Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning

Detalhes bibliográficos
Autor(a) principal: Ramírez-Zamudio, Germán Darío
Data de Publicação: 2023
Outros Autores: Ganga, Maria Júlia Generoso [UNESP], Pereira, Guilherme Luis [UNESP], Nociti, Ricardo Perecin, Chiaratti, Marcos Roberto, Cooke, Reinaldo Fernandes, Chardulo, Luis Artur Loyola [UNESP], Baldassini, Welder Angelo [UNESP], Machado-Neto, Otávio Rodrigues [UNESP], Curi, Rogério Abdallah [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
DOI: 10.3390/metabo13020160
Texto Completo: http://dx.doi.org/10.3390/metabo13020160
http://hdl.handle.net/11449/249695
Resumo: The aim of this study was to identify differentially expressed genes, biological processes, and metabolic pathways related to adipogenesis and lipogenesis in calves receiving different diets during the cow-calf phase. Forty-eight uncastrated F1 Angus × Nellore males were randomly assigned to two treatments from thirty days of age to weaning: no creep feeding (G1) or creep feeding (G2). The creep feed offered contained ground corn (44.8%), soybean meal (40.4%), and mineral core (14.8%), with 22% crude protein and 65% total digestible nutrients in dry matter. After weaning, the animals were feedlot finished for 180 days and fed a single diet containing 12.6% forage and 87.4% corn-based concentrate. Longissimus thoracis muscle samples were collected by biopsy at weaning for transcriptome analysis and at slaughter for the measurement of intramuscular fat content (IMF) and marbling score (MS). Animals of G2 had 17.2% and 14.0% higher IMF and MS, respectively (p < 0.05). We identified 947 differentially expressed genes (log2 fold change 0.5, FDR 5%); of these, 504 were upregulated and 443 were downregulated in G2. Part of the genes upregulated in G2 were related to PPAR signaling (PPARA, SLC27A1, FABP3, and DBI), unsaturated fatty acid synthesis (FADS1, FADS2, SCD, and SCD5), and fatty acid metabolism (FASN, FADS1, FADS2, SCD, and SCD5). Regarding biological processes, the genes upregulated in G2 were related to cholesterol biosynthesis (EBP, CYP51A1, DHCR24, and LSS), unsaturated fatty acid biosynthesis (FADS2, SCD, SCD5, and FADS1), and insulin sensitivity (INSIG1 and LPIN2). Cow-calf supplementation G2 positively affected energy metabolism and lipid biosynthesis, and thus favored the deposition of marbling fat during the postweaning period, which was shown here in an unprecedented way, by analyzing the transcriptome, genes, pathways, and enriched processes due to the use of creep feeding.
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spelling Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at WeaningBos indicuscarcassmarblingmeat qualitynutrigenomicsThe aim of this study was to identify differentially expressed genes, biological processes, and metabolic pathways related to adipogenesis and lipogenesis in calves receiving different diets during the cow-calf phase. Forty-eight uncastrated F1 Angus × Nellore males were randomly assigned to two treatments from thirty days of age to weaning: no creep feeding (G1) or creep feeding (G2). The creep feed offered contained ground corn (44.8%), soybean meal (40.4%), and mineral core (14.8%), with 22% crude protein and 65% total digestible nutrients in dry matter. After weaning, the animals were feedlot finished for 180 days and fed a single diet containing 12.6% forage and 87.4% corn-based concentrate. Longissimus thoracis muscle samples were collected by biopsy at weaning for transcriptome analysis and at slaughter for the measurement of intramuscular fat content (IMF) and marbling score (MS). Animals of G2 had 17.2% and 14.0% higher IMF and MS, respectively (p < 0.05). We identified 947 differentially expressed genes (log2 fold change 0.5, FDR 5%); of these, 504 were upregulated and 443 were downregulated in G2. Part of the genes upregulated in G2 were related to PPAR signaling (PPARA, SLC27A1, FABP3, and DBI), unsaturated fatty acid synthesis (FADS1, FADS2, SCD, and SCD5), and fatty acid metabolism (FASN, FADS1, FADS2, SCD, and SCD5). Regarding biological processes, the genes upregulated in G2 were related to cholesterol biosynthesis (EBP, CYP51A1, DHCR24, and LSS), unsaturated fatty acid biosynthesis (FADS2, SCD, SCD5, and FADS1), and insulin sensitivity (INSIG1 and LPIN2). Cow-calf supplementation G2 positively affected energy metabolism and lipid biosynthesis, and thus favored the deposition of marbling fat during the postweaning period, which was shown here in an unprecedented way, by analyzing the transcriptome, genes, pathways, and enriched processes due to the use of creep feeding.College of Animal Science and Food Engineering São Paulo University (USP), SPSchool of Agriculture and Veterinary Sciences (FCAV) São Paulo State University (UNESP), SPSchool of Veterinary Medicine and Animal Science (FMVZ) São Paulo State University (UNESP), SPDepartment of Genetics and Evolution Federal University of São Carlos (UFSCAR), SPDepartment of Animal Science Texas A&M UniversitySchool of Agriculture and Veterinary Sciences (FCAV) São Paulo State University (UNESP), SPSchool of Veterinary Medicine and Animal Science (FMVZ) São Paulo State University (UNESP), SPUniversidade de São Paulo (USP)Universidade Estadual Paulista (UNESP)Universidade Federal de São Carlos (UFSCar)Texas A&M UniversityRamírez-Zamudio, Germán DaríoGanga, Maria Júlia Generoso [UNESP]Pereira, Guilherme Luis [UNESP]Nociti, Ricardo PerecinChiaratti, Marcos RobertoCooke, Reinaldo FernandesChardulo, Luis Artur Loyola [UNESP]Baldassini, Welder Angelo [UNESP]Machado-Neto, Otávio Rodrigues [UNESP]Curi, Rogério Abdallah [UNESP]2023-07-29T16:06:45Z2023-07-29T16:06:45Z2023-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/metabo13020160Metabolites, v. 13, n. 2, 2023.2218-1989http://hdl.handle.net/11449/24969510.3390/metabo130201602-s2.0-85148893000Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMetabolitesinfo:eu-repo/semantics/openAccess2024-09-06T18:55:52Zoai:repositorio.unesp.br:11449/249695Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-06T18:55:52Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
title Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
spellingShingle Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
Ramírez-Zamudio, Germán Darío
Bos indicus
carcass
marbling
meat quality
nutrigenomics
Ramírez-Zamudio, Germán Darío
Bos indicus
carcass
marbling
meat quality
nutrigenomics
title_short Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
title_full Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
title_fullStr Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
title_full_unstemmed Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
title_sort Effect of Cow-Calf Supplementation on Gene Expression, Processes, and Pathways Related to Adipogenesis and Lipogenesis in Longissimus thoracis Muscle of F1 Angus × Nellore Cattle at Weaning
author Ramírez-Zamudio, Germán Darío
author_facet Ramírez-Zamudio, Germán Darío
Ramírez-Zamudio, Germán Darío
Ganga, Maria Júlia Generoso [UNESP]
Pereira, Guilherme Luis [UNESP]
Nociti, Ricardo Perecin
Chiaratti, Marcos Roberto
Cooke, Reinaldo Fernandes
Chardulo, Luis Artur Loyola [UNESP]
Baldassini, Welder Angelo [UNESP]
Machado-Neto, Otávio Rodrigues [UNESP]
Curi, Rogério Abdallah [UNESP]
Ganga, Maria Júlia Generoso [UNESP]
Pereira, Guilherme Luis [UNESP]
Nociti, Ricardo Perecin
Chiaratti, Marcos Roberto
Cooke, Reinaldo Fernandes
Chardulo, Luis Artur Loyola [UNESP]
Baldassini, Welder Angelo [UNESP]
Machado-Neto, Otávio Rodrigues [UNESP]
Curi, Rogério Abdallah [UNESP]
author_role author
author2 Ganga, Maria Júlia Generoso [UNESP]
Pereira, Guilherme Luis [UNESP]
Nociti, Ricardo Perecin
Chiaratti, Marcos Roberto
Cooke, Reinaldo Fernandes
Chardulo, Luis Artur Loyola [UNESP]
Baldassini, Welder Angelo [UNESP]
Machado-Neto, Otávio Rodrigues [UNESP]
Curi, Rogério Abdallah [UNESP]
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Estadual Paulista (UNESP)
Universidade Federal de São Carlos (UFSCar)
Texas A&M University
dc.contributor.author.fl_str_mv Ramírez-Zamudio, Germán Darío
Ganga, Maria Júlia Generoso [UNESP]
Pereira, Guilherme Luis [UNESP]
Nociti, Ricardo Perecin
Chiaratti, Marcos Roberto
Cooke, Reinaldo Fernandes
Chardulo, Luis Artur Loyola [UNESP]
Baldassini, Welder Angelo [UNESP]
Machado-Neto, Otávio Rodrigues [UNESP]
Curi, Rogério Abdallah [UNESP]
dc.subject.por.fl_str_mv Bos indicus
carcass
marbling
meat quality
nutrigenomics
topic Bos indicus
carcass
marbling
meat quality
nutrigenomics
description The aim of this study was to identify differentially expressed genes, biological processes, and metabolic pathways related to adipogenesis and lipogenesis in calves receiving different diets during the cow-calf phase. Forty-eight uncastrated F1 Angus × Nellore males were randomly assigned to two treatments from thirty days of age to weaning: no creep feeding (G1) or creep feeding (G2). The creep feed offered contained ground corn (44.8%), soybean meal (40.4%), and mineral core (14.8%), with 22% crude protein and 65% total digestible nutrients in dry matter. After weaning, the animals were feedlot finished for 180 days and fed a single diet containing 12.6% forage and 87.4% corn-based concentrate. Longissimus thoracis muscle samples were collected by biopsy at weaning for transcriptome analysis and at slaughter for the measurement of intramuscular fat content (IMF) and marbling score (MS). Animals of G2 had 17.2% and 14.0% higher IMF and MS, respectively (p < 0.05). We identified 947 differentially expressed genes (log2 fold change 0.5, FDR 5%); of these, 504 were upregulated and 443 were downregulated in G2. Part of the genes upregulated in G2 were related to PPAR signaling (PPARA, SLC27A1, FABP3, and DBI), unsaturated fatty acid synthesis (FADS1, FADS2, SCD, and SCD5), and fatty acid metabolism (FASN, FADS1, FADS2, SCD, and SCD5). Regarding biological processes, the genes upregulated in G2 were related to cholesterol biosynthesis (EBP, CYP51A1, DHCR24, and LSS), unsaturated fatty acid biosynthesis (FADS2, SCD, SCD5, and FADS1), and insulin sensitivity (INSIG1 and LPIN2). Cow-calf supplementation G2 positively affected energy metabolism and lipid biosynthesis, and thus favored the deposition of marbling fat during the postweaning period, which was shown here in an unprecedented way, by analyzing the transcriptome, genes, pathways, and enriched processes due to the use of creep feeding.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T16:06:45Z
2023-07-29T16:06:45Z
2023-02-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/metabo13020160
Metabolites, v. 13, n. 2, 2023.
2218-1989
http://hdl.handle.net/11449/249695
10.3390/metabo13020160
2-s2.0-85148893000
url http://dx.doi.org/10.3390/metabo13020160
http://hdl.handle.net/11449/249695
identifier_str_mv Metabolites, v. 13, n. 2, 2023.
2218-1989
10.3390/metabo13020160
2-s2.0-85148893000
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Metabolites
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
_version_ 1822183848809594880
dc.identifier.doi.none.fl_str_mv 10.3390/metabo13020160