatic redshift and temporal shift in both groups of luciferases, indicating their involvement in labile interactions. Modeling studies showed that the residues Y227 and N229 are buried in the protein core, fixing the loop to other structural elements participating at the bottom of the luciferin binding site. Changes in pH and temperature (in firefly luciferases), as well as point mutations in this loop, may disrupt the interactions of these structural elements exposing the active site and modulating bioluminescence colors. © 2007 The Authors.Laboratório de Biotecnologia e Bioluminescência Universidade de Sorocaba (UNISO) Campus de Sorocaba, Sorocaba, São PauloDepartamento de Biologia Celular e Molecular Instituto de Biociências Universidade Estadual de São Paulo (UNESP), Rio Claro, São PauloCentro de Biologia Molecular Estrutural Laboratório Nacional de Luz Síncrotron, Campinas, São PauloCell Dynamics Research Group National Institute of Advanced Science and Technology (AIST), OsakaDepartamento de Biologia Celular e Molecular Instituto de Biociências Universidade Estadual de São Paulo (UNESP), Rio Claro, São PauloUniversidade de Sorocaba (UNISO)Universidade Estadual Paulista (Unesp)Laboratório Nacional de Luz SíncrotronNational Institute of Advanced Science and Technology (AIST)Viviani, Vadim R. [UNESP]Silva Neto, Antonio J. [UNESP]Arnoldi, Frederico G. C. [UNESP]Barbosa, João A. R. G.Ohmiya, Yoshihiro2014-05-27T11:22:46Z2014-05-27T11:22:46Z2008-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObject138-144http://dx.doi.org/10.1111/j.1751-1097.2007.00209.xPhotochemistry and Photobiology, v. 84, n. 1, p. 138-144, 2008.0031-8655http://hdl.handle.net/11449/7024310.1111/j.1751-1097.2007.00209.x2-s2.0-37249039528Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPhotochemistry and Photobiology2.2140,591info:eu-repo/semantics/openAccess2021-10-23T21:41:41Zoai:repositorio.unesp.br:11449/70243Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:31:40.929525Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
title |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
spellingShingle |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases Viviani, Vadim R. [UNESP] luciferase solvent amino acid sequence animal beetle binding site chemical structure chemistry conference paper enzymology genetics metabolism molecular genetics nucleotide sequence pH protein tertiary structure sensitivity and specificity sequence alignment spectrofluorometry Amino Acid Sequence Animals Beetles Binding Sites Conserved Sequence Hydrogen-Ion Concentration Luciferases Models, Molecular Molecular Sequence Data Protein Structure, Tertiary Sensitivity and Specificity Sequence Alignment Solvents Spectrometry, Fluorescence Coleoptera Cratomorphus distinctus Elateridae Lampyridae Photinus pyralis Pyrearinus termitilluminans |
title_short |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
title_full |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
title_fullStr |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
title_full_unstemmed |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
title_sort |
The influence of the loop between residues 223-235 in beetle luciferase bioluminescence spectra: A solvent gate for the active site of pH-sensitive luciferases |
author |
Viviani, Vadim R. [UNESP] |
author_facet |
Viviani, Vadim R. [UNESP] Silva Neto, Antonio J. [UNESP] Arnoldi, Frederico G. C. [UNESP] Barbosa, João A. R. G. Ohmiya, Yoshihiro |
author_role |
author |
author2 |
Silva Neto, Antonio J. [UNESP] Arnoldi, Frederico G. C. [UNESP] Barbosa, João A. R. G. Ohmiya, Yoshihiro |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade de Sorocaba (UNISO) Universidade Estadual Paulista (Unesp) Laboratório Nacional de Luz Síncrotron National Institute of Advanced Science and Technology (AIST) |
dc.contributor.author.fl_str_mv |
Viviani, Vadim R. [UNESP] Silva Neto, Antonio J. [UNESP] Arnoldi, Frederico G. C. [UNESP] Barbosa, João A. R. G. Ohmiya, Yoshihiro |
dc.subject.por.fl_str_mv |
luciferase solvent amino acid sequence animal beetle binding site chemical structure chemistry conference paper enzymology genetics metabolism molecular genetics nucleotide sequence pH protein tertiary structure sensitivity and specificity sequence alignment spectrofluorometry Amino Acid Sequence Animals Beetles Binding Sites Conserved Sequence Hydrogen-Ion Concentration Luciferases Models, Molecular Molecular Sequence Data Protein Structure, Tertiary Sensitivity and Specificity Sequence Alignment Solvents Spectrometry, Fluorescence Coleoptera Cratomorphus distinctus Elateridae Lampyridae Photinus pyralis Pyrearinus termitilluminans |
topic |
luciferase solvent amino acid sequence animal beetle binding site chemical structure chemistry conference paper enzymology genetics metabolism molecular genetics nucleotide sequence pH protein tertiary structure sensitivity and specificity sequence alignment spectrofluorometry Amino Acid Sequence Animals Beetles Binding Sites Conserved Sequence Hydrogen-Ion Concentration Luciferases Models, Molecular Molecular Sequence Data Protein Structure, Tertiary Sensitivity and Specificity Sequence Alignment Solvents Spectrometry, Fluorescence Coleoptera Cratomorphus distinctus Elateridae Lampyridae Photinus pyralis Pyrearinus termitilluminans |
description |
Beetle luciferases emit a wide range of bioluminescence colors, ranging from green to red. Firefly luciferases can shift the spectrum to red in response to pH and temperature changes, whereas click beetle and railroadworm luciferases do not. Despite many studies on firefly luciferases, the origin of pH-sensitivity is far from being understood. Through comparative site-directed mutagenesis and modeling studies, using the pH-sensitive luciferases (Macrolampis and Cratomorphus distinctus fireflies) and the pH-insensitive luciferases (Pyrearinus termitilluminans, Phrixotrix viviani and Phrixotrix hirtus) cloned by our group, here we show that substitutions dramatically affecting bioluminescence colors in both groups of luciferases are clustered in the loop between residues 223-235 (Photinus pyralis sequence). The substitutions at positions 227, 228 and 229 (P. pyralis sequence) cause dramatic redshift and temporal shift in both groups of luciferases, indicating their involvement in labile interactions. Modeling studies showed that the residues Y227 and N229 are buried in the protein core, fixing the loop to other structural elements participating at the bottom of the luciferin binding site. Changes in pH and temperature (in firefly luciferases), as well as point mutations in this loop, may disrupt the interactions of these structural elements exposing the active site and modulating bioluminescence colors. © 2007 The Authors. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-01-01 2014-05-27T11:22:46Z 2014-05-27T11:22:46Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/conferenceObject |
format |
conferenceObject |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1111/j.1751-1097.2007.00209.x Photochemistry and Photobiology, v. 84, n. 1, p. 138-144, 2008. 0031-8655 http://hdl.handle.net/11449/70243 10.1111/j.1751-1097.2007.00209.x 2-s2.0-37249039528 |
url |
http://dx.doi.org/10.1111/j.1751-1097.2007.00209.x http://hdl.handle.net/11449/70243 |
identifier_str_mv |
Photochemistry and Photobiology, v. 84, n. 1, p. 138-144, 2008. 0031-8655 10.1111/j.1751-1097.2007.00209.x 2-s2.0-37249039528 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Photochemistry and Photobiology 2.214 0,591 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
138-144 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128373949464576 |