Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques

Detalhes bibliográficos
Autor(a) principal: Bellini, Marilanda Ferreira [UNESP]
Data de Publicação: 2010
Outros Autores: Silva, Ana Elizabete [UNESP], Varella-Garcia, Marileila
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S1415-47572010005000028
http://hdl.handle.net/11449/21443
Resumo: This review summarizes the chromosomal changes detected by molecular cytogenetic approaches in esophageal squamous cell carcinoma (ESCC), the ninth most common malignancy in the world. Whole genome analyses of ESCC cell lines and tumors indicated that the most frequent genomic gains occurred at 1, 2q, 3q, 5p, 6p, 7, 8q, 9q, 11q, 12p, 14q, 15q, 16, 17, 18p, 19q, 20q, 22q and X, with focal amplifications at 1q32, 2p16-22, 3q25-28, 5p13-15.3, 7p12-22, 7q21-22, 8q23-24.2, 9q34, 10q21, 11p11.2, 11q13, 13q32, 14q13-14, 14q21, 14q31-32, 15q22-26, 17p11.2, 18p11.2-11.3 and 20p11.2. Recurrent losses involved 3p, 4, 5q, 6q, 7q, 8p, 9, 10p, 12p, 13, 14p, 15p, 18, 19p, 20, 22, Xp and Y. Gains at 5p and 7q, and deletions at 4p, 9p, and 11q were significant prognostic factors for patients with ESCC. Gains at 6p and 20p, and losses at 10p and 10q were the most significant imbalances, both in primary carcinoma and in metastases, which suggested that these regions may harbor oncogenes and tumor suppressor genes. Gains at 12p and losses at 3p may be associated with poor relapse-free survival. The clinical applicability of these changes as markers for the diagnosis and prognosis of ESCC, or as molecular targets for personalized therapy should be evaluated.
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spelling Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniquesCGHesophageal carcinomaFishGenomic imbalancesMolecular cytogeneticThis review summarizes the chromosomal changes detected by molecular cytogenetic approaches in esophageal squamous cell carcinoma (ESCC), the ninth most common malignancy in the world. Whole genome analyses of ESCC cell lines and tumors indicated that the most frequent genomic gains occurred at 1, 2q, 3q, 5p, 6p, 7, 8q, 9q, 11q, 12p, 14q, 15q, 16, 17, 18p, 19q, 20q, 22q and X, with focal amplifications at 1q32, 2p16-22, 3q25-28, 5p13-15.3, 7p12-22, 7q21-22, 8q23-24.2, 9q34, 10q21, 11p11.2, 11q13, 13q32, 14q13-14, 14q21, 14q31-32, 15q22-26, 17p11.2, 18p11.2-11.3 and 20p11.2. Recurrent losses involved 3p, 4, 5q, 6q, 7q, 8p, 9, 10p, 12p, 13, 14p, 15p, 18, 19p, 20, 22, Xp and Y. Gains at 5p and 7q, and deletions at 4p, 9p, and 11q were significant prognostic factors for patients with ESCC. Gains at 6p and 20p, and losses at 10p and 10q were the most significant imbalances, both in primary carcinoma and in metastases, which suggested that these regions may harbor oncogenes and tumor suppressor genes. Gains at 12p and losses at 3p may be associated with poor relapse-free survival. The clinical applicability of these changes as markers for the diagnosis and prognosis of ESCC, or as molecular targets for personalized therapy should be evaluated.Universidade Estadual Paulista Júlio de Mesquita Filho Departamento de Biologia Laboratório de Citogenética e Biologia MolecularUniversity of Colorado Medicine/Medical Oncology, Health Sciences CenterUniversidade Estadual Paulista Júlio de Mesquita Filho Departamento de Biologia Laboratório de Citogenética e Biologia MolecularSociedade Brasileira de GenéticaUniversidade Estadual Paulista (Unesp)University of ColoradoBellini, Marilanda Ferreira [UNESP]Silva, Ana Elizabete [UNESP]Varella-Garcia, Marileila2014-05-20T14:00:40Z2014-05-20T14:00:40Z2010-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article205-213application/pdfhttp://dx.doi.org/10.1590/S1415-47572010005000028Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 33, n. 2, p. 205-213, 2010.1415-4757http://hdl.handle.net/11449/2144310.1590/S1415-47572010005000028S1415-47572010000200001WOS:000278958700001S1415-47572010000200001.pdfSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2023-11-29T06:13:24Zoai:repositorio.unesp.br:11449/21443Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:01:25.909665Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
title Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
spellingShingle Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
Bellini, Marilanda Ferreira [UNESP]
CGH
esophageal carcinoma
Fish
Genomic imbalances
Molecular cytogenetic
title_short Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
title_full Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
title_fullStr Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
title_full_unstemmed Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
title_sort Genomic imbalances in esophageal squamous cell carcinoma identified by molecular cytogenetic techniques
author Bellini, Marilanda Ferreira [UNESP]
author_facet Bellini, Marilanda Ferreira [UNESP]
Silva, Ana Elizabete [UNESP]
Varella-Garcia, Marileila
author_role author
author2 Silva, Ana Elizabete [UNESP]
Varella-Garcia, Marileila
author2_role author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
University of Colorado
dc.contributor.author.fl_str_mv Bellini, Marilanda Ferreira [UNESP]
Silva, Ana Elizabete [UNESP]
Varella-Garcia, Marileila
dc.subject.por.fl_str_mv CGH
esophageal carcinoma
Fish
Genomic imbalances
Molecular cytogenetic
topic CGH
esophageal carcinoma
Fish
Genomic imbalances
Molecular cytogenetic
description This review summarizes the chromosomal changes detected by molecular cytogenetic approaches in esophageal squamous cell carcinoma (ESCC), the ninth most common malignancy in the world. Whole genome analyses of ESCC cell lines and tumors indicated that the most frequent genomic gains occurred at 1, 2q, 3q, 5p, 6p, 7, 8q, 9q, 11q, 12p, 14q, 15q, 16, 17, 18p, 19q, 20q, 22q and X, with focal amplifications at 1q32, 2p16-22, 3q25-28, 5p13-15.3, 7p12-22, 7q21-22, 8q23-24.2, 9q34, 10q21, 11p11.2, 11q13, 13q32, 14q13-14, 14q21, 14q31-32, 15q22-26, 17p11.2, 18p11.2-11.3 and 20p11.2. Recurrent losses involved 3p, 4, 5q, 6q, 7q, 8p, 9, 10p, 12p, 13, 14p, 15p, 18, 19p, 20, 22, Xp and Y. Gains at 5p and 7q, and deletions at 4p, 9p, and 11q were significant prognostic factors for patients with ESCC. Gains at 6p and 20p, and losses at 10p and 10q were the most significant imbalances, both in primary carcinoma and in metastases, which suggested that these regions may harbor oncogenes and tumor suppressor genes. Gains at 12p and losses at 3p may be associated with poor relapse-free survival. The clinical applicability of these changes as markers for the diagnosis and prognosis of ESCC, or as molecular targets for personalized therapy should be evaluated.
publishDate 2010
dc.date.none.fl_str_mv 2010-01-01
2014-05-20T14:00:40Z
2014-05-20T14:00:40Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S1415-47572010005000028
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 33, n. 2, p. 205-213, 2010.
1415-4757
http://hdl.handle.net/11449/21443
10.1590/S1415-47572010005000028
S1415-47572010000200001
WOS:000278958700001
S1415-47572010000200001.pdf
url http://dx.doi.org/10.1590/S1415-47572010005000028
http://hdl.handle.net/11449/21443
identifier_str_mv Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 33, n. 2, p. 205-213, 2010.
1415-4757
10.1590/S1415-47572010005000028
S1415-47572010000200001
WOS:000278958700001
S1415-47572010000200001.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genetics and Molecular Biology
1.493
0,638
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 205-213
application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv SciELO
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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