Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes

Detalhes bibliográficos
Autor(a) principal: Possebon, Fábio Sossai [UNESP]
Data de Publicação: 2021
Outros Autores: Alvarez, Marcus Vinicius Niz [UNESP], Ullmann, Leila Sabrina [UNESP], Araújo Jr, João Pessoa [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.foodcont.2021.108190
http://hdl.handle.net/11449/206271
Resumo: Food safety is essential to the development of a society, and foodborne diseases affect thousands of people worldwide every year. Among the main foodborne disease agents, Salmonella stands out as the most often associated with hospitalizations and deaths. Pork products are an important source of nutrients for the population, considered the most consumed meat in the world. Several reports revealed the presence of Multidrug-Resistant (MDR) Salmonella strains along the pork production chain, and the occurrence of elements that allow for the transference of resistance genes between bacterial populations is a public health concern. The present work aimed to evaluate the resistance genes and integrons in MDR Salmonella strains isolated from swine mesenteric lymph nodes. Nine strains had the genome sequenced with the Illumina NextSeq system. The results were submitted to the Resfinder server for evaluation of acquired genes and point mutations related to AMR and the presence and sequences of integrons were determined with a BLAST search. Different resistance genes for the same antimicrobial class were present in each strain. In two samples, resistance genes for olaquindox, a growth promoter outlawed in Brazil since 2004, were found. All observed phenotypic resistance had a genetic basis. Five isolates harbored class 1 integrons, which were classified in three distinct Integron Profiles (IPs). The IPs were also reported in animal source food and human clinical isolates. The diversity of resistance genes for the same antimicrobial class in each strain and the presence of Class 1 Integrons, reflect the high selection pressure that these bacterial lineages face along the pork production chain, and reinforces the role of animal production as a reservoir and disseminator of AMR genes.
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spelling Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodesIntegronsMDRResistance profileSalmonellaWGSFood safety is essential to the development of a society, and foodborne diseases affect thousands of people worldwide every year. Among the main foodborne disease agents, Salmonella stands out as the most often associated with hospitalizations and deaths. Pork products are an important source of nutrients for the population, considered the most consumed meat in the world. Several reports revealed the presence of Multidrug-Resistant (MDR) Salmonella strains along the pork production chain, and the occurrence of elements that allow for the transference of resistance genes between bacterial populations is a public health concern. The present work aimed to evaluate the resistance genes and integrons in MDR Salmonella strains isolated from swine mesenteric lymph nodes. Nine strains had the genome sequenced with the Illumina NextSeq system. The results were submitted to the Resfinder server for evaluation of acquired genes and point mutations related to AMR and the presence and sequences of integrons were determined with a BLAST search. Different resistance genes for the same antimicrobial class were present in each strain. In two samples, resistance genes for olaquindox, a growth promoter outlawed in Brazil since 2004, were found. All observed phenotypic resistance had a genetic basis. Five isolates harbored class 1 integrons, which were classified in three distinct Integron Profiles (IPs). The IPs were also reported in animal source food and human clinical isolates. The diversity of resistance genes for the same antimicrobial class in each strain and the presence of Class 1 Integrons, reflect the high selection pressure that these bacterial lineages face along the pork production chain, and reinforces the role of animal production as a reservoir and disseminator of AMR genes.São Paulo State University (Unesp) Institute for Biotechnology, Tecomarias Av.São Paulo State University (Unesp) Institute for Biotechnology, Tecomarias Av.Universidade Estadual Paulista (Unesp)Possebon, Fábio Sossai [UNESP]Alvarez, Marcus Vinicius Niz [UNESP]Ullmann, Leila Sabrina [UNESP]Araújo Jr, João Pessoa [UNESP]2021-06-25T10:29:21Z2021-06-25T10:29:21Z2021-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.foodcont.2021.108190Food Control, v. 128.0956-7135http://hdl.handle.net/11449/20627110.1016/j.foodcont.2021.1081902-s2.0-85105065274Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengFood Controlinfo:eu-repo/semantics/openAccess2021-10-23T02:54:13Zoai:repositorio.unesp.br:11449/206271Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T02:54:13Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
title Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
spellingShingle Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
Possebon, Fábio Sossai [UNESP]
Integrons
MDR
Resistance profile
Salmonella
WGS
title_short Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
title_full Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
title_fullStr Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
title_full_unstemmed Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
title_sort Antimicrobial resistance genes and class 1 integrons in MDR Salmonella strains isolated from swine lymph nodes
author Possebon, Fábio Sossai [UNESP]
author_facet Possebon, Fábio Sossai [UNESP]
Alvarez, Marcus Vinicius Niz [UNESP]
Ullmann, Leila Sabrina [UNESP]
Araújo Jr, João Pessoa [UNESP]
author_role author
author2 Alvarez, Marcus Vinicius Niz [UNESP]
Ullmann, Leila Sabrina [UNESP]
Araújo Jr, João Pessoa [UNESP]
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Possebon, Fábio Sossai [UNESP]
Alvarez, Marcus Vinicius Niz [UNESP]
Ullmann, Leila Sabrina [UNESP]
Araújo Jr, João Pessoa [UNESP]
dc.subject.por.fl_str_mv Integrons
MDR
Resistance profile
Salmonella
WGS
topic Integrons
MDR
Resistance profile
Salmonella
WGS
description Food safety is essential to the development of a society, and foodborne diseases affect thousands of people worldwide every year. Among the main foodborne disease agents, Salmonella stands out as the most often associated with hospitalizations and deaths. Pork products are an important source of nutrients for the population, considered the most consumed meat in the world. Several reports revealed the presence of Multidrug-Resistant (MDR) Salmonella strains along the pork production chain, and the occurrence of elements that allow for the transference of resistance genes between bacterial populations is a public health concern. The present work aimed to evaluate the resistance genes and integrons in MDR Salmonella strains isolated from swine mesenteric lymph nodes. Nine strains had the genome sequenced with the Illumina NextSeq system. The results were submitted to the Resfinder server for evaluation of acquired genes and point mutations related to AMR and the presence and sequences of integrons were determined with a BLAST search. Different resistance genes for the same antimicrobial class were present in each strain. In two samples, resistance genes for olaquindox, a growth promoter outlawed in Brazil since 2004, were found. All observed phenotypic resistance had a genetic basis. Five isolates harbored class 1 integrons, which were classified in three distinct Integron Profiles (IPs). The IPs were also reported in animal source food and human clinical isolates. The diversity of resistance genes for the same antimicrobial class in each strain and the presence of Class 1 Integrons, reflect the high selection pressure that these bacterial lineages face along the pork production chain, and reinforces the role of animal production as a reservoir and disseminator of AMR genes.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25T10:29:21Z
2021-06-25T10:29:21Z
2021-10-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.foodcont.2021.108190
Food Control, v. 128.
0956-7135
http://hdl.handle.net/11449/206271
10.1016/j.foodcont.2021.108190
2-s2.0-85105065274
url http://dx.doi.org/10.1016/j.foodcont.2021.108190
http://hdl.handle.net/11449/206271
identifier_str_mv Food Control, v. 128.
0956-7135
10.1016/j.foodcont.2021.108190
2-s2.0-85105065274
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Food Control
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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