Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration

Detalhes bibliográficos
Autor(a) principal: Gomes, Rafaela Lanças [UNESP]
Data de Publicação: 2023
Outros Autores: Sousa, Marília Caixeta [UNESP], Campos, Felipe Girotto [UNESP], Boaro, Carmen Sílvia Fernandes [UNESP], de Souza Passos, José Raimundo [UNESP], Ferreira, Gisela [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s11676-022-01557-3
http://hdl.handle.net/11449/247855
Resumo: Nitrogen (N) monitoring is essential in nurseries to ensure the production of high-quality seedlings. Near-infrared spectroscopy (NIRS) is an instantaneous, nondestructive method to monitor N. Spectral data such as NIRS can also provide the basis for developing a new vegetation spectral index (VSI). Here, we evaluated whether NIRS combined with statistical modeling can accurately detect early variations in N concentration in leaves of young plants of Annona emarginata and developed a new VSI for this task. Plants were grown in a hydroponics system with 0, 2.75, 5.5 or 11 mM N for 45 days. Then we measured gas exchange, chlorophylla fluorescence, and pigments in leaves; analyzed complete leaf nutrients, and recorded spectral data for leaves at 966 to 1685 nm using NIRS. With a statistical learning approach, the dimensionality of the spectral data was reduced, then models were generated using two classes (N deficiency, N) or four classes (0, 2.75, 5.5, 11 mM N). The best combination of techniques for dimensionality reduction and classification, respectively, was stepwise regression (PROC STEPDISC) and linear discriminant function. It was possible to detect N deficiency in seedlings leaves with 100% precision, and the four N concentrations with 93.55% accuracy before photosynthetic damage to the plant occurred. Thereby, NIRS combined with statistical modeling of multidimensional data is effective for detecting N variations in seedlings leaves of A. emarginata.
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spelling Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentrationDigital signatureFluorescence of chlorophyllaMineral nutrition of plantsNear-infrared spectroscopySpectral vegetation indexStatistical learningNitrogen (N) monitoring is essential in nurseries to ensure the production of high-quality seedlings. Near-infrared spectroscopy (NIRS) is an instantaneous, nondestructive method to monitor N. Spectral data such as NIRS can also provide the basis for developing a new vegetation spectral index (VSI). Here, we evaluated whether NIRS combined with statistical modeling can accurately detect early variations in N concentration in leaves of young plants of Annona emarginata and developed a new VSI for this task. Plants were grown in a hydroponics system with 0, 2.75, 5.5 or 11 mM N for 45 days. Then we measured gas exchange, chlorophylla fluorescence, and pigments in leaves; analyzed complete leaf nutrients, and recorded spectral data for leaves at 966 to 1685 nm using NIRS. With a statistical learning approach, the dimensionality of the spectral data was reduced, then models were generated using two classes (N deficiency, N) or four classes (0, 2.75, 5.5, 11 mM N). The best combination of techniques for dimensionality reduction and classification, respectively, was stepwise regression (PROC STEPDISC) and linear discriminant function. It was possible to detect N deficiency in seedlings leaves with 100% precision, and the four N concentrations with 93.55% accuracy before photosynthetic damage to the plant occurred. Thereby, NIRS combined with statistical modeling of multidimensional data is effective for detecting N variations in seedlings leaves of A. emarginata.Bioestatistic Plant Biology Parasitology and Zoology Department Bioscience Institute (IBB) Universidade Estadual Paulista (UNESP), São PauloBioestatistic Plant Biology Parasitology and Zoology Department Bioscience Institute (IBB) Universidade Estadual Paulista (UNESP), São PauloUniversidade Estadual Paulista (UNESP)Gomes, Rafaela Lanças [UNESP]Sousa, Marília Caixeta [UNESP]Campos, Felipe Girotto [UNESP]Boaro, Carmen Sílvia Fernandes [UNESP]de Souza Passos, José Raimundo [UNESP]Ferreira, Gisela [UNESP]2023-07-29T13:27:46Z2023-07-29T13:27:46Z2023-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article269-282http://dx.doi.org/10.1007/s11676-022-01557-3Journal of Forestry Research, v. 34, n. 1, p. 269-282, 2023.1993-06071007-662Xhttp://hdl.handle.net/11449/24785510.1007/s11676-022-01557-32-s2.0-85141680342Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Forestry Researchinfo:eu-repo/semantics/openAccess2023-07-29T13:27:46Zoai:repositorio.unesp.br:11449/247855Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:12:01.681627Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
title Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
spellingShingle Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
Gomes, Rafaela Lanças [UNESP]
Digital signature
Fluorescence of chlorophylla
Mineral nutrition of plants
Near-infrared spectroscopy
Spectral vegetation index
Statistical learning
title_short Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
title_full Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
title_fullStr Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
title_full_unstemmed Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
title_sort Near-infrared leaf reflectance modeling of Annona emarginata seedlings for early detection of variations in nitrogen concentration
author Gomes, Rafaela Lanças [UNESP]
author_facet Gomes, Rafaela Lanças [UNESP]
Sousa, Marília Caixeta [UNESP]
Campos, Felipe Girotto [UNESP]
Boaro, Carmen Sílvia Fernandes [UNESP]
de Souza Passos, José Raimundo [UNESP]
Ferreira, Gisela [UNESP]
author_role author
author2 Sousa, Marília Caixeta [UNESP]
Campos, Felipe Girotto [UNESP]
Boaro, Carmen Sílvia Fernandes [UNESP]
de Souza Passos, José Raimundo [UNESP]
Ferreira, Gisela [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv Gomes, Rafaela Lanças [UNESP]
Sousa, Marília Caixeta [UNESP]
Campos, Felipe Girotto [UNESP]
Boaro, Carmen Sílvia Fernandes [UNESP]
de Souza Passos, José Raimundo [UNESP]
Ferreira, Gisela [UNESP]
dc.subject.por.fl_str_mv Digital signature
Fluorescence of chlorophylla
Mineral nutrition of plants
Near-infrared spectroscopy
Spectral vegetation index
Statistical learning
topic Digital signature
Fluorescence of chlorophylla
Mineral nutrition of plants
Near-infrared spectroscopy
Spectral vegetation index
Statistical learning
description Nitrogen (N) monitoring is essential in nurseries to ensure the production of high-quality seedlings. Near-infrared spectroscopy (NIRS) is an instantaneous, nondestructive method to monitor N. Spectral data such as NIRS can also provide the basis for developing a new vegetation spectral index (VSI). Here, we evaluated whether NIRS combined with statistical modeling can accurately detect early variations in N concentration in leaves of young plants of Annona emarginata and developed a new VSI for this task. Plants were grown in a hydroponics system with 0, 2.75, 5.5 or 11 mM N for 45 days. Then we measured gas exchange, chlorophylla fluorescence, and pigments in leaves; analyzed complete leaf nutrients, and recorded spectral data for leaves at 966 to 1685 nm using NIRS. With a statistical learning approach, the dimensionality of the spectral data was reduced, then models were generated using two classes (N deficiency, N) or four classes (0, 2.75, 5.5, 11 mM N). The best combination of techniques for dimensionality reduction and classification, respectively, was stepwise regression (PROC STEPDISC) and linear discriminant function. It was possible to detect N deficiency in seedlings leaves with 100% precision, and the four N concentrations with 93.55% accuracy before photosynthetic damage to the plant occurred. Thereby, NIRS combined with statistical modeling of multidimensional data is effective for detecting N variations in seedlings leaves of A. emarginata.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T13:27:46Z
2023-07-29T13:27:46Z
2023-02-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s11676-022-01557-3
Journal of Forestry Research, v. 34, n. 1, p. 269-282, 2023.
1993-0607
1007-662X
http://hdl.handle.net/11449/247855
10.1007/s11676-022-01557-3
2-s2.0-85141680342
url http://dx.doi.org/10.1007/s11676-022-01557-3
http://hdl.handle.net/11449/247855
identifier_str_mv Journal of Forestry Research, v. 34, n. 1, p. 269-282, 2023.
1993-0607
1007-662X
10.1007/s11676-022-01557-3
2-s2.0-85141680342
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Forestry Research
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 269-282
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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