APEHR: Automated prognosis in electronic health records using multi-head self-attention

Detalhes bibliográficos
Autor(a) principal: Florez, Alexander Y.C.
Data de Publicação: 2021
Outros Autores: Scabora, Lucas, Eler, Danilo M [UNESP], Rodrigues, Jose F
Tipo de documento: Artigo de conferência
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1109/CBMS52027.2021.00077
http://hdl.handle.net/11449/222009
Resumo: Automated prognosis has been a topic of intense research. Many works have sought to learn from Electronic Health Records using Recurrent Neural Networks that, despite promising results, have been overcome by novel techniques. We introduce APEHR, a Transformer approach that leverages medical prognosis using the latest technology Neural Network Transformer, which has demonstrated superior results in problems whose data is organized in sequential fashion. We contribute with an innovative problem modeling along with a detailed discussion of how Transformers can be used in the medical domain. Our results demonstrate a prognostic performance that surpasses previous works by at least 6% for metric Recall@k in the public dataset MIMIC-III.
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spelling APEHR: Automated prognosis in electronic health records using multi-head self-attentionautomated clinical predictionclinical trajectorydeep learningtransformerAutomated prognosis has been a topic of intense research. Many works have sought to learn from Electronic Health Records using Recurrent Neural Networks that, despite promising results, have been overcome by novel techniques. We introduce APEHR, a Transformer approach that leverages medical prognosis using the latest technology Neural Network Transformer, which has demonstrated superior results in problems whose data is organized in sequential fashion. We contribute with an innovative problem modeling along with a detailed discussion of how Transformers can be used in the medical domain. Our results demonstrate a prognostic performance that surpasses previous works by at least 6% for metric Recall@k in the public dataset MIMIC-III.University of Sao Paulo, SPSao Paulo State University, SPSao Paulo State University, SPUniversidade de São Paulo (USP)Universidade Estadual Paulista (UNESP)Florez, Alexander Y.C.Scabora, LucasEler, Danilo M [UNESP]Rodrigues, Jose F2022-04-28T19:41:55Z2022-04-28T19:41:55Z2021-06-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObject277-282http://dx.doi.org/10.1109/CBMS52027.2021.00077Proceedings - IEEE Symposium on Computer-Based Medical Systems, v. 2021-June, p. 277-282.1063-7125http://hdl.handle.net/11449/22200910.1109/CBMS52027.2021.000772-s2.0-85110861789Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengProceedings - IEEE Symposium on Computer-Based Medical Systemsinfo:eu-repo/semantics/openAccess2022-04-28T19:41:55Zoai:repositorio.unesp.br:11449/222009Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T17:08:57.482603Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv APEHR: Automated prognosis in electronic health records using multi-head self-attention
title APEHR: Automated prognosis in electronic health records using multi-head self-attention
spellingShingle APEHR: Automated prognosis in electronic health records using multi-head self-attention
Florez, Alexander Y.C.
automated clinical prediction
clinical trajectory
deep learning
transformer
title_short APEHR: Automated prognosis in electronic health records using multi-head self-attention
title_full APEHR: Automated prognosis in electronic health records using multi-head self-attention
title_fullStr APEHR: Automated prognosis in electronic health records using multi-head self-attention
title_full_unstemmed APEHR: Automated prognosis in electronic health records using multi-head self-attention
title_sort APEHR: Automated prognosis in electronic health records using multi-head self-attention
author Florez, Alexander Y.C.
author_facet Florez, Alexander Y.C.
Scabora, Lucas
Eler, Danilo M [UNESP]
Rodrigues, Jose F
author_role author
author2 Scabora, Lucas
Eler, Danilo M [UNESP]
Rodrigues, Jose F
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv Florez, Alexander Y.C.
Scabora, Lucas
Eler, Danilo M [UNESP]
Rodrigues, Jose F
dc.subject.por.fl_str_mv automated clinical prediction
clinical trajectory
deep learning
transformer
topic automated clinical prediction
clinical trajectory
deep learning
transformer
description Automated prognosis has been a topic of intense research. Many works have sought to learn from Electronic Health Records using Recurrent Neural Networks that, despite promising results, have been overcome by novel techniques. We introduce APEHR, a Transformer approach that leverages medical prognosis using the latest technology Neural Network Transformer, which has demonstrated superior results in problems whose data is organized in sequential fashion. We contribute with an innovative problem modeling along with a detailed discussion of how Transformers can be used in the medical domain. Our results demonstrate a prognostic performance that surpasses previous works by at least 6% for metric Recall@k in the public dataset MIMIC-III.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-01
2022-04-28T19:41:55Z
2022-04-28T19:41:55Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/conferenceObject
format conferenceObject
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1109/CBMS52027.2021.00077
Proceedings - IEEE Symposium on Computer-Based Medical Systems, v. 2021-June, p. 277-282.
1063-7125
http://hdl.handle.net/11449/222009
10.1109/CBMS52027.2021.00077
2-s2.0-85110861789
url http://dx.doi.org/10.1109/CBMS52027.2021.00077
http://hdl.handle.net/11449/222009
identifier_str_mv Proceedings - IEEE Symposium on Computer-Based Medical Systems, v. 2021-June, p. 277-282.
1063-7125
10.1109/CBMS52027.2021.00077
2-s2.0-85110861789
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Proceedings - IEEE Symposium on Computer-Based Medical Systems
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 277-282
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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