Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.livsci.2017.07.008 http://hdl.handle.net/11449/174937 |
Resumo: | Early pregnancy probability (P16) in heifers is a trait of high economic value for beef cattle production. Early pregnancy is defined based on the conception and calving of a heifer given that the animal had entered the breeding season at about 16 months of age and is considered a strong predictor of puberty in Nellore cattle. The aim of this study was to identify polymorphisms in the protein phosphatase 3 – catalytic subunit, alpha isozyme (PPP3CA) and fatty acid-binding proteins 4 (FABP4) genes, which have been associated with P16. The exon regions of the candidate genes were sequenced in 380 heifers. Two polymorphisms were detected in PPP3CA and 13 in FABP4. A deletion (rs134413439) was identified in the FABP4 gene in all samples, which could be a variation that occurs across breeds since the reference genome is from a Hereford cow. Two SNPs in the FABP4 gene were associated with P16 after Bonferroni correction. However, none of the haplotypes exerted a significant effect (P > 0.05). This study showed that the PPP3CA and FABP4 genes are polymorphic in Nellore cattle. Furthermore, the FABP4 gene was found to be associated with early pregnancy in heifers, reinforcing the contribution of lipid metabolism to reproduction. |
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Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifersBos taurus indicusFertility traitsLipid metabolismPubertySNPEarly pregnancy probability (P16) in heifers is a trait of high economic value for beef cattle production. Early pregnancy is defined based on the conception and calving of a heifer given that the animal had entered the breeding season at about 16 months of age and is considered a strong predictor of puberty in Nellore cattle. The aim of this study was to identify polymorphisms in the protein phosphatase 3 – catalytic subunit, alpha isozyme (PPP3CA) and fatty acid-binding proteins 4 (FABP4) genes, which have been associated with P16. The exon regions of the candidate genes were sequenced in 380 heifers. Two polymorphisms were detected in PPP3CA and 13 in FABP4. A deletion (rs134413439) was identified in the FABP4 gene in all samples, which could be a variation that occurs across breeds since the reference genome is from a Hereford cow. Two SNPs in the FABP4 gene were associated with P16 after Bonferroni correction. However, none of the haplotypes exerted a significant effect (P > 0.05). This study showed that the PPP3CA and FABP4 genes are polymorphic in Nellore cattle. Furthermore, the FABP4 gene was found to be associated with early pregnancy in heifers, reinforcing the contribution of lipid metabolism to reproduction.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Departamento de Zootecnia Faculdade de Ciências Agrárias e Veterinárias UNESP-Univ Estadual PaulistaDepartamento de Zootecnia Escola de Medicina Veterinária e Zootecnia Universidade Federal da BahiaDepartamento de Ecologia Zoologia e Genética Universidade Federal de PelotasDepartamento de Zootecnia Faculdade de Ciências Agrárias e Veterinárias UNESP-Univ Estadual PaulistaFAPESP: #2009/16118-5FAPESP: #2013/08011-1CNPq: #559631/2009-0Universidade Estadual Paulista (Unesp)Universidade Federal da Bahia (UFBA)Universidade Federal de PelotasBarbero, M. M.D. [UNESP]Santos, D. J.A. [UNESP]Takada, L. [UNESP]de Camargo, G. M.F.Freitas, A. C. [UNESP]Diaz, I. S.D.P. [UNESP]de Souza, F. R.P.Tonhati, H. [UNESP]Albuquerque, L. G. [UNESP]Oliveira, H. N. [UNESP]2018-12-11T17:13:32Z2018-12-11T17:13:32Z2017-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article76-81application/pdfhttp://dx.doi.org/10.1016/j.livsci.2017.07.008Livestock Science, v. 203, p. 76-81.1871-1413http://hdl.handle.net/11449/17493710.1016/j.livsci.2017.07.0082-s2.0-850251489292-s2.0-85025148929.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengLivestock Science0,730info:eu-repo/semantics/openAccess2024-06-07T18:42:34Zoai:repositorio.unesp.br:11449/174937Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:23:13.383489Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
title |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
spellingShingle |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers Barbero, M. M.D. [UNESP] Bos taurus indicus Fertility traits Lipid metabolism Puberty SNP |
title_short |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
title_full |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
title_fullStr |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
title_full_unstemmed |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
title_sort |
Prospecting polymorphisms in the PPP3CA and FABP4 genes and their association with early pregnancy probability in Nellore heifers |
author |
Barbero, M. M.D. [UNESP] |
author_facet |
Barbero, M. M.D. [UNESP] Santos, D. J.A. [UNESP] Takada, L. [UNESP] de Camargo, G. M.F. Freitas, A. C. [UNESP] Diaz, I. S.D.P. [UNESP] de Souza, F. R.P. Tonhati, H. [UNESP] Albuquerque, L. G. [UNESP] Oliveira, H. N. [UNESP] |
author_role |
author |
author2 |
Santos, D. J.A. [UNESP] Takada, L. [UNESP] de Camargo, G. M.F. Freitas, A. C. [UNESP] Diaz, I. S.D.P. [UNESP] de Souza, F. R.P. Tonhati, H. [UNESP] Albuquerque, L. G. [UNESP] Oliveira, H. N. [UNESP] |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Federal da Bahia (UFBA) Universidade Federal de Pelotas |
dc.contributor.author.fl_str_mv |
Barbero, M. M.D. [UNESP] Santos, D. J.A. [UNESP] Takada, L. [UNESP] de Camargo, G. M.F. Freitas, A. C. [UNESP] Diaz, I. S.D.P. [UNESP] de Souza, F. R.P. Tonhati, H. [UNESP] Albuquerque, L. G. [UNESP] Oliveira, H. N. [UNESP] |
dc.subject.por.fl_str_mv |
Bos taurus indicus Fertility traits Lipid metabolism Puberty SNP |
topic |
Bos taurus indicus Fertility traits Lipid metabolism Puberty SNP |
description |
Early pregnancy probability (P16) in heifers is a trait of high economic value for beef cattle production. Early pregnancy is defined based on the conception and calving of a heifer given that the animal had entered the breeding season at about 16 months of age and is considered a strong predictor of puberty in Nellore cattle. The aim of this study was to identify polymorphisms in the protein phosphatase 3 – catalytic subunit, alpha isozyme (PPP3CA) and fatty acid-binding proteins 4 (FABP4) genes, which have been associated with P16. The exon regions of the candidate genes were sequenced in 380 heifers. Two polymorphisms were detected in PPP3CA and 13 in FABP4. A deletion (rs134413439) was identified in the FABP4 gene in all samples, which could be a variation that occurs across breeds since the reference genome is from a Hereford cow. Two SNPs in the FABP4 gene were associated with P16 after Bonferroni correction. However, none of the haplotypes exerted a significant effect (P > 0.05). This study showed that the PPP3CA and FABP4 genes are polymorphic in Nellore cattle. Furthermore, the FABP4 gene was found to be associated with early pregnancy in heifers, reinforcing the contribution of lipid metabolism to reproduction. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-09-01 2018-12-11T17:13:32Z 2018-12-11T17:13:32Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.livsci.2017.07.008 Livestock Science, v. 203, p. 76-81. 1871-1413 http://hdl.handle.net/11449/174937 10.1016/j.livsci.2017.07.008 2-s2.0-85025148929 2-s2.0-85025148929.pdf |
url |
http://dx.doi.org/10.1016/j.livsci.2017.07.008 http://hdl.handle.net/11449/174937 |
identifier_str_mv |
Livestock Science, v. 203, p. 76-81. 1871-1413 10.1016/j.livsci.2017.07.008 2-s2.0-85025148929 2-s2.0-85025148929.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Livestock Science 0,730 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
76-81 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129061240700928 |