Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling

Detalhes bibliográficos
Autor(a) principal: Oliveira, Claudio [UNESP]
Data de Publicação: 2011
Outros Autores: Avelino, Gleisy S. [UNESP], Abe, Kelly T. [UNESP], Mariguela, Tatiane C. [UNESP], Benine, Ricardo C. [UNESP], Orti, Guillermo, Vari, Richard P., Correa e Castro, Ricardo M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1186/1471-2148-11-275
http://hdl.handle.net/11449/18735
Resumo: Background: With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical freshwater ecosystems. The composition, phylogeny, and classification of Characidae is currently uncertain, despite significant efforts based on analysis of morphological and molecular data. No consensus about the monophyly of this group or its position within the order Characiformes has been reached, challenged by the fact that many key studies to date have non-overlapping taxonomic representation and focus only on subsets of this diversity.Results: In the present study we propose a new definition of the family Characidae and a hypothesis of relationships for the Characiformes based on phylogenetic analysis of DNA sequences of two mitochondrial and three nuclear genes (4,680 base pairs). The sequences were obtained from 211 samples representing 166 genera distributed among all 18 recognized families in the order Characiformes, all 14 recognized subfamilies in the Characidae, plus 56 of the genera so far considered incertae sedis in the Characidae. The phylogeny obtained is robust, with most lineages significantly supported by posterior probabilities in Bayesian analysis, and high bootstrap values from maximum likelihood and parsimony analyses.Conclusion: A monophyletic assemblage strongly supported in all our phylogenetic analysis is herein defined as the Characidae and includes the characiform species lacking a supraorbital bone and with a derived position of the emergence of the hyoid artery from the anterior ceratohyal. To recognize this and several other monophyletic groups within characiforms we propose changes in the limits of several families to facilitate future studies in the Characiformes and particularly the Characidae. This work presents a new phylogenetic framework for a speciose and morphologically diverse group of freshwater fishes of significant ecological and evolutionary importance across the Neotropics and portions of Africa.
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spelling Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup samplingBackground: With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical freshwater ecosystems. The composition, phylogeny, and classification of Characidae is currently uncertain, despite significant efforts based on analysis of morphological and molecular data. No consensus about the monophyly of this group or its position within the order Characiformes has been reached, challenged by the fact that many key studies to date have non-overlapping taxonomic representation and focus only on subsets of this diversity.Results: In the present study we propose a new definition of the family Characidae and a hypothesis of relationships for the Characiformes based on phylogenetic analysis of DNA sequences of two mitochondrial and three nuclear genes (4,680 base pairs). The sequences were obtained from 211 samples representing 166 genera distributed among all 18 recognized families in the order Characiformes, all 14 recognized subfamilies in the Characidae, plus 56 of the genera so far considered incertae sedis in the Characidae. The phylogeny obtained is robust, with most lineages significantly supported by posterior probabilities in Bayesian analysis, and high bootstrap values from maximum likelihood and parsimony analyses.Conclusion: A monophyletic assemblage strongly supported in all our phylogenetic analysis is herein defined as the Characidae and includes the characiform species lacking a supraorbital bone and with a derived position of the emergence of the hyoid artery from the anterior ceratohyal. To recognize this and several other monophyletic groups within characiforms we propose changes in the limits of several families to facilitate future studies in the Characiformes and particularly the Characidae. This work presents a new phylogenetic framework for a speciose and morphologically diverse group of freshwater fishes of significant ecological and evolutionary importance across the Neotropics and portions of Africa.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)U.S. National Science FoundationUniv Estadual Paulista, Inst Biociencias, Dept Morfol, São Paulo, BrazilGeorge Washington Univ, Dept Biol Sci, Washington, DC 20052 USANatl Museum Nat Hist, Smithsonian Inst, Dept Vertebrate Zool, Washington, DC USAUniv São Paulo, FFCLRP, Dept Biol, LIRP, São Paulo, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Morfol, São Paulo, BrazilFAPESP: 04/09219-6FAPESP: 06/05744-4FAPESP: 06/06749-0FAPESP: 06/04551-8FAPESP: 06/00545-3CNPq: 309632/2007-2CNPq: 303854/2009-0U.S. National Science Foundation: DEB-0443470Biomed Central Ltd.Universidade Estadual Paulista (Unesp)George Washington UnivNatl Museum Nat HistUniversidade de São Paulo (USP)Oliveira, Claudio [UNESP]Avelino, Gleisy S. [UNESP]Abe, Kelly T. [UNESP]Mariguela, Tatiane C. [UNESP]Benine, Ricardo C. [UNESP]Orti, GuillermoVari, Richard P.Correa e Castro, Ricardo M.2014-05-20T13:52:26Z2014-05-20T13:52:26Z2011-09-26info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article25application/pdfhttp://dx.doi.org/10.1186/1471-2148-11-275Bmc Evolutionary Biology. London: Biomed Central Ltd., v. 11, p. 25, 2011.1471-2148http://hdl.handle.net/11449/1873510.1186/1471-2148-11-275WOS:000295728400001WOS000295728400001.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBMC Evolutionary Biology3.0271,656info:eu-repo/semantics/openAccess2023-10-09T06:03:52Zoai:repositorio.unesp.br:11449/18735Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-10-09T06:03:52Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
title Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
spellingShingle Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
Oliveira, Claudio [UNESP]
title_short Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
title_full Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
title_fullStr Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
title_full_unstemmed Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
title_sort Phylogenetic relationships within the speciose family Characidae (Teleostei: Ostariophysi: Characiformes) based on multilocus analysis and extensive ingroup sampling
author Oliveira, Claudio [UNESP]
author_facet Oliveira, Claudio [UNESP]
Avelino, Gleisy S. [UNESP]
Abe, Kelly T. [UNESP]
Mariguela, Tatiane C. [UNESP]
Benine, Ricardo C. [UNESP]
Orti, Guillermo
Vari, Richard P.
Correa e Castro, Ricardo M.
author_role author
author2 Avelino, Gleisy S. [UNESP]
Abe, Kelly T. [UNESP]
Mariguela, Tatiane C. [UNESP]
Benine, Ricardo C. [UNESP]
Orti, Guillermo
Vari, Richard P.
Correa e Castro, Ricardo M.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
George Washington Univ
Natl Museum Nat Hist
Universidade de São Paulo (USP)
dc.contributor.author.fl_str_mv Oliveira, Claudio [UNESP]
Avelino, Gleisy S. [UNESP]
Abe, Kelly T. [UNESP]
Mariguela, Tatiane C. [UNESP]
Benine, Ricardo C. [UNESP]
Orti, Guillermo
Vari, Richard P.
Correa e Castro, Ricardo M.
description Background: With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical freshwater ecosystems. The composition, phylogeny, and classification of Characidae is currently uncertain, despite significant efforts based on analysis of morphological and molecular data. No consensus about the monophyly of this group or its position within the order Characiformes has been reached, challenged by the fact that many key studies to date have non-overlapping taxonomic representation and focus only on subsets of this diversity.Results: In the present study we propose a new definition of the family Characidae and a hypothesis of relationships for the Characiformes based on phylogenetic analysis of DNA sequences of two mitochondrial and three nuclear genes (4,680 base pairs). The sequences were obtained from 211 samples representing 166 genera distributed among all 18 recognized families in the order Characiformes, all 14 recognized subfamilies in the Characidae, plus 56 of the genera so far considered incertae sedis in the Characidae. The phylogeny obtained is robust, with most lineages significantly supported by posterior probabilities in Bayesian analysis, and high bootstrap values from maximum likelihood and parsimony analyses.Conclusion: A monophyletic assemblage strongly supported in all our phylogenetic analysis is herein defined as the Characidae and includes the characiform species lacking a supraorbital bone and with a derived position of the emergence of the hyoid artery from the anterior ceratohyal. To recognize this and several other monophyletic groups within characiforms we propose changes in the limits of several families to facilitate future studies in the Characiformes and particularly the Characidae. This work presents a new phylogenetic framework for a speciose and morphologically diverse group of freshwater fishes of significant ecological and evolutionary importance across the Neotropics and portions of Africa.
publishDate 2011
dc.date.none.fl_str_mv 2011-09-26
2014-05-20T13:52:26Z
2014-05-20T13:52:26Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1186/1471-2148-11-275
Bmc Evolutionary Biology. London: Biomed Central Ltd., v. 11, p. 25, 2011.
1471-2148
http://hdl.handle.net/11449/18735
10.1186/1471-2148-11-275
WOS:000295728400001
WOS000295728400001.pdf
url http://dx.doi.org/10.1186/1471-2148-11-275
http://hdl.handle.net/11449/18735
identifier_str_mv Bmc Evolutionary Biology. London: Biomed Central Ltd., v. 11, p. 25, 2011.
1471-2148
10.1186/1471-2148-11-275
WOS:000295728400001
WOS000295728400001.pdf
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language eng
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application/pdf
dc.publisher.none.fl_str_mv Biomed Central Ltd.
publisher.none.fl_str_mv Biomed Central Ltd.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
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