Unsupervised method for normalization of hematoxylin-eosin stain in histological images

Detalhes bibliográficos
Autor(a) principal: Azevedo Tosta, Thaina A.
Data de Publicação: 2019
Outros Autores: Faria, Paulo Rogerio de, Silva Servato, Joao Paulo, Neves, Leandro Alves [UNESP], Roberto, Guilherme Freire, Martins, Alessandro Santana, Nascimento, Marcelo Zanchetta do
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.compmedimag.2019.101646
http://hdl.handle.net/11449/196279
Resumo: Histological images stained with hematoxylin-eosin are widely used by pathologists for cancer diagnosis. However, these images can have color variations that highly influence the histological image processing techniques. To deal with this potential limitation, normalization methods are useful for color correction. In this paper, a histological image color normalization is presented by considering the biological and hematoxylin-eosin properties. To this end, the stain representation of a reference image was applied in place of the original images representation, allowing the preservation of histological structures. This proposal was evaluated on histological images with great variations of contrast, and both visual and quantitative analyzes yielded promising results. (C) 2019 Elsevier Ltd. All rights reserved.
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spelling Unsupervised method for normalization of hematoxylin-eosin stain in histological imagesHistopathological image analysisNormalizationSpectral matchingSparse non-negative matrix factorizationHistological images stained with hematoxylin-eosin are widely used by pathologists for cancer diagnosis. However, these images can have color variations that highly influence the histological image processing techniques. To deal with this potential limitation, normalization methods are useful for color correction. In this paper, a histological image color normalization is presented by considering the biological and hematoxylin-eosin properties. To this end, the stain representation of a reference image was applied in place of the original images representation, allowing the preservation of histological structures. This proposal was evaluated on histological images with great variations of contrast, and both visual and quantitative analyzes yielded promising results. (C) 2019 Elsevier Ltd. All rights reserved.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)Fed Univ ABC, Ctr Math Comp & Cognit, Av Estados 5001, BR-09210580 Santo Andre, SP, BrazilUniv Fed Uberlandia, Inst Biomed Sci, Dept Histol & Morphol, Av Amazonas S-N, BR-38405320 Uberlandia, MG, BrazilUniv Uberaba, Sch Dent, Av Nene Sabino 1801, BR-38055500 Uberaba, MG, BrazilSao Paulo State Univ, Dept Comp Sci & Stat, R Cristovao Colombo 2265, BR-15054000 Sao Jose Do Rio Preto, SP, BrazilUniv Fed Uberlandia, Fac Comp Sci, Av Joao Naves de Avila 2121, BR-38400902 Uberlandia, MG, BrazilFed Inst Triangulo Mineiro, R Belarmino Vilela Junqueira S-N, BR-38305200 Ituiutaba, MG, BrazilSao Paulo State Univ, Dept Comp Sci & Stat, R Cristovao Colombo 2265, BR-15054000 Sao Jose Do Rio Preto, SP, BrazilCAPES: 001CNPq: 427114/2016-0CNPq: 304848/2018-2CNPq: 430965/2018-4CNPq: 313365/2018-0FAPEMIG: APQ-00578-18CAPES: 1575210Elsevier B.V.Fed Univ ABCUniversidade Federal de Uberlândia (UFU)Univ UberabaUniversidade Estadual Paulista (Unesp)Fed Inst Triangulo MineiroAzevedo Tosta, Thaina A.Faria, Paulo Rogerio deSilva Servato, Joao PauloNeves, Leandro Alves [UNESP]Roberto, Guilherme FreireMartins, Alessandro SantanaNascimento, Marcelo Zanchetta do2020-12-10T19:39:31Z2020-12-10T19:39:31Z2019-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article7http://dx.doi.org/10.1016/j.compmedimag.2019.101646Computerized Medical Imaging And Graphics. Oxford: Pergamon-elsevier Science Ltd, v. 77, 7 p., 2019.0895-6111http://hdl.handle.net/11449/19627910.1016/j.compmedimag.2019.101646WOS:000493216400004Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengComputerized Medical Imaging And Graphicsinfo:eu-repo/semantics/openAccess2021-10-23T06:44:56Zoai:repositorio.unesp.br:11449/196279Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:04:41.571691Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Unsupervised method for normalization of hematoxylin-eosin stain in histological images
title Unsupervised method for normalization of hematoxylin-eosin stain in histological images
spellingShingle Unsupervised method for normalization of hematoxylin-eosin stain in histological images
Azevedo Tosta, Thaina A.
Histopathological image analysis
Normalization
Spectral matching
Sparse non-negative matrix factorization
title_short Unsupervised method for normalization of hematoxylin-eosin stain in histological images
title_full Unsupervised method for normalization of hematoxylin-eosin stain in histological images
title_fullStr Unsupervised method for normalization of hematoxylin-eosin stain in histological images
title_full_unstemmed Unsupervised method for normalization of hematoxylin-eosin stain in histological images
title_sort Unsupervised method for normalization of hematoxylin-eosin stain in histological images
author Azevedo Tosta, Thaina A.
author_facet Azevedo Tosta, Thaina A.
Faria, Paulo Rogerio de
Silva Servato, Joao Paulo
Neves, Leandro Alves [UNESP]
Roberto, Guilherme Freire
Martins, Alessandro Santana
Nascimento, Marcelo Zanchetta do
author_role author
author2 Faria, Paulo Rogerio de
Silva Servato, Joao Paulo
Neves, Leandro Alves [UNESP]
Roberto, Guilherme Freire
Martins, Alessandro Santana
Nascimento, Marcelo Zanchetta do
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Fed Univ ABC
Universidade Federal de Uberlândia (UFU)
Univ Uberaba
Universidade Estadual Paulista (Unesp)
Fed Inst Triangulo Mineiro
dc.contributor.author.fl_str_mv Azevedo Tosta, Thaina A.
Faria, Paulo Rogerio de
Silva Servato, Joao Paulo
Neves, Leandro Alves [UNESP]
Roberto, Guilherme Freire
Martins, Alessandro Santana
Nascimento, Marcelo Zanchetta do
dc.subject.por.fl_str_mv Histopathological image analysis
Normalization
Spectral matching
Sparse non-negative matrix factorization
topic Histopathological image analysis
Normalization
Spectral matching
Sparse non-negative matrix factorization
description Histological images stained with hematoxylin-eosin are widely used by pathologists for cancer diagnosis. However, these images can have color variations that highly influence the histological image processing techniques. To deal with this potential limitation, normalization methods are useful for color correction. In this paper, a histological image color normalization is presented by considering the biological and hematoxylin-eosin properties. To this end, the stain representation of a reference image was applied in place of the original images representation, allowing the preservation of histological structures. This proposal was evaluated on histological images with great variations of contrast, and both visual and quantitative analyzes yielded promising results. (C) 2019 Elsevier Ltd. All rights reserved.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-01
2020-12-10T19:39:31Z
2020-12-10T19:39:31Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.compmedimag.2019.101646
Computerized Medical Imaging And Graphics. Oxford: Pergamon-elsevier Science Ltd, v. 77, 7 p., 2019.
0895-6111
http://hdl.handle.net/11449/196279
10.1016/j.compmedimag.2019.101646
WOS:000493216400004
url http://dx.doi.org/10.1016/j.compmedimag.2019.101646
http://hdl.handle.net/11449/196279
identifier_str_mv Computerized Medical Imaging And Graphics. Oxford: Pergamon-elsevier Science Ltd, v. 77, 7 p., 2019.
0895-6111
10.1016/j.compmedimag.2019.101646
WOS:000493216400004
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Computerized Medical Imaging And Graphics
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 7
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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